RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 THSD7BQ9C0I4 1608 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 VEGFAP15692 232 aaPredicted RBP8□□□□□ -1.13
CXXC4-202ENST00000466963 NBPF1Q3BBV0 1214 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 AMOTQ4VCS5 1084 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 TRAPPC3LQ5T215 181 aa8□□□□□ -1.13
CXXC4-202ENST00000466963 DICER1Q9UPY3 1922 aaKnown RBP8□□□□□ -1.13
CXXC4-202ENST00000466963 DALRD3Q5D0E6 543 aaKnown RBP7.99□□□□□ -1.13
CXXC4-202ENST00000466963 CREBZFQ9NS37 354 aa7.99□□□□□ -1.13
CXXC4-202ENST00000466963 SCN4AP35499 1836 aa7.99□□□□□ -1.13
CXXC4-202ENST00000466963 IFNL2Q8IZJ0 200 aa7.99□□□□□ -1.13
CXXC4-202ENST00000466963 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
CXXC4-202ENST00000466963 LOC102724428A0A0B4J2F2 783 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 CTCFP49711 727 aaPredicted RBP7.98□□□□□ -1.13
CXXC4-202ENST00000466963 SIK1P57059 783 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 KLHL34Q8N239 644 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 A0A087WZG4 1122 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 CA12O43570 354 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 RGS19P49795 217 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 TMOD3Q9NYL9 352 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.98□□□□□ -1.13
CXXC4-202ENST00000466963 KCNA4P22459 653 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 AIDAQ96BJ3 306 aa7.98□□□□□ -1.13
CXXC4-202ENST00000466963 LMNB1P20700 586 aa7.97□□□□□ -1.13
CXXC4-202ENST00000466963 WWC3Q9ULE0 1092 aa7.97□□□□□ -1.13
CXXC4-202ENST00000466963 TIMELESSQ9UNS1 1208 aa7.97□□□□□ -1.13
CXXC4-202ENST00000466963 SBF1O95248 1867 aa7.97□□□□□ -1.13
CXXC4-202ENST00000466963 IQCA1LA6NCM1 817 aa7.97□□□□□ -1.13
CXXC4-202ENST00000466963 DPY19L2Q6NUT2 758 aa7.97□□□□□ -1.13
CXXC4-202ENST00000466963 GLTPD2A6NH11 291 aa7.96□□□□□ -1.13
CXXC4-202ENST00000466963 NME9Q86XW9 330 aa7.96□□□□□ -1.13
CXXC4-202ENST00000466963 TIAM2Q8IVF5 1701 aa7.96□□□□□ -1.14
CXXC4-202ENST00000466963 VSIG10Q8N0Z9 540 aa7.96□□□□□ -1.14
CXXC4-202ENST00000466963 SYTL4Q96C24 671 aaPredicted RBP7.96□□□□□ -1.14
CXXC4-202ENST00000466963 VIRMAQ69YN4 1812 aaKnown RBP7.95□□□□□ -1.14
CXXC4-202ENST00000466963 FCHSD2O94868 740 aa7.95□□□□□ -1.14
CXXC4-202ENST00000466963 C9orf131Q5VYM1 1079 aa7.95□□□□□ -1.14
CXXC4-202ENST00000466963 ARHGAP27Q6ZUM4 889 aa7.95□□□□□ -1.14
CXXC4-202ENST00000466963 L3MBTL2Q969R5 705 aa7.95□□□□□ -1.14
CXXC4-202ENST00000466963 MRC1P22897 1456 aa7.95□□□□□ -1.14
CXXC4-202ENST00000466963 MMP10P09238 476 aa7.94□□□□□ -1.14
CXXC4-202ENST00000466963 RGPD2P0DJD1 1756 aa7.94□□□□□ -1.14
CXXC4-202ENST00000466963 RFC4P35249 363 aa7.94□□□□□ -1.14
CXXC4-202ENST00000466963 MAP2K1Q02750 393 aaPredicted RBP7.94□□□□□ -1.14
CXXC4-202ENST00000466963 TEX13AQ9BXU3 409 aaPredicted RBP7.94□□□□□ -1.14
CXXC4-202ENST00000466963 VPS33BQ9H267 617 aa7.94□□□□□ -1.14
CXXC4-202ENST00000466963 CNTNAP1P78357 1384 aa7.94□□□□□ -1.14
CXXC4-202ENST00000466963 PLEKHO1Q53GL0 409 aaPredicted RBP7.94□□□□□ -1.14
CXXC4-202ENST00000466963 CHADLQ6NUI6 762 aa7.93□□□□□ -1.14
CXXC4-202ENST00000466963 HHIPL1Q96JK4 782 aa7.93□□□□□ -1.14
CXXC4-202ENST00000466963 CARD11Q9BXL7 1154 aa7.93□□□□□ -1.14
CXXC4-202ENST00000466963 ADAMTS7Q9UKP4 1686 aa7.93□□□□□ -1.14
CXXC4-202ENST00000466963 N4BP2Q86UW6 1770 aaPredicted RBP7.93□□□□□ -1.14
CXXC4-202ENST00000466963 HSPA1AP0DMV8 641 aaKnown RBP7.93□□□□□ -1.14
CXXC4-202ENST00000466963 HSPA1BP0DMV9 641 aaKnown RBP7.93□□□□□ -1.14
CXXC4-202ENST00000466963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.93□□□□□ -1.14
CXXC4-202ENST00000466963 REM2Q8IYK8 340 aaPredicted RBP7.93□□□□□ -1.14
CXXC4-202ENST00000466963 L3MBTL3Q96JM7 780 aaPredicted RBP7.93□□□□□ -1.14
CXXC4-202ENST00000466963 GNPATO15228 680 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 LDHDQ86WU2 507 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 USP42Q9H9J4 1324 aaKnown RBP7.92□□□□□ -1.14
CXXC4-202ENST00000466963 PHKG2P15735 406 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 ATP6V1AP38606 617 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 ECE1P42892 770 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 NBPF6Q5VWK0 638 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 CC2D2BQ6DHV5 1058 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 PIGBQ92521 554 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 NBPF4Q96M43 638 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 BCS1LQ9Y276 419 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 PDE6BP35913 854 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 LINC00116Q8NCU8 138 aa7.92□□□□□ -1.14
CXXC4-202ENST00000466963 KCPQ6ZWJ8 1503 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 CYP27B1O15528 508 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 GYS1P13807 737 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 PNMA8AQ86V59 439 aaPredicted RBP7.91□□□□□ -1.14
CXXC4-202ENST00000466963 RIC1Q4ADV7 1423 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 TM4SF1P30408 202 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 TJP1Q07157 1748 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 STYK1Q6J9G0 422 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 TMC1Q8TDI8 760 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 CNKSR2Q8WXI2 1034 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 RNF181Q9P0P0 153 aa7.91□□□□□ -1.14
CXXC4-202ENST00000466963 DPEP1P16444 411 aa7.9□□□□□ -1.14
CXXC4-202ENST00000466963 TTLL6Q8N841 843 aa7.9□□□□□ -1.14
CXXC4-202ENST00000466963 FER1L6Q2WGJ9 1857 aa7.9□□□□□ -1.14
CXXC4-202ENST00000466963 SCN11AQ9UI33 1791 aa7.9□□□□□ -1.14
CXXC4-202ENST00000466963 CNKSR1Q969H4 720 aa7.9□□□□□ -1.14
CXXC4-202ENST00000466963 FYB1O15117 783 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 KCNA3P22001 575 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 GCC1Q96CN9 775 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 SCN7AQ01118 1682 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 ADAMTSL1Q8N6G6 1762 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 RASSF10A6NK89 507 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 MPRIPQ6WCQ1 1025 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 NMRK2Q9NPI5 230 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 ATG3Q9NT62 314 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 NARFQ9UHQ1 456 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 CDHR2Q9BYE9 1310 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 MSL1Q68DK7 614 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 TESK2Q96S53 571 aa7.89□□□□□ -1.15
CXXC4-202ENST00000466963 SLC12A5Q9H2X9 1139 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms