RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RGS17Q9UGC6 210 aaPredicted RBP8.93□□□□□ -0.98
PTCD3-207ENST00000467273 TNRQ92752 1358 aa8.93□□□□□ -0.98
PTCD3-207ENST00000467273 PZPP20742 1482 aa8.93□□□□□ -0.98
PTCD3-207ENST00000467273 IQGAP1P46940 1657 aa8.92□□□□□ -0.98
PTCD3-207ENST00000467273 LRRC7Q96NW7 1537 aa8.92□□□□□ -0.98
PTCD3-207ENST00000467273 NPHP4O75161 1426 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-207ENST00000467273 UPP2O95045 317 aa8.92□□□□□ -0.98
PTCD3-207ENST00000467273 GSK3AP49840 483 aa8.92□□□□□ -0.98
PTCD3-207ENST00000467273 GGT6Q6P531 493 aa8.92□□□□□ -0.98
PTCD3-207ENST00000467273 SPIRE2Q8WWL2 714 aa8.92□□□□□ -0.98
PTCD3-207ENST00000467273 MOXD2PA6NHM9 499 aa8.91□□□□□ -0.98
PTCD3-207ENST00000467273 GDF11O95390 407 aa8.91□□□□□ -0.98
PTCD3-207ENST00000467273 MTMR2Q13614 643 aa8.91□□□□□ -0.98
PTCD3-207ENST00000467273 FOXJ1Q92949 421 aa8.91□□□□□ -0.98
PTCD3-207ENST00000467273 UGGT1Q9NYU2 1555 aa8.9□□□□□ -0.98
PTCD3-207ENST00000467273 KDM5DQ9BY66 1539 aa8.9□□□□□ -0.98
PTCD3-207ENST00000467273 CASKIN1Q8WXD9 1431 aa8.9□□□□□ -0.98
PTCD3-207ENST00000467273 GPATCH8Q9UKJ3 1502 aaKnown RBP8.9□□□□□ -0.99
PTCD3-207ENST00000467273 RTEL1-TNFRSF6BF6WH68 1400 aa8.89□□□□□ -0.99
PTCD3-207ENST00000467273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTCD3-207ENST00000467273 RNF225M0QZC1 329 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-207ENST00000467273 NR3C2P08235 984 aa8.89□□□□□ -0.99
PTCD3-207ENST00000467273 RASSF7Q02833 373 aa8.89□□□□□ -0.99
PTCD3-207ENST00000467273 AGERQ15109 404 aa8.89□□□□□ -0.99
PTCD3-207ENST00000467273 LINC00528Q8N1L1 170 aa8.89□□□□□ -0.99
PTCD3-207ENST00000467273 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
PTCD3-207ENST00000467273 FAM135BQ49AJ0 1406 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 MIA2Q96PC5 1412 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 SPDYE5A6NIY4 337 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
PTCD3-207ENST00000467273 HNRNPMP52272 730 aaKnown RBP eCLIP8.88□□□□□ -0.99
PTCD3-207ENST00000467273 DESI1Q6ICB0 168 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 CDK15Q96Q40 435 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 STRCP1A6NGW2 1772 aa8.88□□□□□ -0.99
PTCD3-207ENST00000467273 DHX29Q7Z478 1369 aaKnown RBP8.87□□□□□ -0.99
PTCD3-207ENST00000467273 ZMYND10O75800 440 aa8.87□□□□□ -0.99
PTCD3-207ENST00000467273 NR5A1Q13285 461 aa8.87□□□□□ -0.99
PTCD3-207ENST00000467273 MAP10Q9P2G4 905 aa8.87□□□□□ -0.99
PTCD3-207ENST00000467273 DNMT3LQ9UJW3 386 aa8.87□□□□□ -0.99
PTCD3-207ENST00000467273 FYCO1Q9BQS8 1478 aa8.87□□□□□ -0.99
PTCD3-207ENST00000467273 ZC3H13Q5T200 1668 aaKnown RBP8.86□□□□□ -0.99
PTCD3-207ENST00000467273 KRT76Q01546 638 aa8.86□□□□□ -0.99
PTCD3-207ENST00000467273 TTLL12Q14166 644 aaPredicted RBP8.86□□□□□ -0.99
PTCD3-207ENST00000467273 POTEAQ6S8J7 498 aa8.86□□□□□ -0.99
PTCD3-207ENST00000467273 MEIOBQ8N635 442 aa8.86□□□□□ -0.99
PTCD3-207ENST00000467273 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
PTCD3-207ENST00000467273 ZNF777Q9ULD5 760 aaPredicted RBP8.86□□□□□ -0.99
PTCD3-207ENST00000467273 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
PTCD3-207ENST00000467273 BRPF1P55201 1214 aaPredicted RBP8.85□□□□□ -0.99
PTCD3-207ENST00000467273 ADAMTS8Q9UP79 889 aa8.85□□□□□ -0.99
PTCD3-207ENST00000467273 SOS2Q07890 1332 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-207ENST00000467273 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
PTCD3-207ENST00000467273 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-207ENST00000467273 LYPD8Q6UX82 237 aa8.84□□□□□ -0.99
PTCD3-207ENST00000467273 LRRC9Q6ZRR7 1453 aa8.83□□□□□ -1
PTCD3-207ENST00000467273 WASHC2CQ9Y4E1 1318 aa8.83□□□□□ -1
PTCD3-207ENST00000467273 SPTLC1O15269 473 aa8.83□□□□□ -1
PTCD3-207ENST00000467273 BARGINQ6ZT62 677 aa8.83□□□□□ -1
PTCD3-207ENST00000467273 GPR161Q8N6U8 529 aaKnown RBP8.83□□□□□ -1
PTCD3-207ENST00000467273 CCNB3Q8WWL7 1395 aa8.83□□□□□ -1
PTCD3-207ENST00000467273 MBD5Q9P267 1494 aa8.83□□□□□ -1
PTCD3-207ENST00000467273 XIRP1Q702N8 1843 aaKnown RBP8.82□□□□□ -1
PTCD3-207ENST00000467273 FSHRP23945 695 aa8.82□□□□□ -1
PTCD3-207ENST00000467273 GRM5P41594 1212 aa8.82□□□□□ -1
PTCD3-207ENST00000467273 C4orf48Q5BLP8 95 aa8.82□□□□□ -1
PTCD3-207ENST00000467273 SVOPQ8N4V2 548 aa8.82□□□□□ -1
PTCD3-207ENST00000467273 SCAF11Q99590 1463 aaKnown RBP8.82□□□□□ -1
PTCD3-207ENST00000467273 SETD1AO15047 1707 aaKnown RBP8.81□□□□□ -1
PTCD3-207ENST00000467273 CFAP99D6REC4 459 aa8.81□□□□□ -1
PTCD3-207ENST00000467273 KIF3BO15066 747 aa8.81□□□□□ -1
PTCD3-207ENST00000467273 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -1
PTCD3-207ENST00000467273 GPAT2Q6NUI2 795 aa8.81□□□□□ -1
PTCD3-207ENST00000467273 BPHLQ86WA6 291 aaPredicted RBP8.81□□□□□ -1
PTCD3-207ENST00000467273 COL25A1Q9BXS0 654 aaPredicted RBP8.81□□□□□ -1
PTCD3-207ENST00000467273 SRCAPQ6ZRS2 3230 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 SLIT1O75093 1534 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 PTSQ03393 145 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 NEUROD2Q15784 382 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 TSEN34Q9BSV6 310 aaKnown RBP8.8□□□□□ -1
PTCD3-207ENST00000467273 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 ARHGAP23Q9P227 1491 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 ROBO1Q9Y6N7 1651 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 UBR1Q8IWV7 1749 aa8.8□□□□□ -1
PTCD3-207ENST00000467273 TTLL8A6PVC2 850 aa8.79□□□□□ -1
PTCD3-207ENST00000467273 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
PTCD3-207ENST00000467273 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
PTCD3-207ENST00000467273 ERVK-7P63135 1459 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 CCDC141Q6ZP82 1450 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 JCADQ9P266 1359 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 FIGNL2A6NMB9 653 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 IRS1P35568 1242 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 ZNF385CQ66K41 422 aaPredicted RBP8.78□□□□□ -1
PTCD3-207ENST00000467273 RSBN1LQ6PCB5 846 aaPredicted RBP8.78□□□□□ -1
PTCD3-207ENST00000467273 GIGYF2Q6Y7W6 1299 aaKnown RBP8.78□□□□□ -1
PTCD3-207ENST00000467273 TSC1Q92574 1164 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 PCDHB15Q9Y5E8 787 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 TIAM1Q13009 1591 aa8.78□□□□□ -1
PTCD3-207ENST00000467273 CAMSAP2Q08AD1 1489 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms