RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.04
PCCB-210ENST00000471595 CCDC43Q96MW1 224 aaKnown RBP15.27■□□□□ 0.04
PCCB-210ENST00000471595 PPFIBP1Q86W92 1011 aa15.27■□□□□ 0.03
PCCB-210ENST00000471595 WASF1Q92558 559 aa15.27■□□□□ 0.03
PCCB-210ENST00000471595 LIMCH1Q9UPQ0 1083 aa15.27■□□□□ 0.03
PCCB-210ENST00000471595 PIK3C2GO75747 1445 aa15.27■□□□□ 0.03
PCCB-210ENST00000471595 TTC22Q5TAA0 569 aa15.27■□□□□ 0.03
PCCB-210ENST00000471595 MBIPQ9NS73 344 aa15.27■□□□□ 0.03
PCCB-210ENST00000471595 NOL7Q9UMY1 257 aaKnown RBP15.26■□□□□ 0.03
PCCB-210ENST00000471595 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
PCCB-210ENST00000471595 DNAAF4Q8WXU2 420 aa15.26■□□□□ 0.03
PCCB-210ENST00000471595 ANO8Q9HCE9 1232 aaPredicted RBP15.26■□□□□ 0.03
PCCB-210ENST00000471595 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
PCCB-210ENST00000471595 DENND4BO75064 1496 aaPredicted RBP15.26■□□□□ 0.03
PCCB-210ENST00000471595 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
PCCB-210ENST00000471595 WDR62O43379 1518 aa15.26■□□□□ 0.03
PCCB-210ENST00000471595 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
PCCB-210ENST00000471595 PUS7Q96PZ0 661 aaKnown RBP15.25■□□□□ 0.03
PCCB-210ENST00000471595 HMGB1P09429 215 aaKnown RBP15.25■□□□□ 0.03
PCCB-210ENST00000471595 FLIIQ13045 1269 aa15.25■□□□□ 0.03
PCCB-210ENST00000471595 ZNHIT6Q9NWK9 470 aaKnown RBP15.25■□□□□ 0.03
PCCB-210ENST00000471595 F6X3S4 739 aa15.25■□□□□ 0.03
PCCB-210ENST00000471595 STIM1Q13586 685 aa15.25■□□□□ 0.03
PCCB-210ENST00000471595 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
PCCB-210ENST00000471595 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
PCCB-210ENST00000471595 BCL11BQ9C0K0 894 aaPredicted RBP15.25■□□□□ 0.03
PCCB-210ENST00000471595 MPHOSPH8Q99549 860 aa15.24■□□□□ 0.03
PCCB-210ENST00000471595 AKAP2Q9Y2D5 859 aa15.24■□□□□ 0.03
PCCB-210ENST00000471595 FAM177BA6PVY3 158 aa15.24■□□□□ 0.03
PCCB-210ENST00000471595 SYCP2Q9BX26 1530 aa15.24■□□□□ 0.03
PCCB-210ENST00000471595 TTLL5Q6EMB2 1281 aa15.23■□□□□ 0.03
PCCB-210ENST00000471595 MPNDQ8N594 471 aa15.23■□□□□ 0.03
PCCB-210ENST00000471595 HYPKQ9NX55 129 aa15.23■□□□□ 0.03
PCCB-210ENST00000471595 DBF4Q9UBU7 674 aaPredicted RBP15.23■□□□□ 0.03
PCCB-210ENST00000471595 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
PCCB-210ENST00000471595 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
PCCB-210ENST00000471595 PCDHB15Q9Y5E8 787 aa15.23■□□□□ 0.03
PCCB-210ENST00000471595 KLHL40Q2TBA0 621 aa15.23■□□□□ 0.03
PCCB-210ENST00000471595 KIAA0556O60303 1618 aa15.23■□□□□ 0.03
PCCB-210ENST00000471595 BAG4O95429 457 aaKnown RBP15.23■□□□□ 0.03
PCCB-210ENST00000471595 C8orf34Q49A92 452 aa15.23■□□□□ 0.03
PCCB-210ENST00000471595 DDX54Q8TDD1 881 aaKnown RBP15.23■□□□□ 0.03
PCCB-210ENST00000471595 TESK2Q96S53 571 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 MCM5P33992 734 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 EVI5LQ96CN4 794 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 MYO6Q9UM54 1294 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 PIK3R4Q99570 1358 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 TXLNBQ8N3L3 684 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 DDX11Q96FC9 970 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 MTMR7Q9Y216 660 aa15.22■□□□□ 0.03
PCCB-210ENST00000471595 CTAGE5O15320 804 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 UBAC1Q9BSL1 405 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 ANO10Q9NW15 660 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 SNX21Q969T3 373 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 CEP131Q9UPN4 1083 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 FERMT3Q86UX7 667 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 CCAR1Q8IX12 1150 aaKnown RBP15.21■□□□□ 0.03
PCCB-210ENST00000471595 PDCL2Q8N4E4 241 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 NUP133Q8WUM0 1156 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 PRDM11Q9NQV5 511 aa15.21■□□□□ 0.03
PCCB-210ENST00000471595 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.02
PCCB-210ENST00000471595 TDO2P48775 406 aa15.21■□□□□ 0.02
PCCB-210ENST00000471595 ECHDC1Q9NTX5 307 aa15.21■□□□□ 0.02
PCCB-210ENST00000471595 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
PCCB-210ENST00000471595 FILIP1Q7Z7B0 1213 aa15.2■□□□□ 0.02
PCCB-210ENST00000471595 LUC7LQ9NQ29 371 aaKnown RBP15.2■□□□□ 0.02
PCCB-210ENST00000471595 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
PCCB-210ENST00000471595 ERLIN1O75477 346 aa15.2■□□□□ 0.02
PCCB-210ENST00000471595 CT47A1Q5JQC4 288 aaPredicted RBP15.2■□□□□ 0.02
PCCB-210ENST00000471595 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
PCCB-210ENST00000471595 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
PCCB-210ENST00000471595 CAMK4Q16566 473 aa15.19■□□□□ 0.02
PCCB-210ENST00000471595 MYD88Q99836 296 aa15.19■□□□□ 0.02
PCCB-210ENST00000471595 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
PCCB-210ENST00000471595 UVSSAQ2YD98 709 aa15.19■□□□□ 0.02
PCCB-210ENST00000471595 STARD3NLO95772 234 aa15.18■□□□□ 0.02
PCCB-210ENST00000471595 AIDAQ96BJ3 306 aa15.18■□□□□ 0.02
PCCB-210ENST00000471595 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
PCCB-210ENST00000471595 AMOTL2Q9Y2J4 779 aa15.18■□□□□ 0.02
PCCB-210ENST00000471595 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
PCCB-210ENST00000471595 LEKR1Q6ZMV7 388 aa15.18■□□□□ 0.02
PCCB-210ENST00000471595 COL17A1Q9UMD9 1497 aaPredicted RBP15.18■□□□□ 0.02
PCCB-210ENST00000471595 STX6O43752 255 aa15.18■□□□□ 0.02
PCCB-210ENST00000471595 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
PCCB-210ENST00000471595 IFIT1P09914 478 aaKnown RBP15.18■□□□□ 0.02
PCCB-210ENST00000471595 ANKRD44Q8N8A2 993 aa15.17■□□□□ 0.02
PCCB-210ENST00000471595 PZPP20742 1482 aa15.17■□□□□ 0.02
PCCB-210ENST00000471595 IDH1O75874 414 aaKnown RBP15.17■□□□□ 0.02
PCCB-210ENST00000471595 ZC3H6P61129 1189 aaKnown RBP15.17■□□□□ 0.02
PCCB-210ENST00000471595 EIF3JO75822 258 aaKnown RBP15.17■□□□□ 0.02
PCCB-210ENST00000471595 ANAPC15P60006 121 aa15.17■□□□□ 0.02
PCCB-210ENST00000471595 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
PCCB-210ENST00000471595 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
PCCB-210ENST00000471595 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
PCCB-210ENST00000471595 INSRP06213 1382 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 IKQ13123 557 aaPredicted RBP15.16■□□□□ 0.02
PCCB-210ENST00000471595 CCDC8Q9H0W5 538 aaPredicted RBP15.16■□□□□ 0.02
PCCB-210ENST00000471595 A2MP01023 1474 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 FAM83GA6ND36 823 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms