RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 MX1P20591 662 aa14.25□□□□□ -0.13
VTI1A-205ENST00000483122 PRKAR2BP31323 418 aa14.25□□□□□ -0.13
VTI1A-205ENST00000483122 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
VTI1A-205ENST00000483122 C14orf93Q9H972 538 aaKnown RBP14.25□□□□□ -0.13
VTI1A-205ENST00000483122 CTNNA3Q9UI47 895 aa14.25□□□□□ -0.13
VTI1A-205ENST00000483122 LRRC7Q96NW7 1537 aa14.25□□□□□ -0.13
VTI1A-205ENST00000483122 A0A1W2PP64 1363 aa14.25□□□□□ -0.13
VTI1A-205ENST00000483122 CEP170BQ9Y4F5 1589 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-205ENST00000483122 IDI1Q13907 227 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 CNPY2Q9Y2B0 182 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 TMEM131LA2VDJ0 1609 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 A2ML1A8K2U0 1454 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 SLFN14P0C7P3 912 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 MCM2P49736 904 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 INTS4Q96HW7 963 aaKnown RBP14.24□□□□□ -0.13
VTI1A-205ENST00000483122 API5Q9BZZ5 524 aaKnown RBP14.24□□□□□ -0.13
VTI1A-205ENST00000483122 MBIPQ9NS73 344 aa14.24□□□□□ -0.13
VTI1A-205ENST00000483122 NAA30Q147X3 362 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-205ENST00000483122 TWISTNBQ3B726 338 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-205ENST00000483122 C8orf58Q8NAV2 365 aa14.23□□□□□ -0.13
VTI1A-205ENST00000483122 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
VTI1A-205ENST00000483122 GABPB1Q06547 395 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-205ENST00000483122 PHACTR3Q96KR7 559 aa14.23□□□□□ -0.13
VTI1A-205ENST00000483122 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
VTI1A-205ENST00000483122 CEP85Q6P2H3 762 aa14.22□□□□□ -0.13
VTI1A-205ENST00000483122 GIMAP6Q6P9H5 292 aa14.22□□□□□ -0.13
VTI1A-205ENST00000483122 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
VTI1A-205ENST00000483122 FYB1O15117 783 aa14.22□□□□□ -0.13
VTI1A-205ENST00000483122 SAFB2Q14151 953 aaKnown RBP eCLIP14.22□□□□□ -0.13
VTI1A-205ENST00000483122 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
VTI1A-205ENST00000483122 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
VTI1A-205ENST00000483122 FCHSD2O94868 740 aa14.21□□□□□ -0.13
VTI1A-205ENST00000483122 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
VTI1A-205ENST00000483122 RPAP1Q9BWH6 1393 aaPredicted RBP14.21□□□□□ -0.13
VTI1A-205ENST00000483122 DDX41Q9UJV9 622 aaKnown RBP14.21□□□□□ -0.13
VTI1A-205ENST00000483122 RTL1A6NKG5 1358 aa14.21□□□□□ -0.14
VTI1A-205ENST00000483122 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.14
VTI1A-205ENST00000483122 GNAI1P63096 354 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 IRX5P78411 483 aaPredicted RBP14.2□□□□□ -0.14
VTI1A-205ENST00000483122 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 TSHZ3Q63HK5 1081 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 KIF24Q5T7B8 1368 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 HMOX1P09601 288 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 PTGS1P23219 599 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 KCNJ4P48050 445 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 ESYT1Q9BSJ8 1104 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 IFT57Q9NWB7 429 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
VTI1A-205ENST00000483122 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
VTI1A-205ENST00000483122 FBLN1P23142 703 aa14.19□□□□□ -0.14
VTI1A-205ENST00000483122 RPAP2Q8IXW5 612 aaPredicted RBP14.19□□□□□ -0.14
VTI1A-205ENST00000483122 IPO4Q8TEX9 1081 aaKnown RBP14.19□□□□□ -0.14
VTI1A-205ENST00000483122 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
VTI1A-205ENST00000483122 PNPLA6Q8IY17 1366 aa14.19□□□□□ -0.14
VTI1A-205ENST00000483122 TPM3P06753 285 aa14.19□□□□□ -0.14
VTI1A-205ENST00000483122 PDE1AP54750 535 aa14.19□□□□□ -0.14
VTI1A-205ENST00000483122 UBE2HP62256 183 aa14.19□□□□□ -0.14
VTI1A-205ENST00000483122 C16orf45Q96MC5 204 aaPredicted RBP14.19□□□□□ -0.14
VTI1A-205ENST00000483122 RGS12O14924 1447 aa14.18□□□□□ -0.14
VTI1A-205ENST00000483122 MORC2Q9Y6X9 1032 aaPredicted RBP14.18□□□□□ -0.14
VTI1A-205ENST00000483122 PPLO60437 1756 aa14.18□□□□□ -0.14
VTI1A-205ENST00000483122 FIBPO43427 364 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 SYCP1Q15431 976 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 ANKRD26Q9UPS8 1709 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 SMTNL1A8MU46 457 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 MCCP23508 829 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 LRMPQ12912 555 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 TERF2Q15554 542 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 ANO2Q9NQ90 1003 aa14.17□□□□□ -0.14
VTI1A-205ENST00000483122 ARHGEF28Q8N1W1 1705 aaKnown RBP14.17□□□□□ -0.14
VTI1A-205ENST00000483122 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
VTI1A-205ENST00000483122 CDK11BP21127 795 aaKnown RBP14.16□□□□□ -0.14
VTI1A-205ENST00000483122 KIF18AQ8NI77 898 aa14.16□□□□□ -0.14
VTI1A-205ENST00000483122 MEIS3Q99687 375 aa14.16□□□□□ -0.14
VTI1A-205ENST00000483122 MSH6P52701 1360 aa14.16□□□□□ -0.14
VTI1A-205ENST00000483122 NUTM2DQ5VT03 806 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-205ENST00000483122 THEMISQ8N1K5 641 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-205ENST00000483122 LMTK3Q96Q04 1460 aa14.16□□□□□ -0.14
VTI1A-205ENST00000483122 SLIT1O75093 1534 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 ZSCAN22P10073 491 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-205ENST00000483122 SRPK2P78362 688 aaKnown RBP14.15□□□□□ -0.14
VTI1A-205ENST00000483122 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-205ENST00000483122 OSBPL3Q9H4L5 887 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 RPGRIP1LQ68CZ1 1315 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 NEXMIFQ5QGS0 1516 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 TNNT1P13805 278 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 ANAPC15P60006 121 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 PLCD3Q8N3E9 789 aa14.15□□□□□ -0.14
VTI1A-205ENST00000483122 ARHGAP23Q9P227 1491 aa14.14□□□□□ -0.15
VTI1A-205ENST00000483122 CCDC186Q7Z3E2 898 aa14.14□□□□□ -0.15
VTI1A-205ENST00000483122 TMEM2Q9UHN6 1383 aa14.14□□□□□ -0.15
VTI1A-205ENST00000483122 FAM83GA6ND36 823 aa14.14□□□□□ -0.15
VTI1A-205ENST00000483122 DTNBO60941 627 aa14.14□□□□□ -0.15
VTI1A-205ENST00000483122 NRBP1Q9UHY1 535 aa14.14□□□□□ -0.15
VTI1A-205ENST00000483122 CHMLP26374 656 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms