RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
LINC00173-203ENST00000480237 TSR2Q969E8 191 aaKnown RBP13.53□□□□□ -0.24
LINC00173-203ENST00000480237 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
LINC00173-203ENST00000480237 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
LINC00173-203ENST00000480237 MEGF6O75095 1541 aa13.52□□□□□ -0.24
LINC00173-203ENST00000480237 RTF1Q92541 710 aaKnown RBP13.52□□□□□ -0.25
LINC00173-203ENST00000480237 C5P01031 1676 aa13.51□□□□□ -0.25
LINC00173-203ENST00000480237 GNAI1P63096 354 aa13.51□□□□□ -0.25
LINC00173-203ENST00000480237 DCTN1Q14203 1278 aa13.51□□□□□ -0.25
LINC00173-203ENST00000480237 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
LINC00173-203ENST00000480237 NLRP2Q9NX02 1062 aa13.51□□□□□ -0.25
LINC00173-203ENST00000480237 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
LINC00173-203ENST00000480237 GNAT3A8MTJ3 354 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 MCM10Q7L590 875 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
LINC00173-203ENST00000480237 WDR17Q8IZU2 1322 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 UBR2Q8IWV8 1755 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 OVOS2A0A0G2JMS6 1433 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 CRB1P82279 1406 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 EXOSC9Q06265 439 aaKnown RBP13.49□□□□□ -0.25
LINC00173-203ENST00000480237 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
LINC00173-203ENST00000480237 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
LINC00173-203ENST00000480237 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
LINC00173-203ENST00000480237 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-203ENST00000480237 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
LINC00173-203ENST00000480237 RAPGEF4Q8WZA2 1011 aa13.48□□□□□ -0.25
LINC00173-203ENST00000480237 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
LINC00173-203ENST00000480237 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
LINC00173-203ENST00000480237 AMOTQ4VCS5 1084 aa13.47□□□□□ -0.25
LINC00173-203ENST00000480237 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
LINC00173-203ENST00000480237 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
LINC00173-203ENST00000480237 MBIPQ9NS73 344 aa13.47□□□□□ -0.25
LINC00173-203ENST00000480237 ZNF853P0CG23 659 aa13.46□□□□□ -0.25
LINC00173-203ENST00000480237 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.25
LINC00173-203ENST00000480237 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.25
LINC00173-203ENST00000480237 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
LINC00173-203ENST00000480237 PLIN1O60240 522 aa13.45□□□□□ -0.26
LINC00173-203ENST00000480237 CANXP27824 592 aaKnown RBP13.45□□□□□ -0.26
LINC00173-203ENST00000480237 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
LINC00173-203ENST00000480237 STRN4Q9NRL3 753 aa13.45□□□□□ -0.26
LINC00173-203ENST00000480237 BCAR3O75815 825 aa13.45□□□□□ -0.26
LINC00173-203ENST00000480237 EVA1CP58658 441 aa13.45□□□□□ -0.26
LINC00173-203ENST00000480237 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
LINC00173-203ENST00000480237 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
LINC00173-203ENST00000480237 AFDNP55196 1824 aaKnown RBP13.44□□□□□ -0.26
LINC00173-203ENST00000480237 PSEN1P49768 467 aa13.44□□□□□ -0.26
LINC00173-203ENST00000480237 RARSP54136 660 aaKnown RBP13.44□□□□□ -0.26
LINC00173-203ENST00000480237 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
LINC00173-203ENST00000480237 MRC1P22897 1456 aa13.44□□□□□ -0.26
LINC00173-203ENST00000480237 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
LINC00173-203ENST00000480237 CEMIPQ8WUJ3 1361 aa13.43□□□□□ -0.26
LINC00173-203ENST00000480237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
LINC00173-203ENST00000480237 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
LINC00173-203ENST00000480237 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
LINC00173-203ENST00000480237 BTG4Q9NY30 223 aa13.42□□□□□ -0.26
LINC00173-203ENST00000480237 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
LINC00173-203ENST00000480237 SPG7Q9UQ90 795 aa13.42□□□□□ -0.26
LINC00173-203ENST00000480237 JCADQ9P266 1359 aa13.42□□□□□ -0.26
LINC00173-203ENST00000480237 CHL1O00533 1208 aa13.41□□□□□ -0.26
LINC00173-203ENST00000480237 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
LINC00173-203ENST00000480237 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
LINC00173-203ENST00000480237 KDM6AO15550 1401 aaPredicted RBP13.41□□□□□ -0.26
LINC00173-203ENST00000480237 NUTM2BA6NNL0 878 aaPredicted RBP13.41□□□□□ -0.26
LINC00173-203ENST00000480237 NUTM2EB1AL46 878 aaPredicted RBP13.41□□□□□ -0.26
LINC00173-203ENST00000480237 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
LINC00173-203ENST00000480237 TWISTNBQ3B726 338 aaPredicted RBP13.41□□□□□ -0.26
LINC00173-203ENST00000480237 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
LINC00173-203ENST00000480237 NUTM2AQ8IVF1 878 aaPredicted RBP13.41□□□□□ -0.26
LINC00173-203ENST00000480237 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
LINC00173-203ENST00000480237 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
LINC00173-203ENST00000480237 SBF2Q86WG5 1849 aa13.4□□□□□ -0.26
LINC00173-203ENST00000480237 TEFQ10587 303 aa13.4□□□□□ -0.26
LINC00173-203ENST00000480237 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
LINC00173-203ENST00000480237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC00173-203ENST00000480237 LRP6O75581 1613 aa13.4□□□□□ -0.27
LINC00173-203ENST00000480237 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
LINC00173-203ENST00000480237 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
LINC00173-203ENST00000480237 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
LINC00173-203ENST00000480237 CRBNQ96SW2 442 aa13.39□□□□□ -0.27
LINC00173-203ENST00000480237 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
LINC00173-203ENST00000480237 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
LINC00173-203ENST00000480237 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 ELL2O00472 640 aaPredicted RBP13.38□□□□□ -0.27
LINC00173-203ENST00000480237 STK25O00506 426 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
LINC00173-203ENST00000480237 IL2RBP14784 551 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 TAF7Q15545 349 aaPredicted RBP13.38□□□□□ -0.27
LINC00173-203ENST00000480237 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 TSPYL6Q8N831 410 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 EXOC6Q8TAG9 804 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 BABAM1Q9NWV8 329 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 SLIT2O94813 1529 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 GLI3P10071 1580 aa13.38□□□□□ -0.27
LINC00173-203ENST00000480237 VAMP4O75379 141 aa13.37□□□□□ -0.27
LINC00173-203ENST00000480237 PHKG2P15735 406 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms