RNA–Protein interactions for RNA: ENST00000475889.1

PKD1-212, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 511 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-212ENST00000475889 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
PKD1-212ENST00000475889 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
PKD1-212ENST00000475889 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
PKD1-212ENST00000475889 RIPK4P57078 832 aa17.19■□□□□ 0.34
PKD1-212ENST00000475889 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
PKD1-212ENST00000475889 RREB1Q92766 1687 aa17.18■□□□□ 0.34
PKD1-212ENST00000475889 APAF1O14727 1248 aa17.18■□□□□ 0.34
PKD1-212ENST00000475889 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
PKD1-212ENST00000475889 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
PKD1-212ENST00000475889 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
PKD1-212ENST00000475889 ATG3Q9NT62 314 aa17.18■□□□□ 0.34
PKD1-212ENST00000475889 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
PKD1-212ENST00000475889 TXNRD1Q16881 649 aa17.17■□□□□ 0.34
PKD1-212ENST00000475889 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
PKD1-212ENST00000475889 LY75O60449 1722 aa17.16■□□□□ 0.34
PKD1-212ENST00000475889 SENP3-EIF4A1A0A087X0R7 540 aa17.16■□□□□ 0.34
PKD1-212ENST00000475889 TEFQ10587 303 aa17.16■□□□□ 0.34
PKD1-212ENST00000475889 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
PKD1-212ENST00000475889 KCNQ4P56696 695 aa17.15■□□□□ 0.34
PKD1-212ENST00000475889 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
PKD1-212ENST00000475889 LRRC4BQ9NT99 713 aa17.15■□□□□ 0.34
PKD1-212ENST00000475889 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
PKD1-212ENST00000475889 NUP188Q5SRE5 1749 aa17.15■□□□□ 0.34
PKD1-212ENST00000475889 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
PKD1-212ENST00000475889 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
PKD1-212ENST00000475889 LMOD3Q0VAK6 560 aa17.12■□□□□ 0.33
PKD1-212ENST00000475889 CCNL1Q9UK58 526 aaPredicted RBP17.12■□□□□ 0.33
PKD1-212ENST00000475889 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
PKD1-212ENST00000475889 SIK1P57059 783 aa17.11■□□□□ 0.33
PKD1-212ENST00000475889 SLC27A3Q5K4L6 730 aa17.11■□□□□ 0.33
PKD1-212ENST00000475889 SLC4A9Q96Q91 983 aa17.11■□□□□ 0.33
PKD1-212ENST00000475889 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
PKD1-212ENST00000475889 KCNQ3O43525 872 aa17.1■□□□□ 0.33
PKD1-212ENST00000475889 PTCD1O75127 700 aaKnown RBP17.1■□□□□ 0.33
PKD1-212ENST00000475889 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
PKD1-212ENST00000475889 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
PKD1-212ENST00000475889 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
PKD1-212ENST00000475889 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
PKD1-212ENST00000475889 ANO8Q9HCE9 1232 aaPredicted RBP17.09■□□□□ 0.33
PKD1-212ENST00000475889 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
PKD1-212ENST00000475889 UBR2Q8IWV8 1755 aa17.08■□□□□ 0.33
PKD1-212ENST00000475889 ITPK1Q13572 414 aa17.08■□□□□ 0.32
PKD1-212ENST00000475889 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
PKD1-212ENST00000475889 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
PKD1-212ENST00000475889 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
PKD1-212ENST00000475889 LINC00116Q8NCU8 138 aa17.06■□□□□ 0.32
PKD1-212ENST00000475889 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
PKD1-212ENST00000475889 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
PKD1-212ENST00000475889 C5P01031 1676 aa17.06■□□□□ 0.32
PKD1-212ENST00000475889 ZNF831Q5JPB2 1677 aa17.06■□□□□ 0.32
PKD1-212ENST00000475889 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
PKD1-212ENST00000475889 TJP1Q07157 1748 aa17.05■□□□□ 0.32
PKD1-212ENST00000475889 CCDC27Q2M243 656 aa17.05■□□□□ 0.32
PKD1-212ENST00000475889 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
PKD1-212ENST00000475889 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
PKD1-212ENST00000475889 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
PKD1-212ENST00000475889 WWC1Q8IX03 1113 aa17.04■□□□□ 0.32
PKD1-212ENST00000475889 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
PKD1-212ENST00000475889 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
PKD1-212ENST00000475889 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
PKD1-212ENST00000475889 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
PKD1-212ENST00000475889 R3HDM1Q15032 1099 aaKnown RBP17.03■□□□□ 0.32
PKD1-212ENST00000475889 SLC15A2Q16348 729 aa17.03■□□□□ 0.32
PKD1-212ENST00000475889 DNAJC10Q8IXB1 793 aa17.03■□□□□ 0.32
PKD1-212ENST00000475889 FMNL2Q96PY5 1086 aa17.03■□□□□ 0.32
PKD1-212ENST00000475889 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
PKD1-212ENST00000475889 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
PKD1-212ENST00000475889 LAS1LQ9Y4W2 734 aaKnown RBP17.03■□□□□ 0.32
PKD1-212ENST00000475889 C4BP0C0L5 1744 aa17.03■□□□□ 0.32
PKD1-212ENST00000475889 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.32
PKD1-212ENST00000475889 CHL1O00533 1208 aa17.02■□□□□ 0.32
PKD1-212ENST00000475889 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
PKD1-212ENST00000475889 ZNF853P0CG23 659 aa17.01■□□□□ 0.31
PKD1-212ENST00000475889 EIF4A1P60842 406 aaKnown RBP17.01■□□□□ 0.31
PKD1-212ENST00000475889 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
PKD1-212ENST00000475889 PRAMEF22A3QJZ6 481 aa17■□□□□ 0.31
PKD1-212ENST00000475889 CALD1Q05682 793 aaKnown RBP17■□□□□ 0.31
PKD1-212ENST00000475889 CFAP44Q96MT7 982 aa17■□□□□ 0.31
PKD1-212ENST00000475889 CYP19A1P11511 503 aaPredicted RBP16.99■□□□□ 0.31
PKD1-212ENST00000475889 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
PKD1-212ENST00000475889 AMIGO3Q86WK7 504 aa16.99■□□□□ 0.31
PKD1-212ENST00000475889 IFT57Q9NWB7 429 aa16.99■□□□□ 0.31
PKD1-212ENST00000475889 CNTNAP4Q9C0A0 1308 aa16.98■□□□□ 0.31
PKD1-212ENST00000475889 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
PKD1-212ENST00000475889 CRKLP46109 303 aaKnown RBP16.98■□□□□ 0.31
PKD1-212ENST00000475889 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
PKD1-212ENST00000475889 AK7Q96M32 723 aa16.98■□□□□ 0.31
PKD1-212ENST00000475889 PDGFDQ9GZP0 370 aaPredicted RBP16.98■□□□□ 0.31
PKD1-212ENST00000475889 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
PKD1-212ENST00000475889 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
PKD1-212ENST00000475889 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
PKD1-212ENST00000475889 HMGB2P26583 209 aaKnown RBP16.97■□□□□ 0.31
PKD1-212ENST00000475889 GNAI1P63096 354 aa16.97■□□□□ 0.31
PKD1-212ENST00000475889 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
PKD1-212ENST00000475889 INTS5Q6P9B9 1019 aaKnown RBP16.97■□□□□ 0.31
PKD1-212ENST00000475889 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
PKD1-212ENST00000475889 USP16Q9Y5T5 823 aa16.97■□□□□ 0.31
PKD1-212ENST00000475889 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
PKD1-212ENST00000475889 ZNF521Q96K83 1311 aa16.96■□□□□ 0.31
PKD1-212ENST00000475889 GNPATO15228 680 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms