RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 MINK1Q8N4C8 1332 aaPredicted RBP21.51■■□□□ 1.03
CCM2-207ENST00000475551 YTHDC2Q9H6S0 1430 aaKnown RBP21.51■■□□□ 1.03
CCM2-207ENST00000475551 SPTLC3Q9NUV7 552 aa21.5■■□□□ 1.03
CCM2-207ENST00000475551 IL13P35225 146 aa21.5■■□□□ 1.03
CCM2-207ENST00000475551 HSPA2P54652 639 aa21.49■■□□□ 1.03
CCM2-207ENST00000475551 ANAPC15P60006 121 aa21.49■■□□□ 1.03
CCM2-207ENST00000475551 PODXL2Q9NZ53 605 aa21.49■■□□□ 1.03
CCM2-207ENST00000475551 HAP1P54257 671 aaPredicted RBP21.49■■□□□ 1.03
CCM2-207ENST00000475551 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
CCM2-207ENST00000475551 LMTK3Q96Q04 1460 aa21.48■■□□□ 1.03
CCM2-207ENST00000475551 MCCP23508 829 aa21.48■■□□□ 1.03
CCM2-207ENST00000475551 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
CCM2-207ENST00000475551 IL17RAQ96F46 866 aa21.48■■□□□ 1.03
CCM2-207ENST00000475551 CABP1Q9NZU7 370 aa21.48■■□□□ 1.03
CCM2-207ENST00000475551 PDE1AP54750 535 aa21.47■■□□□ 1.03
CCM2-207ENST00000475551 GTPBP4Q9BZE4 634 aaKnown RBP21.47■■□□□ 1.03
CCM2-207ENST00000475551 GADD45BO75293 160 aaPredicted RBP21.47■■□□□ 1.03
CCM2-207ENST00000475551 TMEM87AQ8NBN3 555 aa21.47■■□□□ 1.03
CCM2-207ENST00000475551 KIF3AQ9Y496 699 aa21.47■■□□□ 1.03
CCM2-207ENST00000475551 MSH6P52701 1360 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 FBLN1P23142 703 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 USP48Q86UV5 1035 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 ANKLE2Q86XL3 938 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 APBB1O00213 710 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 HMMRO75330 724 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 LETM1O95202 739 aaPredicted RBP21.46■■□□□ 1.03
CCM2-207ENST00000475551 ZNF830Q96NB3 372 aaPredicted RBP21.46■■□□□ 1.03
CCM2-207ENST00000475551 ESYT1Q9BSJ8 1104 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 CDK19Q9BWU1 502 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 USP25Q9UHP3 1055 aa21.46■■□□□ 1.03
CCM2-207ENST00000475551 ZHX1Q9UKY1 873 aaPredicted RBP21.46■■□□□ 1.03
CCM2-207ENST00000475551 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.03
CCM2-207ENST00000475551 PTPRCP08575 1304 aa21.45■■□□□ 1.03
CCM2-207ENST00000475551 ADCY5O95622 1261 aa21.45■■□□□ 1.02
CCM2-207ENST00000475551 CCDC183Q5T5S1 534 aa21.45■■□□□ 1.02
CCM2-207ENST00000475551 KLHL34Q8N239 644 aa21.45■■□□□ 1.02
CCM2-207ENST00000475551 JARID2Q92833 1246 aaPredicted RBP21.45■■□□□ 1.02
CCM2-207ENST00000475551 WDR33Q9C0J8 1336 aaKnown RBP21.45■■□□□ 1.02
CCM2-207ENST00000475551 PLEKHG1Q9ULL1 1385 aa21.44■■□□□ 1.02
CCM2-207ENST00000475551 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
CCM2-207ENST00000475551 NRXN3Q9Y4C0 1643 aa21.44■■□□□ 1.02
CCM2-207ENST00000475551 CDK12Q9NYV4 1490 aaPredicted RBP21.44■■□□□ 1.02
CCM2-207ENST00000475551 MEIS3Q99687 375 aa21.44■■□□□ 1.02
CCM2-207ENST00000475551 TTC12Q9H892 705 aaPredicted RBP21.44■■□□□ 1.02
CCM2-207ENST00000475551 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
CCM2-207ENST00000475551 ALKQ9UM73 1620 aa21.43■■□□□ 1.02
CCM2-207ENST00000475551 TSC1Q92574 1164 aa21.43■■□□□ 1.02
CCM2-207ENST00000475551 SSH2Q76I76 1423 aa21.43■■□□□ 1.02
CCM2-207ENST00000475551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCM2-207ENST00000475551 ATP7BP35670 1465 aa21.42■■□□□ 1.02
CCM2-207ENST00000475551 FAM83GA6ND36 823 aa21.42■■□□□ 1.02
CCM2-207ENST00000475551 PALD1Q9ULE6 856 aa21.42■■□□□ 1.02
CCM2-207ENST00000475551 MX1P20591 662 aa21.41■■□□□ 1.02
CCM2-207ENST00000475551 GDPD2Q9HCC8 539 aa21.41■■□□□ 1.02
CCM2-207ENST00000475551 EMILIN1Q9Y6C2 1016 aa21.41■■□□□ 1.02
CCM2-207ENST00000475551 PPP4R3BQ5MIZ7 849 aa21.41■■□□□ 1.02
CCM2-207ENST00000475551 SLC26A8Q96RN1 970 aa21.41■■□□□ 1.02
CCM2-207ENST00000475551 SALL3Q9BXA9 1300 aa21.4■■□□□ 1.02
CCM2-207ENST00000475551 KIF20AO95235 890 aa21.4■■□□□ 1.02
CCM2-207ENST00000475551 KIAA0232Q92628 1395 aa21.4■■□□□ 1.02
CCM2-207ENST00000475551 KDM4AO75164 1064 aa21.4■■□□□ 1.02
CCM2-207ENST00000475551 CBX1P83916 185 aa21.4■■□□□ 1.02
CCM2-207ENST00000475551 BCL2L12Q9HB09 334 aa21.4■■□□□ 1.02
CCM2-207ENST00000475551 ADAMTS13Q76LX8 1427 aa21.4■■□□□ 1.02
CCM2-207ENST00000475551 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.02
CCM2-207ENST00000475551 MPNDQ8N594 471 aa21.39■■□□□ 1.02
CCM2-207ENST00000475551 AATKQ6ZMQ8 1374 aa21.39■■□□□ 1.01
CCM2-207ENST00000475551 RPAP1Q9BWH6 1393 aaPredicted RBP21.39■■□□□ 1.01
CCM2-207ENST00000475551 PLEKHG5O94827 1062 aa21.39■■□□□ 1.01
CCM2-207ENST00000475551 KRT24Q2M2I5 525 aa21.39■■□□□ 1.01
CCM2-207ENST00000475551 EPB41L2O43491 1005 aaKnown RBP21.38■■□□□ 1.01
CCM2-207ENST00000475551 DCTN1Q14203 1278 aa21.38■■□□□ 1.01
CCM2-207ENST00000475551 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
CCM2-207ENST00000475551 SETD1AO15047 1707 aaKnown RBP21.38■■□□□ 1.01
CCM2-207ENST00000475551 HCLS1P14317 486 aaPredicted RBP21.38■■□□□ 1.01
CCM2-207ENST00000475551 C17orf53Q8N3J3 647 aaPredicted RBP21.38■■□□□ 1.01
CCM2-207ENST00000475551 DIAPH3Q9NSV4 1193 aa21.38■■□□□ 1.01
CCM2-207ENST00000475551 TUBGCP6Q96RT7 1819 aa21.37■■□□□ 1.01
CCM2-207ENST00000475551 TPM3P06753 285 aa21.37■■□□□ 1.01
CCM2-207ENST00000475551 CHMLP26374 656 aa21.37■■□□□ 1.01
CCM2-207ENST00000475551 NOL8Q76FK4 1167 aaKnown RBP21.37■■□□□ 1.01
CCM2-207ENST00000475551 SRCIN1Q9C0H9 1055 aa21.37■■□□□ 1.01
CCM2-207ENST00000475551 METP08581 1390 aa21.37■■□□□ 1.01
CCM2-207ENST00000475551 CHL1O00533 1208 aa21.36■■□□□ 1.01
CCM2-207ENST00000475551 UBE2HP62256 183 aa21.36■■□□□ 1.01
CCM2-207ENST00000475551 FOXD4L6Q3SYB3 417 aaPredicted RBP21.36■■□□□ 1.01
CCM2-207ENST00000475551 FOXD4L3Q6VB84 417 aaPredicted RBP21.36■■□□□ 1.01
CCM2-207ENST00000475551 KIAA1524Q8TCG1 905 aa21.36■■□□□ 1.01
CCM2-207ENST00000475551 ANO2Q9NQ90 1003 aa21.36■■□□□ 1.01
CCM2-207ENST00000475551 PDCL2Q8N4E4 241 aa21.35■■□□□ 1.01
CCM2-207ENST00000475551 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
CCM2-207ENST00000475551 ANKRD7Q92527 254 aa21.35■■□□□ 1.01
CCM2-207ENST00000475551 FUCA2Q9BTY2 467 aa21.35■■□□□ 1.01
CCM2-207ENST00000475551 CHAF1AQ13111 956 aaPredicted RBP21.34■■□□□ 1.01
CCM2-207ENST00000475551 EDC4Q6P2E9 1401 aaKnown RBP21.33■■□□□ 1.01
CCM2-207ENST00000475551 UPF3BQ9BZI7 483 aaKnown RBP21.33■■□□□ 1
CCM2-207ENST00000475551 CNPY2Q9Y2B0 182 aa21.33■■□□□ 1
CCM2-207ENST00000475551 FAM177BA6PVY3 158 aa21.32■■□□□ 1
CCM2-207ENST00000475551 CTIFO43310 598 aaKnown RBP21.32■■□□□ 1
CCM2-207ENST00000475551 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms