RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
ABCF1-205ENST00000475993 FAM53CQ9NYF3 392 aa12.66□□□□□ -0.38
ABCF1-205ENST00000475993 TET3O43151 1660 aa12.66□□□□□ -0.38
ABCF1-205ENST00000475993 KIF24Q5T7B8 1368 aa12.66□□□□□ -0.38
ABCF1-205ENST00000475993 WDR33Q9C0J8 1336 aaKnown RBP12.66□□□□□ -0.38
ABCF1-205ENST00000475993 RSPH14Q9UHP6 348 aa12.66□□□□□ -0.38
ABCF1-205ENST00000475993 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
ABCF1-205ENST00000475993 CARD10Q9BWT7 1032 aa12.65□□□□□ -0.38
ABCF1-205ENST00000475993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.65□□□□□ -0.389e-7■■■□□ 17.5
ABCF1-205ENST00000475993 FAM43BQ6ZT52 329 aaPredicted RBP12.65□□□□□ -0.38
ABCF1-205ENST00000475993 SPAG9O60271 1321 aaKnown RBP12.64□□□□□ -0.39
ABCF1-205ENST00000475993 FOXD4L6Q3SYB3 417 aaPredicted RBP12.64□□□□□ -0.39
ABCF1-205ENST00000475993 FOXD4L3Q6VB84 417 aaPredicted RBP12.64□□□□□ -0.39
ABCF1-205ENST00000475993 UBE2HP62256 183 aa12.64□□□□□ -0.39
ABCF1-205ENST00000475993 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
ABCF1-205ENST00000475993 PAXBP1Q9Y5B6 917 aa12.64□□□□□ -0.39
ABCF1-205ENST00000475993 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
ABCF1-205ENST00000475993 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
ABCF1-205ENST00000475993 NAA30Q147X3 362 aaPredicted RBP12.63□□□□□ -0.39
ABCF1-205ENST00000475993 CREBRFQ8IUR6 639 aa12.63□□□□□ -0.39
ABCF1-205ENST00000475993 SRCIN1Q9C0H9 1055 aa12.63□□□□□ -0.39
ABCF1-205ENST00000475993 RGS12O14924 1447 aa12.63□□□□□ -0.39
ABCF1-205ENST00000475993 ATP10DQ9P241 1426 aa12.63□□□□□ -0.39
ABCF1-205ENST00000475993 PTGS1P23219 599 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
ABCF1-205ENST00000475993 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 ANKRD44Q8N8A2 993 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 IL17RAQ96F46 866 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 PUS7Q96PZ0 661 aaKnown RBP12.62□□□□□ -0.39
ABCF1-205ENST00000475993 ANAPC15P60006 121 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 C16orf45Q96MC5 204 aaPredicted RBP12.62□□□□□ -0.39
ABCF1-205ENST00000475993 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
ABCF1-205ENST00000475993 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
ABCF1-205ENST00000475993 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
ABCF1-205ENST00000475993 GPATCH11Q8N954 259 aa12.61□□□□□ -0.39
ABCF1-205ENST00000475993 CCDC112Q8NEF3 446 aa12.61□□□□□ -0.39
ABCF1-205ENST00000475993 ZNF397Q8NF99 534 aaPredicted RBP12.61□□□□□ -0.39
ABCF1-205ENST00000475993 MYCBPQ99417 103 aaPredicted RBP12.61□□□□□ -0.39
ABCF1-205ENST00000475993 TNNT1P13805 278 aa12.61□□□□□ -0.39
ABCF1-205ENST00000475993 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
ABCF1-205ENST00000475993 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
ABCF1-205ENST00000475993 TRAK1Q9UPV9 953 aa12.61□□□□□ -0.39
ABCF1-205ENST00000475993 PLCH2O75038 1416 aa12.61□□□□□ -0.39
ABCF1-205ENST00000475993 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
ABCF1-205ENST00000475993 KIF1BO60333 1816 aa12.6□□□□□ -0.39
ABCF1-205ENST00000475993 NOP2P46087 812 aaKnown RBP12.6□□□□□ -0.39
ABCF1-205ENST00000475993 HNRNPH2P55795 449 aaKnown RBP12.6□□□□□ -0.39
ABCF1-205ENST00000475993 OSBPL3Q9H4L5 887 aa12.6□□□□□ -0.39
ABCF1-205ENST00000475993 PALD1Q9ULE6 856 aa12.6□□□□□ -0.39
ABCF1-205ENST00000475993 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
ABCF1-205ENST00000475993 DHX16O60231 1041 aaKnown RBP12.59□□□□□ -0.39
ABCF1-205ENST00000475993 RPAP2Q8IXW5 612 aaPredicted RBP12.59□□□□□ -0.39
ABCF1-205ENST00000475993 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
ABCF1-205ENST00000475993 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
ABCF1-205ENST00000475993 ADGRB1O14514 1584 aa12.59□□□□□ -0.39
ABCF1-205ENST00000475993 MCCP23508 829 aa12.59□□□□□ -0.39
ABCF1-205ENST00000475993 RAD51AP2Q09MP3 1159 aa12.59□□□□□ -0.39
ABCF1-205ENST00000475993 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
ABCF1-205ENST00000475993 CHD1O14646 1710 aa12.58□□□□□ -0.39
ABCF1-205ENST00000475993 PNPLA6Q8IY17 1366 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 ZSCAN22P10073 491 aaPredicted RBP12.58□□□□□ -0.4
ABCF1-205ENST00000475993 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
ABCF1-205ENST00000475993 LRMPQ12912 555 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 CEP85Q6P2H3 762 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 NCAPGQ9BPX3 1015 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 FCHSD2O94868 740 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 CCDC186Q7Z3E2 898 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
ABCF1-205ENST00000475993 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 CDC42BPGQ6DT37 1551 aa12.58□□□□□ -0.4
ABCF1-205ENST00000475993 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
ABCF1-205ENST00000475993 CCDC192P0DO97 292 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 KIF1BPQ96EK5 621 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 CYP2C19P33261 490 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 ZSCAN25Q6NSZ9 544 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 TULP4Q9NRJ4 1543 aa12.57□□□□□ -0.4
ABCF1-205ENST00000475993 GYS2P54840 703 aa12.56□□□□□ -0.4
ABCF1-205ENST00000475993 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
ABCF1-205ENST00000475993 PDE1AP54750 535 aa12.56□□□□□ -0.4
ABCF1-205ENST00000475993 GNAI1P63096 354 aa12.56□□□□□ -0.4
ABCF1-205ENST00000475993 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
ABCF1-205ENST00000475993 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
ABCF1-205ENST00000475993 ABCC1P33527 1531 aa12.56□□□□□ -0.4
ABCF1-205ENST00000475993 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
ABCF1-205ENST00000475993 FBXO38Q6PIJ6 1188 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 RASSF4Q9H2L5 321 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 EVC2Q86UK5 1308 aa12.55□□□□□ -0.4
ABCF1-205ENST00000475993 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms