RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
POLR2J3-204ENST00000486319 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
POLR2J3-204ENST00000486319 PROM2Q8N271 834 aa18.84■□□□□ 0.61
POLR2J3-204ENST00000486319 PLIN1O60240 522 aa18.84■□□□□ 0.61
POLR2J3-204ENST00000486319 R3HDM1Q15032 1099 aaKnown RBP18.84■□□□□ 0.61
POLR2J3-204ENST00000486319 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
POLR2J3-204ENST00000486319 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
POLR2J3-204ENST00000486319 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
POLR2J3-204ENST00000486319 NHSQ6T4R5 1651 aa18.81■□□□□ 0.6
POLR2J3-204ENST00000486319 GNAI1P63096 354 aa18.81■□□□□ 0.6
POLR2J3-204ENST00000486319 NKX1-1Q15270 411 aaPredicted RBP18.81■□□□□ 0.6
POLR2J3-204ENST00000486319 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
POLR2J3-204ENST00000486319 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
POLR2J3-204ENST00000486319 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
POLR2J3-204ENST00000486319 KAT6BQ8WYB5 2073 aa18.81■□□□□ 0.6
POLR2J3-204ENST00000486319 PHKG2P15735 406 aa18.8■□□□□ 0.6
POLR2J3-204ENST00000486319 EXOC6Q8TAG9 804 aa18.8■□□□□ 0.6
POLR2J3-204ENST00000486319 IFT57Q9NWB7 429 aa18.8■□□□□ 0.6
POLR2J3-204ENST00000486319 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
POLR2J3-204ENST00000486319 BCAR3O75815 825 aa18.79■□□□□ 0.6
POLR2J3-204ENST00000486319 RARSP54136 660 aaKnown RBP18.79■□□□□ 0.6
POLR2J3-204ENST00000486319 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
POLR2J3-204ENST00000486319 CCDC136Q96JN2 1154 aa18.79■□□□□ 0.6
POLR2J3-204ENST00000486319 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
POLR2J3-204ENST00000486319 MPRIPQ6WCQ1 1025 aa18.79■□□□□ 0.6
POLR2J3-204ENST00000486319 GAS2L2Q8NHY3 880 aa18.79■□□□□ 0.6
POLR2J3-204ENST00000486319 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
POLR2J3-204ENST00000486319 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
POLR2J3-204ENST00000486319 CRBNQ96SW2 442 aa18.77■□□□□ 0.6
POLR2J3-204ENST00000486319 RGPD3A6NKT7 1758 aaPredicted RBP18.76■□□□□ 0.59
POLR2J3-204ENST00000486319 ZNF853P0CG23 659 aa18.76■□□□□ 0.59
POLR2J3-204ENST00000486319 PDE3AQ14432 1141 aa18.76■□□□□ 0.59
POLR2J3-204ENST00000486319 RGPD4Q7Z3J3 1758 aa18.76■□□□□ 0.59
POLR2J3-204ENST00000486319 PKD1L3Q7Z443 1732 aa18.76■□□□□ 0.59
POLR2J3-204ENST00000486319 RREB1Q92766 1687 aa18.76■□□□□ 0.59
POLR2J3-204ENST00000486319 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 MTHFSDQ2M296 383 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 C1orf141Q5JVX7 400 aa18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 SLC27A3Q5K4L6 730 aa18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 ANO8Q9HCE9 1232 aaPredicted RBP18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
POLR2J3-204ENST00000486319 C20orf194Q5TEA3 1177 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 PIGBQ92521 554 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 LRRC4BQ9NT99 713 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 STK32BQ9NY57 414 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 BTAF1O14981 1849 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 NUP188Q5SRE5 1749 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 DOT1LQ8TEK3 1739 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 RTF1Q92541 710 aaKnown RBP18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 DCAF5Q96JK2 942 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
POLR2J3-204ENST00000486319 KCNQ4P56696 695 aa18.72■□□□□ 0.59
POLR2J3-204ENST00000486319 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
POLR2J3-204ENST00000486319 SLC15A2Q16348 729 aa18.72■□□□□ 0.59
POLR2J3-204ENST00000486319 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
POLR2J3-204ENST00000486319 ERVV-2B6SEH9 535 aa18.71■□□□□ 0.59
POLR2J3-204ENST00000486319 ALDH1L2Q3SY69 923 aa18.71■□□□□ 0.59
POLR2J3-204ENST00000486319 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
POLR2J3-204ENST00000486319 CCNL1Q9UK58 526 aaPredicted RBP18.71■□□□□ 0.59
POLR2J3-204ENST00000486319 FRAT1Q92837 279 aaPredicted RBP18.7■□□□□ 0.58
POLR2J3-204ENST00000486319 MS4A1P11836 297 aa18.69■□□□□ 0.58
POLR2J3-204ENST00000486319 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
POLR2J3-204ENST00000486319 MCM10Q7L590 875 aa18.69■□□□□ 0.58
POLR2J3-204ENST00000486319 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
POLR2J3-204ENST00000486319 PALLDQ8WX93 1383 aa18.69■□□□□ 0.58
POLR2J3-204ENST00000486319 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
POLR2J3-204ENST00000486319 CABP4P57796 275 aa18.69■□□□□ 0.58
POLR2J3-204ENST00000486319 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
POLR2J3-204ENST00000486319 CHL1O00533 1208 aa18.68■□□□□ 0.58
POLR2J3-204ENST00000486319 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
POLR2J3-204ENST00000486319 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
POLR2J3-204ENST00000486319 ASAP1Q9ULH1 1129 aa18.68■□□□□ 0.58
POLR2J3-204ENST00000486319 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
POLR2J3-204ENST00000486319 HMGB2P26583 209 aaKnown RBP18.67■□□□□ 0.58
POLR2J3-204ENST00000486319 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
POLR2J3-204ENST00000486319 KIF16BQ96L93 1317 aa18.66■□□□□ 0.58
POLR2J3-204ENST00000486319 VAMP4O75379 141 aa18.66■□□□□ 0.58
POLR2J3-204ENST00000486319 ZNF827Q17R98 1081 aa18.66■□□□□ 0.58
POLR2J3-204ENST00000486319 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
POLR2J3-204ENST00000486319 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
POLR2J3-204ENST00000486319 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
POLR2J3-204ENST00000486319 AAMPQ13685 434 aa18.65■□□□□ 0.58
POLR2J3-204ENST00000486319 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
POLR2J3-204ENST00000486319 ATG3Q9NT62 314 aa18.65■□□□□ 0.58
POLR2J3-204ENST00000486319 TOGARAM1Q9Y4F4 1720 aa18.65■□□□□ 0.58
POLR2J3-204ENST00000486319 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.58
POLR2J3-204ENST00000486319 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.58
POLR2J3-204ENST00000486319 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.58
POLR2J3-204ENST00000486319 TFCP2L1Q9NZI6 479 aa18.64■□□□□ 0.58
POLR2J3-204ENST00000486319 LOC102724428A0A0B4J2F2 783 aa18.64■□□□□ 0.57
POLR2J3-204ENST00000486319 SIK1P57059 783 aa18.64■□□□□ 0.57
POLR2J3-204ENST00000486319 LGR6Q9HBX8 967 aa18.64■□□□□ 0.57
POLR2J3-204ENST00000486319 PANK1Q8TE04 598 aa18.63■□□□□ 0.57
POLR2J3-204ENST00000486319 SPON1Q9HCB6 807 aa18.63■□□□□ 0.57
POLR2J3-204ENST00000486319 BABAM1Q9NWV8 329 aa18.63■□□□□ 0.57
POLR2J3-204ENST00000486319 RNMTO43148 476 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms