RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 RAB3GAP1Q15042 981 aa22.29■■□□□ 1.16
PDE8A-204ENST00000478717 RPAP2Q8IXW5 612 aaPredicted RBP22.29■■□□□ 1.16
PDE8A-204ENST00000478717 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
PDE8A-204ENST00000478717 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
PDE8A-204ENST00000478717 ATP10DQ9P241 1426 aa22.28■■□□□ 1.16
PDE8A-204ENST00000478717 RTL1A6NKG5 1358 aa22.28■■□□□ 1.16
PDE8A-204ENST00000478717 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
PDE8A-204ENST00000478717 UQCRHLA0A096LP55 91 aa22.28■■□□□ 1.16
PDE8A-204ENST00000478717 UQCRHP07919 91 aa22.28■■□□□ 1.16
PDE8A-204ENST00000478717 ANP32BQ92688 251 aaKnown RBP22.28■■□□□ 1.16
PDE8A-204ENST00000478717 KDRP35968 1356 aa22.27■■□□□ 1.16
PDE8A-204ENST00000478717 HOXC9P31274 260 aa22.27■■□□□ 1.16
PDE8A-204ENST00000478717 GAS2L2Q8NHY3 880 aa22.27■■□□□ 1.16
PDE8A-204ENST00000478717 DDX49Q9Y6V7 483 aaKnown RBP22.27■■□□□ 1.16
PDE8A-204ENST00000478717 CDC45O75419 566 aa22.26■■□□□ 1.15
PDE8A-204ENST00000478717 NCLP19338 710 aaKnown RBP22.26■■□□□ 1.15
PDE8A-204ENST00000478717 USHBP1Q8N6Y0 703 aa22.26■■□□□ 1.15
PDE8A-204ENST00000478717 SKOR2Q2VWA4 1001 aaPredicted RBP22.25■■□□□ 1.15
PDE8A-204ENST00000478717 SNX21Q969T3 373 aa22.25■■□□□ 1.15
PDE8A-204ENST00000478717 TTC22Q5TAA0 569 aa22.25■■□□□ 1.15
PDE8A-204ENST00000478717 NCOA3Q9Y6Q9 1424 aa22.24■■□□□ 1.15
PDE8A-204ENST00000478717 GNAT3A8MTJ3 354 aa22.23■■□□□ 1.15
PDE8A-204ENST00000478717 IL17REQ8NFR9 667 aa22.23■■□□□ 1.15
PDE8A-204ENST00000478717 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.23■■□□□ 1.15
PDE8A-204ENST00000478717 PIK3C2AO00443 1686 aa22.22■■□□□ 1.15
PDE8A-204ENST00000478717 STK31Q9BXU1 1019 aa22.22■■□□□ 1.15
PDE8A-204ENST00000478717 JARID2Q92833 1246 aaPredicted RBP22.21■■□□□ 1.15
PDE8A-204ENST00000478717 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.14
PDE8A-204ENST00000478717 SDSP20132 328 aa22.2■■□□□ 1.14
PDE8A-204ENST00000478717 TRHP20396 242 aaPredicted RBP22.2■■□□□ 1.14
PDE8A-204ENST00000478717 CAVIN1Q6NZI2 390 aaKnown RBP22.19■■□□□ 1.14
PDE8A-204ENST00000478717 FLIIQ13045 1269 aa22.19■■□□□ 1.14
PDE8A-204ENST00000478717 CCT4P50991 539 aaKnown RBP22.18■■□□□ 1.14
PDE8A-204ENST00000478717 RBSNQ9H1K0 784 aa22.18■■□□□ 1.14
PDE8A-204ENST00000478717 FMN2Q9NZ56 1722 aa22.18■■□□□ 1.14
PDE8A-204ENST00000478717 EXOC6BQ9Y2D4 811 aa22.18■■□□□ 1.14
PDE8A-204ENST00000478717 CIZ1Q9ULV3 898 aaPredicted RBP22.17■■□□□ 1.14
PDE8A-204ENST00000478717 CCDC30Q5VVM6 783 aa22.17■■□□□ 1.14
PDE8A-204ENST00000478717 PHF8Q9UPP1 1060 aa22.17■■□□□ 1.14
PDE8A-204ENST00000478717 FER1L4A9Z1Z3 1794 aa22.17■■□□□ 1.14
PDE8A-204ENST00000478717 HTATSF1O43719 755 aaKnown RBP22.16■■□□□ 1.14
PDE8A-204ENST00000478717 MCTP1Q6DN14 999 aa22.16■■□□□ 1.14
PDE8A-204ENST00000478717 BAG4O95429 457 aaKnown RBP22.16■■□□□ 1.14
PDE8A-204ENST00000478717 K7ELQ4 463 aaPredicted RBP22.15■■□□□ 1.14
PDE8A-204ENST00000478717 HMMRO75330 724 aa22.15■■□□□ 1.14
PDE8A-204ENST00000478717 TSHZ3Q63HK5 1081 aa22.15■■□□□ 1.14
PDE8A-204ENST00000478717 MAP7D2Q96T17 732 aa22.15■■□□□ 1.14
PDE8A-204ENST00000478717 NOL7Q9UMY1 257 aaKnown RBP22.15■■□□□ 1.14
PDE8A-204ENST00000478717 GNAI2P04899 355 aa22.15■■□□□ 1.14
PDE8A-204ENST00000478717 TAF7Q15545 349 aaPredicted RBP22.15■■□□□ 1.14
PDE8A-204ENST00000478717 USP26Q9BXU7 913 aa22.15■■□□□ 1.14
PDE8A-204ENST00000478717 KLHL40Q2TBA0 621 aa22.15■■□□□ 1.14
PDE8A-204ENST00000478717 ANKARQ7Z5J8 1434 aa22.14■■□□□ 1.14
PDE8A-204ENST00000478717 TERF1P54274 439 aa22.14■■□□□ 1.13
PDE8A-204ENST00000478717 TSC1Q92574 1164 aa22.14■■□□□ 1.13
PDE8A-204ENST00000478717 GOLGA6L22H0YM25 854 aa22.14■■□□□ 1.13
PDE8A-204ENST00000478717 PNMA6EA0A0J9YXQ4 647 aa22.13■■□□□ 1.13
PDE8A-204ENST00000478717 PRIM1P49642 420 aaKnown RBP22.13■■□□□ 1.13
PDE8A-204ENST00000478717 ESCO1Q5FWF5 840 aa22.13■■□□□ 1.13
PDE8A-204ENST00000478717 MAP3K5Q99683 1374 aa22.13■■□□□ 1.13
PDE8A-204ENST00000478717 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
PDE8A-204ENST00000478717 SMAP1Q8IYB5 467 aaPredicted RBP22.13■■□□□ 1.13
PDE8A-204ENST00000478717 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
PDE8A-204ENST00000478717 RBM27Q9P2N5 1060 aaKnown RBP22.13■■□□□ 1.13
PDE8A-204ENST00000478717 AK9Q5TCS8 1911 aa22.12■■□□□ 1.13
PDE8A-204ENST00000478717 XRN1Q8IZH2 1706 aaKnown RBP22.12■■□□□ 1.13
PDE8A-204ENST00000478717 ZSCAN23Q3MJ62 389 aa22.12■■□□□ 1.13
PDE8A-204ENST00000478717 CHAMP1Q96JM3 812 aa22.12■■□□□ 1.13
PDE8A-204ENST00000478717 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
PDE8A-204ENST00000478717 PSME1Q06323 249 aa22.11■■□□□ 1.13
PDE8A-204ENST00000478717 LGR6Q9HBX8 967 aa22.11■■□□□ 1.13
PDE8A-204ENST00000478717 SETD1BQ9UPS6 1966 aaKnown RBP22.11■■□□□ 1.13
PDE8A-204ENST00000478717 NWD1Q149M9 1564 aa22.11■■□□□ 1.13
PDE8A-204ENST00000478717 ZNF500O60304 480 aaPredicted RBP22.11■■□□□ 1.13
PDE8A-204ENST00000478717 PDE1AP54750 535 aa22.11■■□□□ 1.13
PDE8A-204ENST00000478717 ANKLE2Q86XL3 938 aa22.11■■□□□ 1.13
PDE8A-204ENST00000478717 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
PDE8A-204ENST00000478717 PKP1Q13835 747 aa22.1■■□□□ 1.13
PDE8A-204ENST00000478717 MPNDQ8N594 471 aa22.1■■□□□ 1.13
PDE8A-204ENST00000478717 HDGFL1Q5TGJ6 251 aa22.09■■□□□ 1.13
PDE8A-204ENST00000478717 LRRFIP2Q9Y608 721 aaKnown RBP22.09■■□□□ 1.13
PDE8A-204ENST00000478717 IP6K1Q92551 441 aa22.08■■□□□ 1.13
PDE8A-204ENST00000478717 LRRC59Q96AG4 307 aaKnown RBP22.08■■□□□ 1.13
PDE8A-204ENST00000478717 GNAI3P08754 354 aa22.08■■□□□ 1.12
PDE8A-204ENST00000478717 CASC1Q6TDU7 716 aa22.08■■□□□ 1.12
PDE8A-204ENST00000478717 USP44Q9H0E7 712 aa22.07■■□□□ 1.12
PDE8A-204ENST00000478717 ZKSCAN5Q9Y2L8 839 aa22.07■■□□□ 1.12
PDE8A-204ENST00000478717 PTMSP20962 102 aa22.07■■□□□ 1.12
PDE8A-204ENST00000478717 MARF1Q9Y4F3 1742 aaKnown RBP22.06■■□□□ 1.12
PDE8A-204ENST00000478717 FAM177BA6PVY3 158 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 DYNC1I1O14576 645 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 KCNQ3O43525 872 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 ATP8B2P98198 1209 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 RABEP1Q15276 862 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 ZNF445P59923 1031 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 RNF214Q8ND24 703 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 LRRCC1Q9C099 1032 aa22.06■■□□□ 1.12
PDE8A-204ENST00000478717 FGD1P98174 961 aa22.05■■□□□ 1.12
PDE8A-204ENST00000478717 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
PDE8A-204ENST00000478717 PDLIM2Q96JY6 352 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms