RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 ABCC6O95255 1503 aa12.32□□□□□ -0.44
DDX39B-221ENST00000484566 LHX8Q68G74 356 aa12.31□□□□□ -0.44
DDX39B-221ENST00000484566 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
DDX39B-221ENST00000484566 CABP1Q9NZU7 370 aa12.31□□□□□ -0.44
DDX39B-221ENST00000484566 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
DDX39B-221ENST00000484566 BTAF1O14981 1849 aa12.3□□□□□ -0.44
DDX39B-221ENST00000484566 HSPA1AP0DMV8 641 aaKnown RBP12.29□□□□□ -0.44
DDX39B-221ENST00000484566 HSPA1BP0DMV9 641 aaKnown RBP12.29□□□□□ -0.44
DDX39B-221ENST00000484566 POLD1P28340 1107 aa12.29□□□□□ -0.44
DDX39B-221ENST00000484566 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
DDX39B-221ENST00000484566 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
DDX39B-221ENST00000484566 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
DDX39B-221ENST00000484566 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
DDX39B-221ENST00000484566 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
DDX39B-221ENST00000484566 NBPF1Q3BBV0 1214 aa12.27□□□□□ -0.45
DDX39B-221ENST00000484566 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.45
DDX39B-221ENST00000484566 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
DDX39B-221ENST00000484566 NFAT5O94916 1531 aa12.27□□□□□ -0.45
DDX39B-221ENST00000484566 ZNF827Q17R98 1081 aa12.26□□□□□ -0.45
DDX39B-221ENST00000484566 PDCD7Q8N8D1 485 aaKnown RBP12.26□□□□□ -0.45
DDX39B-221ENST00000484566 SLC16A10Q8TF71 515 aa12.26□□□□□ -0.45
DDX39B-221ENST00000484566 TTC21BQ7Z4L5 1316 aa12.26□□□□□ -0.45
DDX39B-221ENST00000484566 EVC2Q86UK5 1308 aa12.26□□□□□ -0.45
DDX39B-221ENST00000484566 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
DDX39B-221ENST00000484566 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
DDX39B-221ENST00000484566 IL2RBP14784 551 aa12.24□□□□□ -0.45
DDX39B-221ENST00000484566 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
DDX39B-221ENST00000484566 ERBB3P21860 1342 aa12.23□□□□□ -0.45
DDX39B-221ENST00000484566 MLLT1Q03111 559 aaPredicted RBP12.23□□□□□ -0.45
DDX39B-221ENST00000484566 SLC27A3Q5K4L6 730 aa12.23□□□□□ -0.45
DDX39B-221ENST00000484566 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
DDX39B-221ENST00000484566 LTN1O94822 1766 aa12.23□□□□□ -0.45
DDX39B-221ENST00000484566 FBXO22Q8NEZ5 403 aa12.22□□□□□ -0.45
DDX39B-221ENST00000484566 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
DDX39B-221ENST00000484566 MON2Q7Z3U7 1717 aa12.22□□□□□ -0.45
DDX39B-221ENST00000484566 KTN1Q86UP2 1357 aaKnown RBP12.21□□□□□ -0.45
DDX39B-221ENST00000484566 PNPLA7Q6ZV29 1317 aa12.21□□□□□ -0.45
DDX39B-221ENST00000484566 RBM46Q8TBY0 533 aaKnown RBP12.21□□□□□ -0.45
DDX39B-221ENST00000484566 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
DDX39B-221ENST00000484566 TFCP2L1Q9NZI6 479 aa12.21□□□□□ -0.45
DDX39B-221ENST00000484566 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
DDX39B-221ENST00000484566 TNRC18O15417 2968 aaPredicted RBP12.2□□□□□ -0.46
DDX39B-221ENST00000484566 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
DDX39B-221ENST00000484566 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
DDX39B-221ENST00000484566 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
DDX39B-221ENST00000484566 RGS19P49795 217 aa12.19□□□□□ -0.46
DDX39B-221ENST00000484566 FSTL1Q12841 308 aa12.18□□□□□ -0.46
DDX39B-221ENST00000484566 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-221ENST00000484566 ANKRD24Q8TF21 1146 aa12.18□□□□□ -0.46
DDX39B-221ENST00000484566 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
DDX39B-221ENST00000484566 FAM208AQ9UK61 1670 aaKnown RBP12.18□□□□□ -0.46
DDX39B-221ENST00000484566 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
DDX39B-221ENST00000484566 PDE4DIPQ5VU43 2346 aa12.17□□□□□ -0.46
DDX39B-221ENST00000484566 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
DDX39B-221ENST00000484566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX39B-221ENST00000484566 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-221ENST00000484566 LY75O60449 1722 aa12.17□□□□□ -0.46
DDX39B-221ENST00000484566 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
DDX39B-221ENST00000484566 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
DDX39B-221ENST00000484566 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
DDX39B-221ENST00000484566 ROCK2O75116 1388 aaKnown RBP12.15□□□□□ -0.46
DDX39B-221ENST00000484566 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
DDX39B-221ENST00000484566 NME9Q86XW9 330 aa12.14□□□□□ -0.47
DDX39B-221ENST00000484566 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
DDX39B-221ENST00000484566 NMRK2Q9NPI5 230 aa12.14□□□□□ -0.47
DDX39B-221ENST00000484566 PRDM10Q9NQV6 1147 aa12.14□□□□□ -0.47
DDX39B-221ENST00000484566 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
DDX39B-221ENST00000484566 KCNQ4P56696 695 aa12.13□□□□□ -0.47
DDX39B-221ENST00000484566 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
DDX39B-221ENST00000484566 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
DDX39B-221ENST00000484566 HDGFL2Q7Z4V5 671 aaPredicted RBP12.12□□□□□ -0.47
DDX39B-221ENST00000484566 ABHD8Q96I13 439 aa12.12□□□□□ -0.47
DDX39B-221ENST00000484566 USP47Q96K76 1375 aa12.12□□□□□ -0.47
DDX39B-221ENST00000484566 SBNO2Q9Y2G9 1366 aa12.12□□□□□ -0.47
DDX39B-221ENST00000484566 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
DDX39B-221ENST00000484566 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
DDX39B-221ENST00000484566 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
DDX39B-221ENST00000484566 C5P01031 1676 aa12.1□□□□□ -0.47
DDX39B-221ENST00000484566 CD163L1Q9NR16 1453 aa12.1□□□□□ -0.47
DDX39B-221ENST00000484566 NSD2O96028 1365 aa12.1□□□□□ -0.47
DDX39B-221ENST00000484566 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
DDX39B-221ENST00000484566 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
DDX39B-221ENST00000484566 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-221ENST00000484566 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
DDX39B-221ENST00000484566 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-221ENST00000484566 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
DDX39B-221ENST00000484566 C16orf71Q8IYS4 520 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-221ENST00000484566 FLAD1Q8NFF5 587 aa12.09□□□□□ -0.47
DDX39B-221ENST00000484566 IP6K1Q92551 441 aa12.09□□□□□ -0.47
DDX39B-221ENST00000484566 L3MBTL2Q969R5 705 aa12.09□□□□□ -0.47
DDX39B-221ENST00000484566 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-221ENST00000484566 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
DDX39B-221ENST00000484566 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
DDX39B-221ENST00000484566 CFAP44Q96MT7 982 aa12.08□□□□□ -0.48
DDX39B-221ENST00000484566 MEGF6O75095 1541 aa12.07□□□□□ -0.48
DDX39B-221ENST00000484566 FOXN1O15353 648 aa12.07□□□□□ -0.48
DDX39B-221ENST00000484566 PPP1R37O75864 691 aa12.07□□□□□ -0.48
DDX39B-221ENST00000484566 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
DDX39B-221ENST00000484566 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
DDX39B-221ENST00000484566 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms