RNA–Protein interactions for RNA: ENST00000481706.1

PHACTR1-208, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 5

Gene PHACTR1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-208ENST00000481706 MCM10Q7L590 875 aa13.56□□□□□ -0.24
PHACTR1-208ENST00000481706 FAM9BQ8IZU0 186 aa13.56□□□□□ -0.24
PHACTR1-208ENST00000481706 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
PHACTR1-208ENST00000481706 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
PHACTR1-208ENST00000481706 PALLDQ8WX93 1383 aa13.56□□□□□ -0.24
PHACTR1-208ENST00000481706 PAPPAQ13219 1627 aa13.55□□□□□ -0.24
PHACTR1-208ENST00000481706 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
PHACTR1-208ENST00000481706 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
PHACTR1-208ENST00000481706 LY75O60449 1722 aa13.55□□□□□ -0.24
PHACTR1-208ENST00000481706 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
PHACTR1-208ENST00000481706 APAF1O14727 1248 aa13.54□□□□□ -0.24
PHACTR1-208ENST00000481706 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
PHACTR1-208ENST00000481706 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
PHACTR1-208ENST00000481706 ASAP1Q9ULH1 1129 aa13.54□□□□□ -0.24
PHACTR1-208ENST00000481706 NUP188Q5SRE5 1749 aa13.53□□□□□ -0.24
PHACTR1-208ENST00000481706 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
PHACTR1-208ENST00000481706 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
PHACTR1-208ENST00000481706 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
PHACTR1-208ENST00000481706 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
PHACTR1-208ENST00000481706 PROM2Q8N271 834 aa13.52□□□□□ -0.25
PHACTR1-208ENST00000481706 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
PHACTR1-208ENST00000481706 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
PHACTR1-208ENST00000481706 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
PHACTR1-208ENST00000481706 CCNL1Q9UK58 526 aaPredicted RBP13.51□□□□□ -0.25
PHACTR1-208ENST00000481706 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
PHACTR1-208ENST00000481706 KCPQ6ZWJ8 1503 aa13.5□□□□□ -0.25
PHACTR1-208ENST00000481706 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
PHACTR1-208ENST00000481706 SIK1P57059 783 aa13.5□□□□□ -0.25
PHACTR1-208ENST00000481706 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
PHACTR1-208ENST00000481706 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
PHACTR1-208ENST00000481706 CICQ96RK0 1608 aaPredicted RBP13.5□□□□□ -0.25
PHACTR1-208ENST00000481706 BTBD11A6QL63 1104 aa13.49□□□□□ -0.25
PHACTR1-208ENST00000481706 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
PHACTR1-208ENST00000481706 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
PHACTR1-208ENST00000481706 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
PHACTR1-208ENST00000481706 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
PHACTR1-208ENST00000481706 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
PHACTR1-208ENST00000481706 LRRC4BQ9NT99 713 aa13.49□□□□□ -0.25
PHACTR1-208ENST00000481706 C5P01031 1676 aa13.48□□□□□ -0.25
PHACTR1-208ENST00000481706 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
PHACTR1-208ENST00000481706 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
PHACTR1-208ENST00000481706 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
PHACTR1-208ENST00000481706 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
PHACTR1-208ENST00000481706 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
PHACTR1-208ENST00000481706 KCNQ4P56696 695 aa13.47□□□□□ -0.25
PHACTR1-208ENST00000481706 NBPF14Q5TI25 921 aa13.47□□□□□ -0.25
PHACTR1-208ENST00000481706 BABAM1Q9NWV8 329 aa13.47□□□□□ -0.25
PHACTR1-208ENST00000481706 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
PHACTR1-208ENST00000481706 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
PHACTR1-208ENST00000481706 TJP1Q07157 1748 aa13.46□□□□□ -0.25
PHACTR1-208ENST00000481706 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 ITPK1Q13572 414 aa13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 WWC1Q8IX03 1113 aa13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 FMNL2Q96PY5 1086 aa13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 TAF1LQ8IZX4 1826 aa13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
PHACTR1-208ENST00000481706 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 KCNQ3O43525 872 aa13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 TSPYL4Q9UJ04 414 aa13.44□□□□□ -0.26
PHACTR1-208ENST00000481706 CHL1O00533 1208 aa13.43□□□□□ -0.26
PHACTR1-208ENST00000481706 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
PHACTR1-208ENST00000481706 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
PHACTR1-208ENST00000481706 IL16Q14005 1332 aa13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 ZNF853P0CG23 659 aa13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 GNAI1P63096 354 aa13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 SLC15A2Q16348 729 aa13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 DNAJC10Q8IXB1 793 aa13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
PHACTR1-208ENST00000481706 SNRPA1P09661 255 aaKnown RBP13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 EIF4A1P60842 406 aaKnown RBP13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 WDR63Q8IWG1 891 aa13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 AK7Q96M32 723 aa13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 QSER1Q2KHR3 1735 aa13.41□□□□□ -0.26
PHACTR1-208ENST00000481706 ZNF521Q96K83 1311 aa13.4□□□□□ -0.26
PHACTR1-208ENST00000481706 CYP19A1P11511 503 aaPredicted RBP13.4□□□□□ -0.26
PHACTR1-208ENST00000481706 MBIPQ9NS73 344 aa13.4□□□□□ -0.26
PHACTR1-208ENST00000481706 LAMB4A4D0S4 1761 aa13.4□□□□□ -0.26
PHACTR1-208ENST00000481706 STARD3NLO95772 234 aa13.39□□□□□ -0.27
PHACTR1-208ENST00000481706 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
PHACTR1-208ENST00000481706 TFCP2L1Q9NZI6 479 aa13.39□□□□□ -0.27
PHACTR1-208ENST00000481706 TUBGCP6Q96RT7 1819 aa13.39□□□□□ -0.27
PHACTR1-208ENST00000481706 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
PHACTR1-208ENST00000481706 GNPATO15228 680 aa13.38□□□□□ -0.27
PHACTR1-208ENST00000481706 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
PHACTR1-208ENST00000481706 CCDC87Q9NVE4 849 aa13.38□□□□□ -0.27
PHACTR1-208ENST00000481706 SSFA2P28290 1259 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms