RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 PRKAR2BP31323 418 aa20.39■□□□□ 0.85
C19orf54-202ENST00000469741 CENPQQ7L2Z9 268 aaPredicted RBP20.39■□□□□ 0.85
C19orf54-202ENST00000469741 CAMKK2Q96RR4 588 aa20.39■□□□□ 0.85
C19orf54-202ENST00000469741 DOT1LQ8TEK3 1739 aa20.38■□□□□ 0.85
C19orf54-202ENST00000469741 MS4A1P11836 297 aa20.38■□□□□ 0.85
C19orf54-202ENST00000469741 PHACTR3Q96KR7 559 aa20.38■□□□□ 0.85
C19orf54-202ENST00000469741 BCL9O00512 1426 aa20.37■□□□□ 0.85
C19orf54-202ENST00000469741 KCNQ4P56696 695 aa20.37■□□□□ 0.85
C19orf54-202ENST00000469741 CCDC125Q86Z20 511 aa20.37■□□□□ 0.85
C19orf54-202ENST00000469741 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
C19orf54-202ENST00000469741 BCL11BQ9C0K0 894 aaPredicted RBP20.37■□□□□ 0.85
C19orf54-202ENST00000469741 PHKG2P15735 406 aa20.36■□□□□ 0.85
C19orf54-202ENST00000469741 AAMPQ13685 434 aa20.36■□□□□ 0.85
C19orf54-202ENST00000469741 SF3B2Q13435 895 aaKnown RBP20.36■□□□□ 0.85
C19orf54-202ENST00000469741 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
C19orf54-202ENST00000469741 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
C19orf54-202ENST00000469741 BTAF1O14981 1849 aa20.35■□□□□ 0.85
C19orf54-202ENST00000469741 CANXP27824 592 aaKnown RBP20.35■□□□□ 0.85
C19orf54-202ENST00000469741 NFE2L2Q16236 605 aa20.35■□□□□ 0.85
C19orf54-202ENST00000469741 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
C19orf54-202ENST00000469741 NHSQ6T4R5 1651 aa20.35■□□□□ 0.85
C19orf54-202ENST00000469741 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
C19orf54-202ENST00000469741 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
C19orf54-202ENST00000469741 ITGB4P16144 1822 aa20.33■□□□□ 0.85
C19orf54-202ENST00000469741 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.84
C19orf54-202ENST00000469741 BAG6P46379 1132 aa20.32■□□□□ 0.84
C19orf54-202ENST00000469741 CALD1Q05682 793 aaKnown RBP20.32■□□□□ 0.84
C19orf54-202ENST00000469741 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
C19orf54-202ENST00000469741 LGR6Q9HBX8 967 aa20.32■□□□□ 0.84
C19orf54-202ENST00000469741 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
C19orf54-202ENST00000469741 TSR2Q969E8 191 aaKnown RBP20.31■□□□□ 0.84
C19orf54-202ENST00000469741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.31■□□□□ 0.84
C19orf54-202ENST00000469741 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
C19orf54-202ENST00000469741 PLEKHO1Q53GL0 409 aaPredicted RBP20.31■□□□□ 0.84
C19orf54-202ENST00000469741 IFNL2Q8IZJ0 200 aa20.31■□□□□ 0.84
C19orf54-202ENST00000469741 FRAT1Q92837 279 aaPredicted RBP20.31■□□□□ 0.84
C19orf54-202ENST00000469741 PIGBQ92521 554 aa20.3■□□□□ 0.84
C19orf54-202ENST00000469741 PANK1Q8TE04 598 aa20.29■□□□□ 0.84
C19orf54-202ENST00000469741 LRRC4BQ9NT99 713 aa20.29■□□□□ 0.84
C19orf54-202ENST00000469741 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
C19orf54-202ENST00000469741 CLUAP1Q96AJ1 413 aa20.28■□□□□ 0.84
C19orf54-202ENST00000469741 PSDA5PKW4 1024 aaPredicted RBP20.27■□□□□ 0.84
C19orf54-202ENST00000469741 ZNF428Q96B54 188 aa20.27■□□□□ 0.84
C19orf54-202ENST00000469741 COG6Q9Y2V7 657 aa20.27■□□□□ 0.84
C19orf54-202ENST00000469741 PLSCR1O15162 318 aa20.26■□□□□ 0.83
C19orf54-202ENST00000469741 TXNRD1Q16881 649 aa20.26■□□□□ 0.83
C19orf54-202ENST00000469741 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
C19orf54-202ENST00000469741 ANO8Q9HCE9 1232 aaPredicted RBP20.26■□□□□ 0.83
C19orf54-202ENST00000469741 VIRMAQ69YN4 1812 aaKnown RBP20.26■□□□□ 0.83
C19orf54-202ENST00000469741 ZKSCAN2Q63HK3 967 aa20.26■□□□□ 0.83
C19orf54-202ENST00000469741 ASAP1Q9ULH1 1129 aa20.26■□□□□ 0.83
C19orf54-202ENST00000469741 NUP188Q5SRE5 1749 aa20.25■□□□□ 0.83
C19orf54-202ENST00000469741 RREB1Q92766 1687 aa20.25■□□□□ 0.83
C19orf54-202ENST00000469741 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
C19orf54-202ENST00000469741 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
C19orf54-202ENST00000469741 ALDH1L2Q3SY69 923 aa20.24■□□□□ 0.83
C19orf54-202ENST00000469741 ZNF853P0CG23 659 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 RLBP1P12271 317 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 GNAI1P63096 354 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 ANP32EQ9BTT0 268 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 PDGFDQ9GZP0 370 aaPredicted RBP20.23■□□□□ 0.83
C19orf54-202ENST00000469741 SMC4Q9NTJ3 1288 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 PDE4AP27815 886 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 DCTN1Q14203 1278 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 IL17REQ8NFR9 667 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 SSH1Q8WYL5 1049 aa20.23■□□□□ 0.83
C19orf54-202ENST00000469741 BRPF1P55201 1214 aaPredicted RBP20.22■□□□□ 0.83
C19orf54-202ENST00000469741 AKAP4Q5JQC9 854 aa20.22■□□□□ 0.83
C19orf54-202ENST00000469741 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
C19orf54-202ENST00000469741 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
C19orf54-202ENST00000469741 DLG5Q8TDM6 1919 aa20.22■□□□□ 0.83
C19orf54-202ENST00000469741 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
C19orf54-202ENST00000469741 C1orf141Q5JVX7 400 aa20.21■□□□□ 0.83
C19orf54-202ENST00000469741 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
C19orf54-202ENST00000469741 DCAF5Q96JK2 942 aa20.21■□□□□ 0.83
C19orf54-202ENST00000469741 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
C19orf54-202ENST00000469741 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
C19orf54-202ENST00000469741 ATG3Q9NT62 314 aa20.21■□□□□ 0.83
C19orf54-202ENST00000469741 GOLGB1Q14789 3259 aaKnown RBP20.2■□□□□ 0.82
C19orf54-202ENST00000469741 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
C19orf54-202ENST00000469741 SLC4A9Q96Q91 983 aa20.2■□□□□ 0.82
C19orf54-202ENST00000469741 KIF16BQ96L93 1317 aa20.2■□□□□ 0.82
C19orf54-202ENST00000469741 MSH5O43196 834 aa20.19■□□□□ 0.82
C19orf54-202ENST00000469741 TMOD3Q9NYL9 352 aa20.19■□□□□ 0.82
C19orf54-202ENST00000469741 TNNQ9UQP3 1299 aa20.19■□□□□ 0.82
C19orf54-202ENST00000469741 LY75O60449 1722 aa20.19■□□□□ 0.82
C19orf54-202ENST00000469741 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
C19orf54-202ENST00000469741 IGHDP01880 384 aa20.18■□□□□ 0.82
C19orf54-202ENST00000469741 ATF7IPQ6VMQ6 1270 aa20.18■□□□□ 0.82
C19orf54-202ENST00000469741 MCM10Q7L590 875 aa20.18■□□□□ 0.82
C19orf54-202ENST00000469741 CFAP44Q96MT7 982 aa20.18■□□□□ 0.82
C19orf54-202ENST00000469741 CABP4P57796 275 aa20.18■□□□□ 0.82
C19orf54-202ENST00000469741 SLC39A6Q13433 755 aa20.18■□□□□ 0.82
C19orf54-202ENST00000469741 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
C19orf54-202ENST00000469741 FTSJ3Q8IY81 847 aaKnown RBP20.18■□□□□ 0.82
C19orf54-202ENST00000469741 TRIM27P14373 513 aa20.17■□□□□ 0.82
C19orf54-202ENST00000469741 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
C19orf54-202ENST00000469741 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
C19orf54-202ENST00000469741 PALLDQ8WX93 1383 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms