RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, human

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZIC4-208	ENST00000472749	CHAF1A	Q13111	956 aa	Predicted RBP	11.76	□□□□□ -0.53
ZIC4-208	ENST00000472749	PRIMPOL	Q96LW4	560 aa		11.76	□□□□□ -0.53
ZIC4-208	ENST00000472749	TTC12	Q9H892	705 aa	Predicted RBP	11.76	□□□□□ -0.53
ZIC4-208	ENST00000472749	ABCC3	O15438	1527 aa		11.76	□□□□□ -0.53
ZIC4-208	ENST00000472749	BAG4	O95429	457 aa	Known RBP	11.76	□□□□□ -0.53
ZIC4-208	ENST00000472749	NEK4	P51957	841 aa		11.76	□□□□□ -0.53
ZIC4-208	ENST00000472749	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
ZIC4-208	ENST00000472749	CNPY4	Q8N129	248 aa		11.75	□□□□□ -0.53
ZIC4-208	ENST00000472749	DDX54	Q8TDD1	881 aa	Known RBP	11.75	□□□□□ -0.53
ZIC4-208	ENST00000472749	ZMYM3	Q14202	1370 aa		11.75	□□□□□ -0.53
ZIC4-208	ENST00000472749	PPIP5K1	Q6PFW1	1433 aa		11.75	□□□□□ -0.53
ZIC4-208	ENST00000472749	ANXA1	P04083	346 aa		11.75	□□□□□ -0.53
ZIC4-208	ENST00000472749	MYO3A	Q8NEV4	1616 aa		11.75	□□□□□ -0.53
ZIC4-208	ENST00000472749		K7ELQ4	463 aa	Predicted RBP	11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	HMMR	O75330	724 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	GAS2L2	Q8NHY3	880 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	IFT172	Q9UG01	1749 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	PDLIM2	Q96JY6	352 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	CFAP44	Q96MT7	982 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	UPF3B	Q9BZI7	483 aa	Known RBP	11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	LMTK2	Q8IWU2	1503 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	PPL	O60437	1756 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	G2E3	Q7L622	706 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	IFT57	Q9NWB7	429 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	NEURL4	Q96JN8	1562 aa		11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	VIRMA	Q69YN4	1812 aa	Known RBP	11.74	□□□□□ -0.53
ZIC4-208	ENST00000472749	ST18	O60284	1047 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	EIF4A2	Q14240	407 aa	Known RBP	11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	EID1	Q9Y6B2	187 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	MLH3	Q9UHC1	1453 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	PATL2	C9JE40	543 aa	Known RBP	11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	KIF2C	Q99661	725 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	CHMP3	Q9Y3E7	222 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	ACE	P12821	1306 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	CAPN2	P17655	700 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	INTS3	Q68E01	1043 aa	Known RBP	11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	ABTB2	Q8N961	1025 aa		11.73	□□□□□ -0.53
ZIC4-208	ENST00000472749	NUTM1	Q86Y26	1132 aa		11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	SNX21	Q969T3	373 aa		11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	IL13	P35225	146 aa		11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	AIMP1	Q12904	312 aa	Known RBP	11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	CAMSAP1	Q5T5Y3	1602 aa		11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	FRMPD1	Q5SYB0	1578 aa		11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	LOC102724159	A0A0B4J2E5	919 aa		11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	CHRM1	P11229	460 aa	Predicted RBP	11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749	PWP2	Q15269	919 aa	Known RBP	11.72	□□□□□ -0.53
ZIC4-208	ENST00000472749		A0A0G2JS52	829 aa		11.71	□□□□□ -0.53
ZIC4-208	ENST00000472749	RIOK3	O14730	519 aa	Known RBP	11.71	□□□□□ -0.53
ZIC4-208	ENST00000472749	ZNF445	P59923	1031 aa		11.71	□□□□□ -0.53
ZIC4-208	ENST00000472749	OGFR	Q9NZT2	677 aa		11.71	□□□□□ -0.53
ZIC4-208	ENST00000472749	KCNG1	Q9UIX4	513 aa		11.71	□□□□□ -0.53
ZIC4-208	ENST00000472749	GSPT1	P15170	499 aa	Known RBP	11.71	□□□□□ -0.54
ZIC4-208	ENST00000472749	SURF6	O75683	361 aa	Known RBP	11.71	□□□□□ -0.54
ZIC4-208	ENST00000472749	SDS	P20132	328 aa		11.71	□□□□□ -0.54
ZIC4-208	ENST00000472749	PLEKHM2	Q8IWE5	1019 aa		11.71	□□□□□ -0.54
ZIC4-208	ENST00000472749	ARHGAP45	Q92619	1136 aa		11.71	□□□□□ -0.54
ZIC4-208	ENST00000472749	NEXMIF	Q5QGS0	1516 aa		11.7	□□□□□ -0.54
ZIC4-208	ENST00000472749	ZGPAT	Q8N5A5	531 aa	Known RBP	11.7	□□□□□ -0.54
ZIC4-208	ENST00000472749	GDPD2	Q9HCC8	539 aa		11.7	□□□□□ -0.54
ZIC4-208	ENST00000472749	EP400NL	Q6ZTU2	488 aa		11.7	□□□□□ -0.54
ZIC4-208	ENST00000472749	PNPLA6	Q8IY17	1366 aa		11.7	□□□□□ -0.54
ZIC4-208	ENST00000472749	CALCOCO1	Q9P1Z2	691 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	COL3A1	P02461	1466 aa	Predicted RBP	11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	SLFN14	P0C7P3	912 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	PKP1	Q13835	747 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	CD163L1	Q9NR16	1453 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	REC8	O95072	547 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	PRR29	P0C7W0	189 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	MCC	P23508	829 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	RNF216	Q9NWF9	866 aa	Predicted RBP	11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	HECW2	Q9P2P5	1572 aa		11.69	□□□□□ -0.54
ZIC4-208	ENST00000472749	ADGRB2	O60241	1585 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	PTPRM	P28827	1452 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	FEZ1	Q99689	392 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	TOMM22	Q9NS69	142 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	ZC3H13	Q5T200	1668 aa	Known RBP	11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	MTHFSD	Q2M296	383 aa	Known RBP	11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	LRRC7	Q96NW7	1537 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	DIAPH3	Q9NSV4	1193 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	USP25	Q9UHP3	1055 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	ABCC4	O15439	1325 aa		11.68	□□□□□ -0.54
ZIC4-208	ENST00000472749	GABPB1	Q06547	395 aa	Predicted RBP	11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	HDGFL1	Q5TGJ6	251 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	PIBF1	Q8WXW3	757 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	RSPH14	Q9UHP6	348 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	AMOTL2	Q9Y2J4	779 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	LRRFIP2	Q9Y608	721 aa	Known RBP	11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	FAM135B	Q49AJ0	1406 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	GNAI2	P04899	355 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	UBTFL1	P0CB47	393 aa	Predicted RBP	11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	NAA30	Q147X3	362 aa	Predicted RBP	11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	GPATCH11	Q8N954	259 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	DCTPP1	Q9H773	170 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	SIGLEC1	Q9BZZ2	1709 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	ZNF853	P0CG23	659 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	DDIT3	P35638	169 aa		11.67	□□□□□ -0.54
ZIC4-208	ENST00000472749	TEF	Q10587	303 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms