RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 CDC42BPGQ6DT37 1551 aa17.47■□□□□ 0.39
COL9A2-207ENST00000482722 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
COL9A2-207ENST00000482722 ABCC4O15439 1325 aa17.47■□□□□ 0.39
COL9A2-207ENST00000482722 LRSAM1Q6UWE0 723 aa17.46■□□□□ 0.39
COL9A2-207ENST00000482722 API5Q9BZZ5 524 aaKnown RBP17.46■□□□□ 0.39
COL9A2-207ENST00000482722 ZHX1Q9UKY1 873 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-207ENST00000482722 NSFL1CQ9UNZ2 370 aaKnown RBP17.46■□□□□ 0.39
COL9A2-207ENST00000482722 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
COL9A2-207ENST00000482722 MAP3K19Q56UN5 1328 aa17.46■□□□□ 0.39
COL9A2-207ENST00000482722 BRPF1P55201 1214 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-207ENST00000482722 ABTB2Q8N961 1025 aa17.46■□□□□ 0.38
COL9A2-207ENST00000482722 ZDHHC9Q9Y397 364 aa17.46■□□□□ 0.38
COL9A2-207ENST00000482722 USP6P35125 1406 aa17.45■□□□□ 0.38
COL9A2-207ENST00000482722 PTCH1Q13635 1447 aa17.45■□□□□ 0.38
COL9A2-207ENST00000482722 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
COL9A2-207ENST00000482722 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
COL9A2-207ENST00000482722 RNF214Q8ND24 703 aa17.45■□□□□ 0.38
COL9A2-207ENST00000482722 AMPHP49418 695 aa17.44■□□□□ 0.38
COL9A2-207ENST00000482722 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
COL9A2-207ENST00000482722 JARID2Q92833 1246 aaPredicted RBP17.44■□□□□ 0.38
COL9A2-207ENST00000482722 USP26Q9BXU7 913 aa17.44■□□□□ 0.38
COL9A2-207ENST00000482722 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
COL9A2-207ENST00000482722 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
COL9A2-207ENST00000482722 CCDC94Q9BW85 323 aaPredicted RBP17.43■□□□□ 0.38
COL9A2-207ENST00000482722 A0A0U1RQG5 324 aaPredicted RBP17.42■□□□□ 0.38
COL9A2-207ENST00000482722 TTC22Q5TAA0 569 aa17.42■□□□□ 0.38
COL9A2-207ENST00000482722 CWC22Q9HCG8 908 aaKnown RBP17.42■□□□□ 0.38
COL9A2-207ENST00000482722 CDK12Q9NYV4 1490 aaPredicted RBP17.42■□□□□ 0.38
COL9A2-207ENST00000482722 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
COL9A2-207ENST00000482722 KNDC1Q76NI1 1749 aa17.42■□□□□ 0.38
COL9A2-207ENST00000482722 SLIT1O75093 1534 aa17.42■□□□□ 0.38
COL9A2-207ENST00000482722 ORAI2Q96SN7 254 aa17.42■□□□□ 0.38
COL9A2-207ENST00000482722 PIK3R4Q99570 1358 aa17.41■□□□□ 0.38
COL9A2-207ENST00000482722 PTMAP06454 111 aaKnown RBP17.41■□□□□ 0.38
COL9A2-207ENST00000482722 MON2Q7Z3U7 1717 aa17.41■□□□□ 0.38
COL9A2-207ENST00000482722 SDSP20132 328 aa17.4■□□□□ 0.38
COL9A2-207ENST00000482722 TSC1Q92574 1164 aa17.4■□□□□ 0.38
COL9A2-207ENST00000482722 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
COL9A2-207ENST00000482722 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
COL9A2-207ENST00000482722 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
COL9A2-207ENST00000482722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.4■□□□□ 0.38
COL9A2-207ENST00000482722 DMTNQ08495 405 aa17.39■□□□□ 0.37
COL9A2-207ENST00000482722 KIAA2012Q0VF49 1180 aa17.39■□□□□ 0.37
COL9A2-207ENST00000482722 AKAP12Q02952 1782 aa17.39■□□□□ 0.37
COL9A2-207ENST00000482722 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
COL9A2-207ENST00000482722 MYRIPQ8NFW9 859 aa17.39■□□□□ 0.37
COL9A2-207ENST00000482722 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
COL9A2-207ENST00000482722 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
COL9A2-207ENST00000482722 ZSCAN20P17040 1043 aaPredicted RBP17.38■□□□□ 0.37
COL9A2-207ENST00000482722 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
COL9A2-207ENST00000482722 NOL8Q76FK4 1167 aaKnown RBP17.38■□□□□ 0.37
COL9A2-207ENST00000482722 MPNDQ8N594 471 aa17.38■□□□□ 0.37
COL9A2-207ENST00000482722 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
COL9A2-207ENST00000482722 EYA1Q99502 592 aa17.38■□□□□ 0.37
COL9A2-207ENST00000482722 CEP170BQ9Y4F5 1589 aaPredicted RBP17.38■□□□□ 0.37
COL9A2-207ENST00000482722 ST18O60284 1047 aa17.38■□□□□ 0.37
COL9A2-207ENST00000482722 DNTTIP2Q5QJE6 756 aaKnown RBP17.38■□□□□ 0.37
COL9A2-207ENST00000482722 MEIS3Q99687 375 aa17.38■□□□□ 0.37
COL9A2-207ENST00000482722 DIP2AQ14689 1571 aa17.37■□□□□ 0.37
COL9A2-207ENST00000482722 UTP14CQ5TAP6 766 aaKnown RBP17.37■□□□□ 0.37
COL9A2-207ENST00000482722 OVOS2A0A0J9YW53 1432 aa17.37■□□□□ 0.37
COL9A2-207ENST00000482722 OVOS2Q6IE36 1432 aa17.37■□□□□ 0.37
COL9A2-207ENST00000482722 SLC4A2P04920 1241 aa17.37■□□□□ 0.37
COL9A2-207ENST00000482722 HSPA2P54652 639 aa17.37■□□□□ 0.37
COL9A2-207ENST00000482722 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
COL9A2-207ENST00000482722 PHF8Q9UPP1 1060 aa17.37■□□□□ 0.37
COL9A2-207ENST00000482722 PSME1Q06323 249 aa17.36■□□□□ 0.37
COL9A2-207ENST00000482722 TPRNQ4KMQ1 711 aa17.36■□□□□ 0.37
COL9A2-207ENST00000482722 ZNF710Q8N1W2 664 aa17.36■□□□□ 0.37
COL9A2-207ENST00000482722 MSH6P52701 1360 aa17.36■□□□□ 0.37
COL9A2-207ENST00000482722 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
COL9A2-207ENST00000482722 F6X3S4 739 aa17.35■□□□□ 0.37
COL9A2-207ENST00000482722 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
COL9A2-207ENST00000482722 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
COL9A2-207ENST00000482722 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
COL9A2-207ENST00000482722 MBD3O95983 291 aa17.34■□□□□ 0.37
COL9A2-207ENST00000482722 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
COL9A2-207ENST00000482722 ZNF830Q96NB3 372 aaPredicted RBP17.34■□□□□ 0.37
COL9A2-207ENST00000482722 ANKRD44Q8N8A2 993 aa17.34■□□□□ 0.37
COL9A2-207ENST00000482722 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
COL9A2-207ENST00000482722 NEK4P51957 841 aa17.34■□□□□ 0.37
COL9A2-207ENST00000482722 CHL1O00533 1208 aa17.33■□□□□ 0.36
COL9A2-207ENST00000482722 CBX1P83916 185 aa17.33■□□□□ 0.36
COL9A2-207ENST00000482722 CASC1Q6TDU7 716 aa17.33■□□□□ 0.36
COL9A2-207ENST00000482722 FAM177BA6PVY3 158 aa17.33■□□□□ 0.36
COL9A2-207ENST00000482722 G2E3Q7L622 706 aa17.32■□□□□ 0.36
COL9A2-207ENST00000482722 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
COL9A2-207ENST00000482722 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
COL9A2-207ENST00000482722 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
COL9A2-207ENST00000482722 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
COL9A2-207ENST00000482722 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
COL9A2-207ENST00000482722 PRIMPOLQ96LW4 560 aa17.31■□□□□ 0.36
COL9A2-207ENST00000482722 GDPD2Q9HCC8 539 aa17.31■□□□□ 0.36
COL9A2-207ENST00000482722 HOXC9P31274 260 aa17.3■□□□□ 0.36
COL9A2-207ENST00000482722 RPAP2Q8IXW5 612 aaPredicted RBP17.3■□□□□ 0.36
COL9A2-207ENST00000482722 LRRC59Q96AG4 307 aaKnown RBP17.3■□□□□ 0.36
COL9A2-207ENST00000482722 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
COL9A2-207ENST00000482722 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
COL9A2-207ENST00000482722 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
COL9A2-207ENST00000482722 REC8O95072 547 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms