RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 IMMTQ16891 758 aaKnown RBP10.11□□□□□ -0.79
CD47-204ENST00000471694 CCDC152Q4G0S7 254 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 SMARCE1Q969G3 411 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 EXOSC9Q06265 439 aaKnown RBP10.11□□□□□ -0.79
CD47-204ENST00000471694 PICALMQ13492 652 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 ANKRD18AQ8IVF6 992 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 FGD6Q6ZV73 1430 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 PIP4K2AP48426 406 aaPredicted RBP10.11□□□□□ -0.79
CD47-204ENST00000471694 SETQ01105 290 aaPredicted RBP10.11□□□□□ -0.79
CD47-204ENST00000471694 SEPT7Q16181 437 aaKnown RBP10.1□□□□□ -0.79
CD47-204ENST00000471694 TCP11L2Q8N4U5 519 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 B4DLN1 442 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 CDC45O75419 566 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 MRPL12P52815 198 aaKnown RBP10.1□□□□□ -0.79
CD47-204ENST00000471694 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 NAPBQ9H115 298 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 DEF6Q9H4E7 631 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 ANKRD30BQ9BXX2 1392 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 ANAPC15P60006 121 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 ARHGAP27Q6ZUM4 889 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 ZNF354CQ86Y25 554 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
CD47-204ENST00000471694 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 TOPBP1Q92547 1522 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 ZRSR2Q15696 482 aaKnown RBP10.1□□□□□ -0.79
CD47-204ENST00000471694 NLRP3Q96P20 1036 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 COMMD10Q9Y6G5 202 aa10.1□□□□□ -0.79
CD47-204ENST00000471694 PABPN1LA6NDY0 278 aaKnown RBP10.09□□□□□ -0.79
CD47-204ENST00000471694 VAT1LQ9HCJ6 419 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
CD47-204ENST00000471694 KIF21BO75037 1637 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 DPY19L2Q6NUT2 758 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 ZNF804AQ7Z570 1209 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 RBM17Q96I25 401 aaKnown RBP10.09□□□□□ -0.79
CD47-204ENST00000471694 EYA3Q99504 573 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 CABLES1Q8TDN4 633 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 PANK1Q8TE04 598 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 ZNHIT6Q9NWK9 470 aaKnown RBP10.09□□□□□ -0.79
CD47-204ENST00000471694 FAM13BQ9NYF5 915 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 BAG4O95429 457 aaKnown RBP10.09□□□□□ -0.79
CD47-204ENST00000471694 JMYQ8N9B5 988 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 WASF1Q92558 559 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 ZC3H12CQ9C0D7 883 aaKnown RBP10.09□□□□□ -0.79
CD47-204ENST00000471694 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
CD47-204ENST00000471694 GNPATO15228 680 aa10.08□□□□□ -0.8
CD47-204ENST00000471694 NCBP1Q09161 790 aaKnown RBP10.08□□□□□ -0.8
CD47-204ENST00000471694 NFE2L2Q16236 605 aa10.08□□□□□ -0.8
CD47-204ENST00000471694 NIP7Q9Y221 180 aaKnown RBP eCLIP10.08□□□□□ -0.8
CD47-204ENST00000471694 BCS1LQ9Y276 419 aa10.08□□□□□ -0.8
CD47-204ENST00000471694 SPOUT1Q5T280 376 aaKnown RBP10.08□□□□□ -0.8
CD47-204ENST00000471694 TSR2Q969E8 191 aaKnown RBP10.08□□□□□ -0.8
CD47-204ENST00000471694 PICK1Q9NRD5 415 aa10.08□□□□□ -0.8
CD47-204ENST00000471694 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
CD47-204ENST00000471694 MCM10Q7L590 875 aa10.08□□□□□ -0.8
CD47-204ENST00000471694 BICD1Q96G01 975 aa10.08□□□□□ -0.8
CD47-204ENST00000471694 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 MRPS9P82933 396 aaKnown RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 PRKG1Q13976 671 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 BTG4Q9NY30 223 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 DHX8Q14562 1220 aaKnown RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 UTP14AQ9BVJ6 771 aaKnown RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 KINO60870 393 aaKnown RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 FCHSD2O94868 740 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 IQCA1Q86XH1 822 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 GPHNQ9NQX3 736 aaPredicted RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 BCAR3O75815 825 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 CTCFLQ8NI51 663 aaPredicted RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 TMOD4Q9NZQ9 345 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 CCNL1Q9UK58 526 aaPredicted RBP10.07□□□□□ -0.8
CD47-204ENST00000471694 SMC2O95347 1197 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 RXRBP28702 533 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
CD47-204ENST00000471694 H0YIN7 160 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 LUC7LQ9NQ29 371 aaKnown RBP10.06□□□□□ -0.8
CD47-204ENST00000471694 CWC25Q9NXE8 425 aaPredicted RBP10.06□□□□□ -0.8
CD47-204ENST00000471694 UHRF1BP1Q6BDS2 1440 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 CEP57L1Q8IYX8 460 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 HFM1A2PYH4 1435 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 NME9Q86XW9 330 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 WASLO00401 505 aaPredicted RBP10.06□□□□□ -0.8
CD47-204ENST00000471694 TMEM266Q2M3C6 531 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 CASKIN1Q8WXD9 1431 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 ERLIN2O94905 339 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 ANKRD1Q15327 319 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 TPTE2Q6XPS3 522 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 TROQ12816 1431 aaPredicted RBP10.06□□□□□ -0.8
CD47-204ENST00000471694 KIF14Q15058 1648 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 NLRP5P59047 1200 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 EXOC6Q8TAG9 804 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 HYPKQ9NX55 129 aa10.06□□□□□ -0.8
CD47-204ENST00000471694 IL2RBP14784 551 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 ARHGEF11O15085 1522 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 PLB1Q6P1J6 1458 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 ZGPATQ8N5A5 531 aaKnown RBP10.05□□□□□ -0.8
CD47-204ENST00000471694 LDHAL6AQ6ZMR3 332 aa10.05□□□□□ -0.8
CD47-204ENST00000471694 SIRT1Q96EB6 747 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms