RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
SHROOM3-207ENST00000485780 CICQ96RK0 1608 aaPredicted RBP12.35□□□□□ -0.43
SHROOM3-207ENST00000485780 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
SHROOM3-207ENST00000485780 MAPK8IP3Q9UPT6 1336 aa12.35□□□□□ -0.43
SHROOM3-207ENST00000485780 UBR2Q8IWV8 1755 aa12.34□□□□□ -0.43
SHROOM3-207ENST00000485780 HTATSF1O43719 755 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-207ENST00000485780 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
SHROOM3-207ENST00000485780 C1orf141Q5JVX7 400 aa12.34□□□□□ -0.43
SHROOM3-207ENST00000485780 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
SHROOM3-207ENST00000485780 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
SHROOM3-207ENST00000485780 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
SHROOM3-207ENST00000485780 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-207ENST00000485780 KDM3BQ7LBC6 1761 aa12.33□□□□□ -0.44
SHROOM3-207ENST00000485780 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
SHROOM3-207ENST00000485780 RNMTO43148 476 aaKnown RBP12.32□□□□□ -0.44
SHROOM3-207ENST00000485780 NEFMP07197 916 aa12.32□□□□□ -0.44
SHROOM3-207ENST00000485780 TMPOP42166 694 aaKnown RBP12.32□□□□□ -0.44
SHROOM3-207ENST00000485780 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
SHROOM3-207ENST00000485780 LRRC4BQ9NT99 713 aa12.32□□□□□ -0.44
SHROOM3-207ENST00000485780 ZNF827Q17R98 1081 aa12.31□□□□□ -0.44
SHROOM3-207ENST00000485780 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
SHROOM3-207ENST00000485780 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
SHROOM3-207ENST00000485780 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
SHROOM3-207ENST00000485780 PDGFDQ9GZP0 370 aaPredicted RBP12.3□□□□□ -0.44
SHROOM3-207ENST00000485780 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
SHROOM3-207ENST00000485780 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
SHROOM3-207ENST00000485780 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
SHROOM3-207ENST00000485780 MTFR1LQ9H019 292 aa12.29□□□□□ -0.44
SHROOM3-207ENST00000485780 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
SHROOM3-207ENST00000485780 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
SHROOM3-207ENST00000485780 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
SHROOM3-207ENST00000485780 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 APAF1O14727 1248 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 HMGB2P26583 209 aaKnown RBP12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 KCNQ4P56696 695 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 FAM9BQ8IZU0 186 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 PIGBQ92521 554 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 SMARCC1Q92922 1105 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
SHROOM3-207ENST00000485780 C5P01031 1676 aa12.27□□□□□ -0.45
SHROOM3-207ENST00000485780 RIPK4P57078 832 aa12.27□□□□□ -0.45
SHROOM3-207ENST00000485780 NGEFQ8N5V2 710 aa12.27□□□□□ -0.45
SHROOM3-207ENST00000485780 AKT1S1Q96B36 256 aa12.27□□□□□ -0.45
SHROOM3-207ENST00000485780 TMOD3Q9NYL9 352 aa12.27□□□□□ -0.45
SHROOM3-207ENST00000485780 TJP1Q07157 1748 aa12.27□□□□□ -0.45
SHROOM3-207ENST00000485780 MCM10Q7L590 875 aa12.26□□□□□ -0.45
SHROOM3-207ENST00000485780 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
SHROOM3-207ENST00000485780 PTGER2P43116 358 aa12.25□□□□□ -0.45
SHROOM3-207ENST00000485780 CABP4P57796 275 aa12.25□□□□□ -0.45
SHROOM3-207ENST00000485780 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
SHROOM3-207ENST00000485780 SLC16A10Q8TF71 515 aa12.25□□□□□ -0.45
SHROOM3-207ENST00000485780 RRP7AQ9Y3A4 280 aaKnown RBP12.25□□□□□ -0.45
SHROOM3-207ENST00000485780 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
SHROOM3-207ENST00000485780 POLD1P28340 1107 aa12.24□□□□□ -0.45
SHROOM3-207ENST00000485780 TEFQ10587 303 aa12.24□□□□□ -0.45
SHROOM3-207ENST00000485780 DCTN1Q14203 1278 aa12.24□□□□□ -0.45
SHROOM3-207ENST00000485780 QSER1Q2KHR3 1735 aa12.24□□□□□ -0.45
SHROOM3-207ENST00000485780 PNPLA7Q6ZV29 1317 aa12.24□□□□□ -0.45
SHROOM3-207ENST00000485780 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
SHROOM3-207ENST00000485780 ATG3Q9NT62 314 aa12.24□□□□□ -0.45
SHROOM3-207ENST00000485780 AK7Q96M32 723 aa12.23□□□□□ -0.45
SHROOM3-207ENST00000485780 ARXQ96QS3 562 aa12.23□□□□□ -0.45
SHROOM3-207ENST00000485780 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-207ENST00000485780 BABAM1Q9NWV8 329 aa12.23□□□□□ -0.45
SHROOM3-207ENST00000485780 ASAP1Q9ULH1 1129 aa12.23□□□□□ -0.45
SHROOM3-207ENST00000485780 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
SHROOM3-207ENST00000485780 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
SHROOM3-207ENST00000485780 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
SHROOM3-207ENST00000485780 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
SHROOM3-207ENST00000485780 IL16Q14005 1332 aa12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 ZNF853P0CG23 659 aa12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 TAF7Q15545 349 aaPredicted RBP12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 ZNF790Q6PG37 636 aa12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 FLAD1Q8NFF5 587 aa12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
SHROOM3-207ENST00000485780 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
SHROOM3-207ENST00000485780 MYH14Q7Z406 1995 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-207ENST00000485780 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
SHROOM3-207ENST00000485780 CHL1O00533 1208 aa12.2□□□□□ -0.46
SHROOM3-207ENST00000485780 SIK1P57059 783 aa12.2□□□□□ -0.46
SHROOM3-207ENST00000485780 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
SHROOM3-207ENST00000485780 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
SHROOM3-207ENST00000485780 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 SLC39A6Q13433 755 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 COL23A1Q86Y22 540 aaPredicted RBP12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
SHROOM3-207ENST00000485780 PHF14O94880 888 aa12.18□□□□□ -0.46
SHROOM3-207ENST00000485780 WDR63Q8IWG1 891 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms