RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 IL17REQ8NFR9 667 aa14.78□□□□□ -0.04
RAPGEF3-210ENST00000482843 SBNO1A3KN83 1393 aa14.78□□□□□ -0.04
RAPGEF3-210ENST00000482843 INTS3Q68E01 1043 aaKnown RBP14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 DCTPP1Q9H773 170 aa14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 LGR6Q9HBX8 967 aa14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 PIK3R4Q99570 1358 aa14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 AIMP1Q12904 312 aaKnown RBP14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 C1orf141Q5JVX7 400 aa14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 FAM43BQ6ZT52 329 aaPredicted RBP14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 PHAXQ9H814 394 aaKnown RBP14.77□□□□□ -0.04
RAPGEF3-210ENST00000482843 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.05
RAPGEF3-210ENST00000482843 MAP4K4O95819 1239 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 CCT4P50991 539 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 LRRFIP2Q9Y608 721 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 GSPT1P15170 499 aaKnown RBP14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 BRPF1P55201 1214 aaPredicted RBP14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 PTPRCP08575 1304 aa14.76□□□□□ -0.05
RAPGEF3-210ENST00000482843 NLRP2Q9NX02 1062 aa14.75□□□□□ -0.05
RAPGEF3-210ENST00000482843 SDSP20132 328 aa14.75□□□□□ -0.05
RAPGEF3-210ENST00000482843 DDX17Q92841 729 aaKnown RBP14.75□□□□□ -0.05
RAPGEF3-210ENST00000482843 SETD1BQ9UPS6 1966 aaKnown RBP14.75□□□□□ -0.05
RAPGEF3-210ENST00000482843 KIF20BQ96Q89 1820 aa14.75□□□□□ -0.05
RAPGEF3-210ENST00000482843 SURF6O75683 361 aaKnown RBP14.74□□□□□ -0.05
RAPGEF3-210ENST00000482843 TECPR2O15040 1411 aa14.74□□□□□ -0.05
RAPGEF3-210ENST00000482843 KCNQ3O43525 872 aa14.74□□□□□ -0.05
RAPGEF3-210ENST00000482843 TTC22Q5TAA0 569 aa14.74□□□□□ -0.05
RAPGEF3-210ENST00000482843 BTBD11A6QL63 1104 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 CD2BP2O95400 341 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 GNAI3P08754 354 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 MCM4P33991 863 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 ANO2Q9NQ90 1003 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 OVOS2A0A0J9YW53 1432 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 OVOS2Q6IE36 1432 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 TICAM2Q86XR7 235 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 NUTM1Q86Y26 1132 aa14.73□□□□□ -0.05
RAPGEF3-210ENST00000482843 IGSF1Q8N6C5 1336 aa14.72□□□□□ -0.05
RAPGEF3-210ENST00000482843 PNMA6EA0A0J9YXQ4 647 aa14.72□□□□□ -0.05
RAPGEF3-210ENST00000482843 PTCH1Q13635 1447 aa14.72□□□□□ -0.05
RAPGEF3-210ENST00000482843 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF3-210ENST00000482843 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF3-210ENST00000482843 LRRCC1Q9C099 1032 aa14.72□□□□□ -0.05
RAPGEF3-210ENST00000482843 CHPF2Q9P2E5 772 aa14.72□□□□□ -0.05
RAPGEF3-210ENST00000482843 RTL1A6NKG5 1358 aa14.71□□□□□ -0.05
RAPGEF3-210ENST00000482843 PI4KAP2A4QPH2 592 aa14.71□□□□□ -0.05
RAPGEF3-210ENST00000482843 PI4KAP1Q8N8J0 262 aa14.71□□□□□ -0.05
RAPGEF3-210ENST00000482843 C9orf78Q9NZ63 289 aaPredicted RBP14.71□□□□□ -0.05
RAPGEF3-210ENST00000482843 NRXN3Q9Y4C0 1643 aa14.71□□□□□ -0.05
RAPGEF3-210ENST00000482843 TRAK2O60296 914 aa14.71□□□□□ -0.06
RAPGEF3-210ENST00000482843 GCP02774 474 aa14.71□□□□□ -0.06
RAPGEF3-210ENST00000482843 CABLES1Q8TDN4 633 aa14.71□□□□□ -0.06
RAPGEF3-210ENST00000482843 ARID3AQ99856 593 aa14.71□□□□□ -0.06
RAPGEF3-210ENST00000482843 ANTXR1Q9H6X2 564 aa14.71□□□□□ -0.06
RAPGEF3-210ENST00000482843 SRGAP3O43295 1099 aa14.7□□□□□ -0.06
RAPGEF3-210ENST00000482843 PLEKHO1Q53GL0 409 aaPredicted RBP14.7□□□□□ -0.06
RAPGEF3-210ENST00000482843 SRCIN1Q9C0H9 1055 aa14.7□□□□□ -0.06
RAPGEF3-210ENST00000482843 ARHGEF10O15013 1369 aa14.7□□□□□ -0.06
RAPGEF3-210ENST00000482843 REREQ9P2R6 1566 aa14.7□□□□□ -0.06
RAPGEF3-210ENST00000482843 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
RAPGEF3-210ENST00000482843 IP6K1Q92551 441 aa14.69□□□□□ -0.06
RAPGEF3-210ENST00000482843 MAP3K5Q99683 1374 aa14.69□□□□□ -0.06
RAPGEF3-210ENST00000482843 ANKRD24Q8TF21 1146 aa14.69□□□□□ -0.06
RAPGEF3-210ENST00000482843 KIAA0232Q92628 1395 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 REC8O95072 547 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 MYL6BP14649 208 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 RBM25P49756 843 aaKnown RBP14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 FAM193AP78312 1265 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 KRT28Q7Z3Y7 464 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 GBP4Q96PP9 640 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 PDE1AP54750 535 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 CHRNA2Q15822 529 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 USP31Q70CQ4 1352 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 ATF3P18847 181 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 PIP4K2AP48426 406 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 SLC39A6Q13433 755 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 RAPGEF4Q8WZA2 1011 aa14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 RNF216Q9NWF9 866 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF3-210ENST00000482843 GOLGA6L3A6NEY3 463 aa14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 GOLGA6L22H0YM25 854 aa14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 NEK4P51957 841 aa14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 MX1P20591 662 aa14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 PPP1R42Q7Z4L9 355 aa14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 TNPO1Q92973 898 aaKnown RBP14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 ST18O60284 1047 aa14.67□□□□□ -0.06
RAPGEF3-210ENST00000482843 CRB1P82279 1406 aa14.66□□□□□ -0.06
RAPGEF3-210ENST00000482843 RRP9O43818 475 aaKnown RBP14.66□□□□□ -0.06
RAPGEF3-210ENST00000482843 ZNF830Q96NB3 372 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF3-210ENST00000482843 ZNF330Q9Y3S2 320 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF3-210ENST00000482843 ANKRD26Q9UPS8 1709 aa14.66□□□□□ -0.06
RAPGEF3-210ENST00000482843 ERC2O15083 957 aa14.66□□□□□ -0.06
RAPGEF3-210ENST00000482843 SSFA2P28290 1259 aa14.66□□□□□ -0.06
RAPGEF3-210ENST00000482843 NBPF7P0C2Y1 421 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF3-210ENST00000482843 PRAMEF22A3QJZ6 481 aa14.65□□□□□ -0.06
RAPGEF3-210ENST00000482843 JARID2Q92833 1246 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF3-210ENST00000482843 A0A0G2JS52 829 aa14.65□□□□□ -0.06
RAPGEF3-210ENST00000482843 UPF3BQ9BZI7 483 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms