RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 HOXC9P31274 260 aa18.71■□□□□ 0.59
DDR1-244ENST00000482873 TTC22Q5TAA0 569 aa18.71■□□□□ 0.59
DDR1-244ENST00000482873 ANP32BQ92688 251 aaKnown RBP18.71■□□□□ 0.59
DDR1-244ENST00000482873 ATP10DQ9P241 1426 aa18.7■□□□□ 0.58
DDR1-244ENST00000482873 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
DDR1-244ENST00000482873 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
DDR1-244ENST00000482873 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
DDR1-244ENST00000482873 OFD1O75665 1012 aa18.7■□□□□ 0.58
DDR1-244ENST00000482873 MCTP1Q6DN14 999 aa18.7■□□□□ 0.58
DDR1-244ENST00000482873 PDCL3Q9H2J4 239 aa18.7■□□□□ 0.58
DDR1-244ENST00000482873 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
DDR1-244ENST00000482873 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
DDR1-244ENST00000482873 LMOD2Q6P5Q4 547 aa18.69■□□□□ 0.58
DDR1-244ENST00000482873 STK31Q9BXU1 1019 aa18.69■□□□□ 0.58
DDR1-244ENST00000482873 SBNO1A3KN83 1393 aa18.69■□□□□ 0.58
DDR1-244ENST00000482873 MSNP26038 577 aaKnown RBP18.69■□□□□ 0.58
DDR1-244ENST00000482873 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
DDR1-244ENST00000482873 TTC21AQ8NDW8 1320 aa18.69■□□□□ 0.58
DDR1-244ENST00000482873 PKP1Q13835 747 aa18.68■□□□□ 0.58
DDR1-244ENST00000482873 CAVIN1Q6NZI2 390 aaKnown RBP18.68■□□□□ 0.58
DDR1-244ENST00000482873 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
DDR1-244ENST00000482873 PTPRCP08575 1304 aa18.68■□□□□ 0.58
DDR1-244ENST00000482873 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
DDR1-244ENST00000482873 ZNF445P59923 1031 aa18.67■□□□□ 0.58
DDR1-244ENST00000482873 FLIIQ13045 1269 aa18.67■□□□□ 0.58
DDR1-244ENST00000482873 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
DDR1-244ENST00000482873 ANXA1P04083 346 aa18.67■□□□□ 0.58
DDR1-244ENST00000482873 NCLP19338 710 aaKnown RBP18.67■□□□□ 0.58
DDR1-244ENST00000482873 PHAXQ9H814 394 aaKnown RBP18.67■□□□□ 0.58
DDR1-244ENST00000482873 KIAA0232Q92628 1395 aa18.67■□□□□ 0.58
DDR1-244ENST00000482873 SETD1BQ9UPS6 1966 aaKnown RBP18.67■□□□□ 0.58
DDR1-244ENST00000482873 ZSCAN23Q3MJ62 389 aa18.67■□□□□ 0.58
DDR1-244ENST00000482873 LMBRD1Q9NUN5 540 aa18.67■□□□□ 0.58
DDR1-244ENST00000482873 HAP1P54257 671 aaPredicted RBP18.66■□□□□ 0.58
DDR1-244ENST00000482873 ARHGEF10O15013 1369 aa18.66■□□□□ 0.58
DDR1-244ENST00000482873 NRKQ7Z2Y5 1582 aa18.66■□□□□ 0.58
DDR1-244ENST00000482873 LRRC59Q96AG4 307 aaKnown RBP18.66■□□□□ 0.58
DDR1-244ENST00000482873 CYP2E1P05181 493 aaPredicted RBP18.65■□□□□ 0.58
DDR1-244ENST00000482873 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
DDR1-244ENST00000482873 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
DDR1-244ENST00000482873 RABEP1Q15276 862 aa18.65■□□□□ 0.58
DDR1-244ENST00000482873 LGR6Q9HBX8 967 aa18.65■□□□□ 0.58
DDR1-244ENST00000482873 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.64■□□□□ 0.57
DDR1-244ENST00000482873 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
DDR1-244ENST00000482873 KCNQ3O43525 872 aa18.63■□□□□ 0.57
DDR1-244ENST00000482873 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
DDR1-244ENST00000482873 NUCB2P80303 420 aa18.63■□□□□ 0.57
DDR1-244ENST00000482873 LRRFIP2Q9Y608 721 aaKnown RBP18.63■□□□□ 0.57
DDR1-244ENST00000482873 USP26Q9BXU7 913 aa18.63■□□□□ 0.57
DDR1-244ENST00000482873 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
DDR1-244ENST00000482873 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.63■□□□□ 0.57
DDR1-244ENST00000482873 GNAI2P04899 355 aa18.62■□□□□ 0.57
DDR1-244ENST00000482873 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
DDR1-244ENST00000482873 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
DDR1-244ENST00000482873 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
DDR1-244ENST00000482873 PDLIM2Q96JY6 352 aa18.62■□□□□ 0.57
DDR1-244ENST00000482873 NOL7Q9UMY1 257 aaKnown RBP18.62■□□□□ 0.57
DDR1-244ENST00000482873 PHF8Q9UPP1 1060 aa18.62■□□□□ 0.57
DDR1-244ENST00000482873 TOPAZ1Q8N9V7 1692 aa18.62■□□□□ 0.57
DDR1-244ENST00000482873 CCT4P50991 539 aaKnown RBP18.61■□□□□ 0.57
DDR1-244ENST00000482873 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
DDR1-244ENST00000482873 RILPL2Q969X0 211 aa18.61■□□□□ 0.57
DDR1-244ENST00000482873 R3HCC1Q9Y3T6 440 aaKnown RBP18.61■□□□□ 0.57
DDR1-244ENST00000482873 KDRP35968 1356 aa18.61■□□□□ 0.57
DDR1-244ENST00000482873 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
DDR1-244ENST00000482873 PSME1Q06323 249 aa18.61■□□□□ 0.57
DDR1-244ENST00000482873 HDGFL1Q5TGJ6 251 aa18.61■□□□□ 0.57
DDR1-244ENST00000482873 ZGPATQ8N5A5 531 aaKnown RBP18.61■□□□□ 0.57
DDR1-244ENST00000482873 CHAMP1Q96JM3 812 aa18.61■□□□□ 0.57
DDR1-244ENST00000482873 HMMRO75330 724 aa18.6■□□□□ 0.57
DDR1-244ENST00000482873 PDE1AP54750 535 aa18.6■□□□□ 0.57
DDR1-244ENST00000482873 HS1BP3Q53T59 392 aa18.6■□□□□ 0.57
DDR1-244ENST00000482873 FOXD4L5Q5VV16 416 aaPredicted RBP18.6■□□□□ 0.57
DDR1-244ENST00000482873 FOXD4L4Q8WXT5 416 aaPredicted RBP18.6■□□□□ 0.57
DDR1-244ENST00000482873 RBM27Q9P2N5 1060 aaKnown RBP18.6■□□□□ 0.57
DDR1-244ENST00000482873 TRIM6-TRIM34B2RNG4 842 aa18.6■□□□□ 0.57
DDR1-244ENST00000482873 PRPF40AO75400 957 aaKnown RBP18.6■□□□□ 0.57
DDR1-244ENST00000482873 TAF7Q15545 349 aaPredicted RBP18.6■□□□□ 0.57
DDR1-244ENST00000482873 MPRIPQ6WCQ1 1025 aa18.6■□□□□ 0.57
DDR1-244ENST00000482873 GPT2Q8TD30 523 aa18.6■□□□□ 0.57
DDR1-244ENST00000482873 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
DDR1-244ENST00000482873 TERF1P54274 439 aa18.59■□□□□ 0.57
DDR1-244ENST00000482873 ZDHHC9Q9Y397 364 aa18.58■□□□□ 0.57
DDR1-244ENST00000482873 PIK3C2AO00443 1686 aa18.58■□□□□ 0.56
DDR1-244ENST00000482873 ZNF500O60304 480 aaPredicted RBP18.58■□□□□ 0.56
DDR1-244ENST00000482873 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
DDR1-244ENST00000482873 RGPD1P0DJD0 1748 aa18.58■□□□□ 0.56
DDR1-244ENST00000482873 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
DDR1-244ENST00000482873 FAM13BQ9NYF5 915 aa18.57■□□□□ 0.56
DDR1-244ENST00000482873 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
DDR1-244ENST00000482873 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
DDR1-244ENST00000482873 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
DDR1-244ENST00000482873 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
DDR1-244ENST00000482873 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
DDR1-244ENST00000482873 NALCNQ8IZF0 1738 aa18.56■□□□□ 0.56
DDR1-244ENST00000482873 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
DDR1-244ENST00000482873 TMEM63CQ9P1W3 806 aa18.56■□□□□ 0.56
DDR1-244ENST00000482873 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
DDR1-244ENST00000482873 NSFL1CQ9UNZ2 370 aaKnown RBP18.56■□□□□ 0.56
DDR1-244ENST00000482873 ARHGAP23Q9P227 1491 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms