RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TMPOP42166 694 aaKnown RBP26.06■■□□□ 1.76
LIME1-205ENST00000480139 EZH2Q15910 746 aaKnown RBP26.06■■□□□ 1.76
LIME1-205ENST00000480139 NFATC2IPQ8NCF5 419 aa26.05■■□□□ 1.76
LIME1-205ENST00000480139 SMARCC1Q92922 1105 aaPredicted RBP26.05■■□□□ 1.76
LIME1-205ENST00000480139 PALLDQ8WX93 1383 aa26.04■■□□□ 1.76
LIME1-205ENST00000480139 ZNF831Q5JPB2 1677 aa26.03■■□□□ 1.76
LIME1-205ENST00000480139 MIER1Q8N108 512 aa26.03■■□□□ 1.76
LIME1-205ENST00000480139 RIPK4P57078 832 aa26.02■■□□□ 1.76
LIME1-205ENST00000480139 LMOD3Q0VAK6 560 aa26.02■■□□□ 1.76
LIME1-205ENST00000480139 TEFQ10587 303 aa26.02■■□□□ 1.76
LIME1-205ENST00000480139 TXNRD1Q16881 649 aa26.01■■□□□ 1.75
LIME1-205ENST00000480139 SLC27A3Q5K4L6 730 aa26.01■■□□□ 1.75
LIME1-205ENST00000480139 MCM10Q7L590 875 aa26.01■■□□□ 1.75
LIME1-205ENST00000480139 PROM2Q8N271 834 aa26.01■■□□□ 1.75
LIME1-205ENST00000480139 ATG3Q9NT62 314 aa26.01■■□□□ 1.75
LIME1-205ENST00000480139 ASAP1Q9ULH1 1129 aa26■■□□□ 1.75
LIME1-205ENST00000480139 UBR2Q8IWV8 1755 aa26■■□□□ 1.75
LIME1-205ENST00000480139 CICQ96RK0 1608 aaPredicted RBP25.99■■□□□ 1.75
LIME1-205ENST00000480139 APAF1O14727 1248 aa25.98■■□□□ 1.75
LIME1-205ENST00000480139 FAM9BQ8IZU0 186 aa25.98■■□□□ 1.75
LIME1-205ENST00000480139 DCTN1Q14203 1278 aa25.97■■□□□ 1.75
LIME1-205ENST00000480139 NCBP3Q53F19 620 aaKnown RBP25.97■■□□□ 1.75
LIME1-205ENST00000480139 RRP7AQ9Y3A4 280 aaKnown RBP25.97■■□□□ 1.75
LIME1-205ENST00000480139 C5P01031 1676 aa25.96■■□□□ 1.75
LIME1-205ENST00000480139 TAF1LQ8IZX4 1826 aa25.96■■□□□ 1.75
LIME1-205ENST00000480139 HMGB2P26583 209 aaKnown RBP25.95■■□□□ 1.74
LIME1-205ENST00000480139 TRIM35Q9UPQ4 493 aa25.95■■□□□ 1.74
LIME1-205ENST00000480139 KCPQ6ZWJ8 1503 aa25.94■■□□□ 1.74
LIME1-205ENST00000480139 NEUROD2Q15784 382 aa25.94■■□□□ 1.74
LIME1-205ENST00000480139 CCNL1Q9UK58 526 aaPredicted RBP25.94■■□□□ 1.74
LIME1-205ENST00000480139 KDM3BQ7LBC6 1761 aa25.94■■□□□ 1.74
LIME1-205ENST00000480139 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
LIME1-205ENST00000480139 SIK1P57059 783 aa25.93■■□□□ 1.74
LIME1-205ENST00000480139 LRRC4BQ9NT99 713 aa25.93■■□□□ 1.74
LIME1-205ENST00000480139 TAF7Q15545 349 aaPredicted RBP25.92■■□□□ 1.74
LIME1-205ENST00000480139 BTBD11A6QL63 1104 aa25.91■■□□□ 1.74
LIME1-205ENST00000480139 COL5A3P25940 1745 aaPredicted RBP25.91■■□□□ 1.74
LIME1-205ENST00000480139 SLC39A6Q13433 755 aa25.9■■□□□ 1.74
LIME1-205ENST00000480139 CCDC27Q2M243 656 aa25.9■■□□□ 1.74
LIME1-205ENST00000480139 ZNF790Q6PG37 636 aa25.9■■□□□ 1.74
LIME1-205ENST00000480139 THUMPD2Q9BTF0 503 aaKnown RBP25.9■■□□□ 1.74
LIME1-205ENST00000480139 TJP1Q07157 1748 aa25.9■■□□□ 1.74
LIME1-205ENST00000480139 TTC5Q8N0Z6 440 aa25.89■■□□□ 1.74
LIME1-205ENST00000480139 NGEFQ8N5V2 710 aa25.89■■□□□ 1.74
LIME1-205ENST00000480139 NBPF14Q5TI25 921 aa25.88■■□□□ 1.73
LIME1-205ENST00000480139 BABAM1Q9NWV8 329 aa25.88■■□□□ 1.73
LIME1-205ENST00000480139 SLC4A9Q96Q91 983 aa25.87■■□□□ 1.73
LIME1-205ENST00000480139 RBM42Q9BTD8 480 aaKnown RBP25.87■■□□□ 1.73
LIME1-205ENST00000480139 C4BP0C0L5 1744 aa25.87■■□□□ 1.73
LIME1-205ENST00000480139 QSER1Q2KHR3 1735 aa25.86■■□□□ 1.73
LIME1-205ENST00000480139 PTCD1O75127 700 aaKnown RBP25.86■■□□□ 1.73
LIME1-205ENST00000480139 ATP6V1AP38606 617 aa25.86■■□□□ 1.73
LIME1-205ENST00000480139 VSIG10Q8N0Z9 540 aa25.86■■□□□ 1.73
LIME1-205ENST00000480139 KCNQ4P56696 695 aa25.85■■□□□ 1.73
LIME1-205ENST00000480139 CALD1Q05682 793 aaKnown RBP25.85■■□□□ 1.73
LIME1-205ENST00000480139 ITPK1Q13572 414 aa25.84■■□□□ 1.73
LIME1-205ENST00000480139 ANO8Q9HCE9 1232 aaPredicted RBP25.84■■□□□ 1.73
LIME1-205ENST00000480139 AKT1S1Q96B36 256 aa25.83■■□□□ 1.73
LIME1-205ENST00000480139 ZNF496Q96IT1 587 aaPredicted RBP25.83■■□□□ 1.73
LIME1-205ENST00000480139 FMNL2Q96PY5 1086 aa25.83■■□□□ 1.73
LIME1-205ENST00000480139 HEG1Q9ULI3 1381 aa25.82■■□□□ 1.72
LIME1-205ENST00000480139 STK32BQ9NY57 414 aa25.82■■□□□ 1.72
LIME1-205ENST00000480139 TUBGCP6Q96RT7 1819 aa25.81■■□□□ 1.72
LIME1-205ENST00000480139 SLC15A2Q16348 729 aa25.81■■□□□ 1.72
LIME1-205ENST00000480139 WWC1Q8IX03 1113 aa25.81■■□□□ 1.72
LIME1-205ENST00000480139 KCNQ3O43525 872 aa25.8■■□□□ 1.72
LIME1-205ENST00000480139 LINC00116Q8NCU8 138 aa25.8■■□□□ 1.72
LIME1-205ENST00000480139 CHL1O00533 1208 aa25.79■■□□□ 1.72
LIME1-205ENST00000480139 ZNF827Q17R98 1081 aa25.79■■□□□ 1.72
LIME1-205ENST00000480139 CFAP44Q96MT7 982 aa25.79■■□□□ 1.72
LIME1-205ENST00000480139 MIS18AQ9NYP9 233 aa25.79■■□□□ 1.72
LIME1-205ENST00000480139 TSPYL4Q9UJ04 414 aa25.79■■□□□ 1.72
LIME1-205ENST00000480139 UBR3Q6ZT12 1888 aa25.79■■□□□ 1.72
LIME1-205ENST00000480139 LAMB4A4D0S4 1761 aa25.78■■□□□ 1.72
LIME1-205ENST00000480139 ZNF853P0CG23 659 aa25.78■■□□□ 1.72
LIME1-205ENST00000480139 TEX13AQ9BXU3 409 aaPredicted RBP25.78■■□□□ 1.72
LIME1-205ENST00000480139 IFT57Q9NWB7 429 aa25.78■■□□□ 1.72
LIME1-205ENST00000480139 CNTNAP4Q9C0A0 1308 aa25.78■■□□□ 1.72
LIME1-205ENST00000480139 RC3H1Q5TC82 1133 aaKnown RBP25.77■■□□□ 1.72
LIME1-205ENST00000480139 IL16Q14005 1332 aa25.77■■□□□ 1.72
LIME1-205ENST00000480139 EIF4A1P60842 406 aaKnown RBP25.76■■□□□ 1.71
LIME1-205ENST00000480139 GNAI1P63096 354 aa25.76■■□□□ 1.71
LIME1-205ENST00000480139 CASZ1Q86V15 1759 aa25.76■■□□□ 1.71
LIME1-205ENST00000480139 MYH14Q7Z406 1995 aaKnown RBP25.76■■□□□ 1.71
LIME1-205ENST00000480139 R3HDM1Q15032 1099 aaKnown RBP25.75■■□□□ 1.71
LIME1-205ENST00000480139 WDR63Q8IWG1 891 aa25.75■■□□□ 1.71
LIME1-205ENST00000480139 DNAJC10Q8IXB1 793 aa25.75■■□□□ 1.71
LIME1-205ENST00000480139 SENP3-EIF4A1A0A087X0R7 540 aa25.74■■□□□ 1.71
LIME1-205ENST00000480139 SNRPA1P09661 255 aaKnown RBP25.74■■□□□ 1.71
LIME1-205ENST00000480139 AK7Q96M32 723 aa25.74■■□□□ 1.71
LIME1-205ENST00000480139 CYP19A1P11511 503 aaPredicted RBP25.73■■□□□ 1.71
LIME1-205ENST00000480139 TFCP2L1Q9NZI6 479 aa25.73■■□□□ 1.71
LIME1-205ENST00000480139 ZNF521Q96K83 1311 aa25.72■■□□□ 1.71
LIME1-205ENST00000480139 STARD3NLO95772 234 aa25.72■■□□□ 1.71
LIME1-205ENST00000480139 CRKLP46109 303 aaKnown RBP25.72■■□□□ 1.71
LIME1-205ENST00000480139 LAS1LQ9Y4W2 734 aaKnown RBP25.72■■□□□ 1.71
LIME1-205ENST00000480139 SALL2Q9Y467 1007 aaPredicted RBP25.71■■□□□ 1.71
LIME1-205ENST00000480139 PNPLA7Q6ZV29 1317 aa25.7■■□□□ 1.71
LIME1-205ENST00000480139 PSDA5PKW4 1024 aaPredicted RBP25.7■■□□□ 1.7
LIME1-205ENST00000480139 GIGYF1O75420 1035 aaPredicted RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms