RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 KDM5DQ9BY66 1539 aa10.15□□□□□ -0.78
LRCH3-216ENST00000481048 PZPP20742 1482 aa10.15□□□□□ -0.78
LRCH3-216ENST00000481048 MIA2Q96PC5 1412 aa10.15□□□□□ -0.79
LRCH3-216ENST00000481048 CFAP65Q6ZU64 1925 aaKnown RBP10.14□□□□□ -0.79
LRCH3-216ENST00000481048 LOC105371045A0A1W2PR82 267 aa10.14□□□□□ -0.79
LRCH3-216ENST00000481048 ADH1CP00326 375 aa10.14□□□□□ -0.79
LRCH3-216ENST00000481048 F12P00748 615 aaPredicted RBP10.14□□□□□ -0.79
LRCH3-216ENST00000481048 VEGFBP49765 207 aa10.14□□□□□ -0.79
LRCH3-216ENST00000481048 WDR4P57081 412 aaKnown RBP10.14□□□□□ -0.79
LRCH3-216ENST00000481048 ARID5BQ14865 1188 aa10.14□□□□□ -0.79
LRCH3-216ENST00000481048 THEMISQ8N1K5 641 aaPredicted RBP10.14□□□□□ -0.79
LRCH3-216ENST00000481048 TSC1Q92574 1164 aa10.14□□□□□ -0.79
LRCH3-216ENST00000481048 MAST1Q9Y2H9 1570 aa10.14□□□□□ -0.79
LRCH3-216ENST00000481048 TNRQ92752 1358 aa10.14□□□□□ -0.79
LRCH3-216ENST00000481048 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
LRCH3-216ENST00000481048 TIMP2P16035 220 aa10.13□□□□□ -0.79
LRCH3-216ENST00000481048 MRPL14Q6P1L8 145 aaKnown RBP10.13□□□□□ -0.79
LRCH3-216ENST00000481048 POLR1AO95602 1720 aaPredicted RBP10.13□□□□□ -0.79
LRCH3-216ENST00000481048 NLRP1Q9C000 1473 aa10.12□□□□□ -0.79
LRCH3-216ENST00000481048 NUTM2BA6NNL0 878 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-216ENST00000481048 NUTM2EB1AL46 878 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-216ENST00000481048 SCARF1Q14162 830 aa10.12□□□□□ -0.79
LRCH3-216ENST00000481048 AGERQ15109 404 aa10.12□□□□□ -0.79
LRCH3-216ENST00000481048 NUTM2DQ5VT03 806 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-216ENST00000481048 FBXO31Q5XUX0 539 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-216ENST00000481048 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
LRCH3-216ENST00000481048 NUTM2AQ8IVF1 878 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-216ENST00000481048 NPAS3Q8IXF0 933 aa10.12□□□□□ -0.79
LRCH3-216ENST00000481048 CDK15Q96Q40 435 aa10.12□□□□□ -0.79
LRCH3-216ENST00000481048 EIF2AK4Q9P2K8 1649 aaKnown RBP10.11□□□□□ -0.79
LRCH3-216ENST00000481048 ZNF335Q9H4Z2 1342 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-216ENST00000481048 MYOM3Q5VTT5 1437 aa10.11□□□□□ -0.79
LRCH3-216ENST00000481048 GMPRP36959 345 aa10.11□□□□□ -0.79
LRCH3-216ENST00000481048 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
LRCH3-216ENST00000481048 IRF7Q92985 503 aa10.11□□□□□ -0.79
LRCH3-216ENST00000481048 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
LRCH3-216ENST00000481048 LIMD1Q9UGP4 676 aa10.11□□□□□ -0.79
LRCH3-216ENST00000481048 ZC3H13Q5T200 1668 aaKnown RBP10.11□□□□□ -0.79
LRCH3-216ENST00000481048 RNF17Q9BXT8 1623 aaKnown RBP10.11□□□□□ -0.79
LRCH3-216ENST00000481048 PDE4DQ08499 809 aa10.1□□□□□ -0.79
LRCH3-216ENST00000481048 QPCTQ16769 361 aa10.1□□□□□ -0.79
LRCH3-216ENST00000481048 KANK4Q5T7N3 995 aaPredicted RBP10.1□□□□□ -0.79
LRCH3-216ENST00000481048 KLF16Q9BXK1 252 aaPredicted RBP10.1□□□□□ -0.79
LRCH3-216ENST00000481048 H3BM21 787 aa10.09□□□□□ -0.79
LRCH3-216ENST00000481048 UGGT1Q9NYU2 1555 aa10.09□□□□□ -0.79
LRCH3-216ENST00000481048 DEPDC5O75140 1603 aa10.08□□□□□ -0.8
LRCH3-216ENST00000481048 UBAP1LF5GYI3 381 aa10.08□□□□□ -0.8
LRCH3-216ENST00000481048 ZIC2O95409 532 aaPredicted RBP10.08□□□□□ -0.8
LRCH3-216ENST00000481048 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
LRCH3-216ENST00000481048 BPHLQ86WA6 291 aaPredicted RBP10.08□□□□□ -0.8
LRCH3-216ENST00000481048 MED14O60244 1454 aa10.08□□□□□ -0.8
LRCH3-216ENST00000481048 CPS1P31327 1500 aa10.07□□□□□ -0.8
LRCH3-216ENST00000481048 DUOX2Q9NRD8 1548 aa10.07□□□□□ -0.8
LRCH3-216ENST00000481048 SPATA31D1Q6ZQQ2 1576 aa10.07□□□□□ -0.8
LRCH3-216ENST00000481048 DISP3Q9P2K9 1392 aa10.07□□□□□ -0.8
LRCH3-216ENST00000481048 NR5A1Q13285 461 aa10.07□□□□□ -0.8
LRCH3-216ENST00000481048 ZFAND3Q9H8U3 227 aa10.07□□□□□ -0.8
LRCH3-216ENST00000481048 ABCC3O15438 1527 aa10.07□□□□□ -0.8
LRCH3-216ENST00000481048 NEURL4Q96JN8 1562 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.06□□□□□ -0.8
LRCH3-216ENST00000481048 SOBPA7XYQ1 873 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 TOM1O60784 492 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 LILRB3O75022 631 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 NR3C2P08235 984 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 GRM5P41594 1212 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 ITPKCQ96DU7 683 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 ERBB4Q15303 1308 aa10.06□□□□□ -0.8
LRCH3-216ENST00000481048 SHANK2Q9UPX8 1470 aa10.05□□□□□ -0.8
LRCH3-216ENST00000481048 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
LRCH3-216ENST00000481048 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
LRCH3-216ENST00000481048 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
LRCH3-216ENST00000481048 ARHGAP31Q2M1Z3 1444 aa10.05□□□□□ -0.8
LRCH3-216ENST00000481048 ERBINQ96RT1 1412 aa10.05□□□□□ -0.8
LRCH3-216ENST00000481048 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
LRCH3-216ENST00000481048 CEP152O94986 1710 aa10.04□□□□□ -0.8
LRCH3-216ENST00000481048 ERVK-7P63135 1459 aa10.04□□□□□ -0.8
LRCH3-216ENST00000481048 MROH1Q8NDA8 1641 aa10.04□□□□□ -0.8
LRCH3-216ENST00000481048 PTPN23Q9H3S7 1636 aa10.04□□□□□ -0.8
LRCH3-216ENST00000481048 KIF15Q9NS87 1388 aa10.03□□□□□ -0.8
LRCH3-216ENST00000481048 CROCC2H7BZ55 1655 aa10.03□□□□□ -0.8
LRCH3-216ENST00000481048 FAM181BA6NEQ2 426 aa10.03□□□□□ -0.8
LRCH3-216ENST00000481048 ABCC5O15440 1437 aa10.03□□□□□ -0.8
LRCH3-216ENST00000481048 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
LRCH3-216ENST00000481048 C6orf118Q5T5N4 469 aa10.03□□□□□ -0.8
LRCH3-216ENST00000481048 ZSCAN1Q8NBB4 408 aa10.03□□□□□ -0.8
LRCH3-216ENST00000481048 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
LRCH3-216ENST00000481048 IQGAP1P46940 1657 aa10.02□□□□□ -0.8
LRCH3-216ENST00000481048 PRDM15P57071 1507 aaPredicted RBP10.02□□□□□ -0.81
LRCH3-216ENST00000481048 UBR1Q8IWV7 1749 aa10.02□□□□□ -0.81
LRCH3-216ENST00000481048 KANK1Q14678 1352 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 VWDEQ8N2E2 1590 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 DAPK1P53355 1430 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 SOCS7O14512 581 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 MAN1A2O60476 641 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 CLK2P49760 499 aaKnown RBP10.01□□□□□ -0.81
LRCH3-216ENST00000481048 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 ILDR2Q71H61 639 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 RRP7BPQ9NSQ0 103 aa10.01□□□□□ -0.81
LRCH3-216ENST00000481048 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms