RNA–Protein interactions for RNA: ENST00000466987.1

PSMD2-211, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-211	ENST00000466987	SLC52A2	Q9HAB3	445 aa		13.83	□□□□□ -0.2
PSMD2-211	ENST00000466987	BTAF1	O14981	1849 aa		13.83	□□□□□ -0.2
PSMD2-211	ENST00000466987	TNS1	Q9HBL0	1735 aa	Known RBP	13.82	□□□□□ -0.2
PSMD2-211	ENST00000466987	KCNQ2	O43526	872 aa		13.82	□□□□□ -0.2
PSMD2-211	ENST00000466987	TRIM37	O94972	964 aa		13.82	□□□□□ -0.2
PSMD2-211	ENST00000466987	NCBP3	Q53F19	620 aa	Known RBP	13.82	□□□□□ -0.2
PSMD2-211	ENST00000466987	PTF1A	Q7RTS3	328 aa		13.81	□□□□□ -0.2
PSMD2-211	ENST00000466987	WWC1	Q8IX03	1113 aa		13.81	□□□□□ -0.2
PSMD2-211	ENST00000466987	NFATC2IP	Q8NCF5	419 aa		13.81	□□□□□ -0.2
PSMD2-211	ENST00000466987	PAPPA	Q13219	1627 aa		13.8	□□□□□ -0.2
PSMD2-211	ENST00000466987	CALD1	Q05682	793 aa	Known RBP	13.8	□□□□□ -0.2
PSMD2-211	ENST00000466987	PIGB	Q92521	554 aa		13.8	□□□□□ -0.2
PSMD2-211	ENST00000466987	YTHDC1	Q96MU7	727 aa	Known RBP	13.8	□□□□□ -0.2
PSMD2-211	ENST00000466987	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.8	□□□□□ -0.2
PSMD2-211	ENST00000466987	EP400	Q96L91	3159 aa		13.79	□□□□□ -0.2
PSMD2-211	ENST00000466987	LAS1L	Q9Y4W2	734 aa	Known RBP	13.79	□□□□□ -0.2
PSMD2-211	ENST00000466987	KDM3B	Q7LBC6	1761 aa		13.78	□□□□□ -0.2
PSMD2-211	ENST00000466987	BTBD11	A6QL63	1104 aa		13.78	□□□□□ -0.2
PSMD2-211	ENST00000466987	TAF7	Q15545	349 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD2-211	ENST00000466987	ZNF521	Q96K83	1311 aa		13.78	□□□□□ -0.2
PSMD2-211	ENST00000466987	SLC39A6	Q13433	755 aa		13.77	□□□□□ -0.21
PSMD2-211	ENST00000466987	ZBED9	Q6R2W3	1325 aa		13.77	□□□□□ -0.21
PSMD2-211	ENST00000466987	WDR63	Q8IWG1	891 aa		13.77	□□□□□ -0.21
PSMD2-211	ENST00000466987	MIS18A	Q9NYP9	233 aa		13.77	□□□□□ -0.21
PSMD2-211	ENST00000466987	TSPYL4	Q9UJ04	414 aa		13.77	□□□□□ -0.21
PSMD2-211	ENST00000466987	UBR2	Q8IWV8	1755 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	PALLD	Q8WX93	1383 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	GNAI1	P63096	354 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	SF3B2	Q13435	895 aa	Known RBP	13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	TTC5	Q8N0Z6	440 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	CFAP44	Q96MT7	982 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	ATG3	Q9NT62	314 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	IFT57	Q9NWB7	429 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	ASAP1	Q9ULH1	1129 aa		13.76	□□□□□ -0.21
PSMD2-211	ENST00000466987	IL16	Q14005	1332 aa		13.75	□□□□□ -0.21
PSMD2-211	ENST00000466987	APBA3	O96018	575 aa		13.75	□□□□□ -0.21
PSMD2-211	ENST00000466987	ZNF790	Q6PG37	636 aa		13.75	□□□□□ -0.21
PSMD2-211	ENST00000466987	SMARCC1	Q92922	1105 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD2-211	ENST00000466987	LY75	O60449	1722 aa		13.75	□□□□□ -0.21
PSMD2-211	ENST00000466987	KCP	Q6ZWJ8	1503 aa		13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	RGPD4	Q7Z3J3	1758 aa		13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	CHL1	O00533	1208 aa		13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	KCNQ3	O43525	872 aa		13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	GOLGA2	Q08379	1002 aa		13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	TSR2	Q969E8	191 aa	Known RBP	13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	MBIP	Q9NS73	344 aa		13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	BABAM1	Q9NWV8	329 aa		13.74	□□□□□ -0.21
PSMD2-211	ENST00000466987	ZNF853	P0CG23	659 aa		13.73	□□□□□ -0.21
PSMD2-211	ENST00000466987	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMD2-211	ENST00000466987	FANCI	Q9NVI1	1328 aa		13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987	PTCD1	O75127	700 aa	Known RBP	13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987	BAG6	P46379	1132 aa		13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987	CCDC125	Q86Z20	511 aa		13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987	CDCA7L	Q96GN5	454 aa		13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987	RBM42	Q9BTD8	480 aa	Known RBP	13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987	MYH16	Q9H6N6	1097 aa		13.72	□□□□□ -0.21
PSMD2-211	ENST00000466987		E9PSI1	815 aa		13.71	□□□□□ -0.21
PSMD2-211	ENST00000466987	ZNF496	Q96IT1	587 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD2-211	ENST00000466987	FMNL2	Q96PY5	1086 aa		13.71	□□□□□ -0.21
PSMD2-211	ENST00000466987	TJP1	Q07157	1748 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	C5	P01031	1676 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	LOC102724428	A0A0B4J2F2	783 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	PLSCR1	O15162	318 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	SIK1	P57059	783 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	EIF4A1	P60842	406 aa	Known RBP	13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	EN1	Q05925	392 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	SLFN5	Q08AF3	891 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	DEFB132	Q7Z7B7	95 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	CCNL1	Q9UK58	526 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	HEG1	Q9ULI3	1381 aa		13.7	□□□□□ -0.22
PSMD2-211	ENST00000466987	ZNF831	Q5JPB2	1677 aa		13.69	□□□□□ -0.22
PSMD2-211	ENST00000466987	CIC	Q96RK0	1608 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMD2-211	ENST00000466987	LAMB4	A4D0S4	1761 aa		13.69	□□□□□ -0.22
PSMD2-211	ENST00000466987	RREB1	Q92766	1687 aa		13.69	□□□□□ -0.22
PSMD2-211	ENST00000466987	ATP6V1A	P38606	617 aa		13.68	□□□□□ -0.22
PSMD2-211	ENST00000466987	KCNQ4	P56696	695 aa		13.68	□□□□□ -0.22
PSMD2-211	ENST00000466987	EZH2	Q15910	746 aa	Known RBP	13.68	□□□□□ -0.22
PSMD2-211	ENST00000466987	TXNRD1	Q16881	649 aa		13.68	□□□□□ -0.22
PSMD2-211	ENST00000466987	KRT24	Q2M2I5	525 aa		13.68	□□□□□ -0.22
PSMD2-211	ENST00000466987	SLC4A9	Q96Q91	983 aa		13.68	□□□□□ -0.22
PSMD2-211	ENST00000466987	COL5A3	P25940	1745 aa	Predicted RBP	13.67	□□□□□ -0.22
PSMD2-211	ENST00000466987	TAF1L	Q8IZX4	1826 aa		13.67	□□□□□ -0.22
PSMD2-211	ENST00000466987	DNAJC10	Q8IXB1	793 aa		13.67	□□□□□ -0.22
PSMD2-211	ENST00000466987	VSIG10	Q8N0Z9	540 aa		13.67	□□□□□ -0.22
PSMD2-211	ENST00000466987	CAMKK2	Q96RR4	588 aa		13.67	□□□□□ -0.22
PSMD2-211	ENST00000466987	PRAMEF22	A3QJZ6	481 aa		13.66	□□□□□ -0.22
PSMD2-211	ENST00000466987	GIGYF1	O75420	1035 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMD2-211	ENST00000466987	SNRPA1	P09661	255 aa	Known RBP	13.66	□□□□□ -0.22
PSMD2-211	ENST00000466987	EXOSC9	Q06265	439 aa	Known RBP	13.66	□□□□□ -0.22
PSMD2-211	ENST00000466987	ITPK1	Q13572	414 aa		13.66	□□□□□ -0.22
PSMD2-211	ENST00000466987	SLC27A3	Q5K4L6	730 aa		13.66	□□□□□ -0.22
PSMD2-211	ENST00000466987	NUP188	Q5SRE5	1749 aa		13.66	□□□□□ -0.22
PSMD2-211	ENST00000466987	ELL2	O00472	640 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMD2-211	ENST00000466987	DUSP27	Q5VZP5	1158 aa		13.65	□□□□□ -0.22
PSMD2-211	ENST00000466987	TRMT2A	Q8IZ69	625 aa	Known RBP	13.65	□□□□□ -0.22
PSMD2-211	ENST00000466987	PROM2	Q8N271	834 aa		13.65	□□□□□ -0.22
PSMD2-211	ENST00000466987	C8orf58	Q8NAV2	365 aa		13.65	□□□□□ -0.22
PSMD2-211	ENST00000466987	CNKSR2	Q8WXI2	1034 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms