RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 BAG6P46379 1132 aa17.72■□□□□ 0.43
SNRNP200-204ENST00000480615 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
SNRNP200-204ENST00000480615 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
SNRNP200-204ENST00000480615 CEMIPQ8WUJ3 1361 aa17.7■□□□□ 0.42
SNRNP200-204ENST00000480615 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
SNRNP200-204ENST00000480615 MRC1P22897 1456 aa17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 HTATSF1O43719 755 aaKnown RBP17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 KCNQ4P56696 695 aa17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 SLC39A6Q13433 755 aa17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 SIPA1L3O60292 1781 aaPredicted RBP17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 LMOD3Q0VAK6 560 aa17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 MIS18AQ9NYP9 233 aa17.69■□□□□ 0.42
SNRNP200-204ENST00000480615 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
SNRNP200-204ENST00000480615 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
SNRNP200-204ENST00000480615 PTCD1O75127 700 aaKnown RBP17.67■□□□□ 0.42
SNRNP200-204ENST00000480615 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
SNRNP200-204ENST00000480615 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
SNRNP200-204ENST00000480615 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
SNRNP200-204ENST00000480615 PLSCR1O15162 318 aa17.66■□□□□ 0.42
SNRNP200-204ENST00000480615 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
SNRNP200-204ENST00000480615 LY75O60449 1722 aa17.65■□□□□ 0.42
SNRNP200-204ENST00000480615 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
SNRNP200-204ENST00000480615 PROM2Q8N271 834 aa17.65■□□□□ 0.42
SNRNP200-204ENST00000480615 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
SNRNP200-204ENST00000480615 PAPPAQ13219 1627 aa17.64■□□□□ 0.42
SNRNP200-204ENST00000480615 RGPD3A6NKT7 1758 aaPredicted RBP17.64■□□□□ 0.41
SNRNP200-204ENST00000480615 RGPD4Q7Z3J3 1758 aa17.64■□□□□ 0.41
SNRNP200-204ENST00000480615 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
SNRNP200-204ENST00000480615 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
SNRNP200-204ENST00000480615 CCNL1Q9UK58 526 aaPredicted RBP17.64■□□□□ 0.41
SNRNP200-204ENST00000480615 KCNQ3O43525 872 aa17.63■□□□□ 0.41
SNRNP200-204ENST00000480615 RREB1Q92766 1687 aa17.62■□□□□ 0.41
SNRNP200-204ENST00000480615 LRRC4BQ9NT99 713 aa17.62■□□□□ 0.41
SNRNP200-204ENST00000480615 NUP188Q5SRE5 1749 aa17.62■□□□□ 0.41
SNRNP200-204ENST00000480615 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
SNRNP200-204ENST00000480615 SIK1P57059 783 aa17.61■□□□□ 0.41
SNRNP200-204ENST00000480615 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
SNRNP200-204ENST00000480615 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
SNRNP200-204ENST00000480615 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
SNRNP200-204ENST00000480615 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
SNRNP200-204ENST00000480615 UBR2Q8IWV8 1755 aa17.6■□□□□ 0.41
SNRNP200-204ENST00000480615 KDM3BQ7LBC6 1761 aa17.6■□□□□ 0.41
SNRNP200-204ENST00000480615 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
SNRNP200-204ENST00000480615 ZNF496Q96IT1 587 aaPredicted RBP17.59■□□□□ 0.41
SNRNP200-204ENST00000480615 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
SNRNP200-204ENST00000480615 C5P01031 1676 aa17.59■□□□□ 0.41
SNRNP200-204ENST00000480615 SLC27A3Q5K4L6 730 aa17.58■□□□□ 0.41
SNRNP200-204ENST00000480615 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.4
SNRNP200-204ENST00000480615 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNRNP200-204ENST00000480615 ITPK1Q13572 414 aa17.58■□□□□ 0.4
SNRNP200-204ENST00000480615 CCDC27Q2M243 656 aa17.58■□□□□ 0.4
SNRNP200-204ENST00000480615 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
SNRNP200-204ENST00000480615 TJP1Q07157 1748 aa17.56■□□□□ 0.4
SNRNP200-204ENST00000480615 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
SNRNP200-204ENST00000480615 DNAJC10Q8IXB1 793 aa17.55■□□□□ 0.4
SNRNP200-204ENST00000480615 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
SNRNP200-204ENST00000480615 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
SNRNP200-204ENST00000480615 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
SNRNP200-204ENST00000480615 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
SNRNP200-204ENST00000480615 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
SNRNP200-204ENST00000480615 CHL1O00533 1208 aa17.54■□□□□ 0.4
SNRNP200-204ENST00000480615 TSR2Q969E8 191 aaKnown RBP17.54■□□□□ 0.4
SNRNP200-204ENST00000480615 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
SNRNP200-204ENST00000480615 GNAI1P63096 354 aa17.54■□□□□ 0.4
SNRNP200-204ENST00000480615 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
SNRNP200-204ENST00000480615 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
SNRNP200-204ENST00000480615 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
SNRNP200-204ENST00000480615 C4BP0C0L5 1744 aa17.53■□□□□ 0.4
SNRNP200-204ENST00000480615 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
SNRNP200-204ENST00000480615 EIF4A1P60842 406 aaKnown RBP17.53■□□□□ 0.4
SNRNP200-204ENST00000480615 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
SNRNP200-204ENST00000480615 PSDA5PKW4 1024 aaPredicted RBP17.52■□□□□ 0.4
SNRNP200-204ENST00000480615 NBPF14Q5TI25 921 aa17.52■□□□□ 0.4
SNRNP200-204ENST00000480615 SMIM5Q71RC9 77 aa17.52■□□□□ 0.4
SNRNP200-204ENST00000480615 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
SNRNP200-204ENST00000480615 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
SNRNP200-204ENST00000480615 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.39
SNRNP200-204ENST00000480615 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
SNRNP200-204ENST00000480615 R3HDM1Q15032 1099 aaKnown RBP17.51■□□□□ 0.39
SNRNP200-204ENST00000480615 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SNRNP200-204ENST00000480615 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
SNRNP200-204ENST00000480615 STK32BQ9NY57 414 aa17.51■□□□□ 0.39
SNRNP200-204ENST00000480615 TFCP2L1Q9NZI6 479 aa17.51■□□□□ 0.39
SNRNP200-204ENST00000480615 AK7Q96M32 723 aa17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 TUBGCP6Q96RT7 1819 aa17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 ZNF521Q96K83 1311 aa17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 MYH14Q7Z406 1995 aaKnown RBP17.5■□□□□ 0.39
SNRNP200-204ENST00000480615 GNPATO15228 680 aa17.49■□□□□ 0.39
SNRNP200-204ENST00000480615 PHF14O94880 888 aa17.49■□□□□ 0.39
SNRNP200-204ENST00000480615 CYP19A1P11511 503 aaPredicted RBP17.49■□□□□ 0.39
SNRNP200-204ENST00000480615 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
SNRNP200-204ENST00000480615 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
SNRNP200-204ENST00000480615 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms