RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 ITSN1Q15811 1721 aa18.5■□□□□ 0.55
GAPDH-206ENST00000466525 C1orf167Q5SNV9 1468 aa18.5■□□□□ 0.55
GAPDH-206ENST00000466525 HSP90AA2PQ14568 343 aaPredicted RBP18.49■□□□□ 0.55
GAPDH-206ENST00000466525 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
GAPDH-206ENST00000466525 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
GAPDH-206ENST00000466525 NRXN3Q9Y4C0 1643 aa18.49■□□□□ 0.55
GAPDH-206ENST00000466525 TUBGCP6Q96RT7 1819 aa18.49■□□□□ 0.55
GAPDH-206ENST00000466525 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
GAPDH-206ENST00000466525 PTPRCP08575 1304 aa18.49■□□□□ 0.55
GAPDH-206ENST00000466525 DDX17Q92841 729 aaKnown RBP18.48■□□□□ 0.55
GAPDH-206ENST00000466525 SIRT1Q96EB6 747 aa18.48■□□□□ 0.55
GAPDH-206ENST00000466525 AK9Q5TCS8 1911 aa18.48■□□□□ 0.55
GAPDH-206ENST00000466525 ST18O60284 1047 aa18.47■□□□□ 0.55
GAPDH-206ENST00000466525 C8orf58Q8NAV2 365 aa18.47■□□□□ 0.55
GAPDH-206ENST00000466525 PDLIM2Q96JY6 352 aa18.47■□□□□ 0.55
GAPDH-206ENST00000466525 LMBRD1Q9NUN5 540 aa18.47■□□□□ 0.55
GAPDH-206ENST00000466525 OFD1O75665 1012 aa18.46■□□□□ 0.55
GAPDH-206ENST00000466525 REC8O95072 547 aa18.46■□□□□ 0.55
GAPDH-206ENST00000466525 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
GAPDH-206ENST00000466525 ATRNO75882 1429 aa18.46■□□□□ 0.55
GAPDH-206ENST00000466525 RGPD1P0DJD0 1748 aa18.45■□□□□ 0.54
GAPDH-206ENST00000466525 TECPR2O15040 1411 aa18.45■□□□□ 0.54
GAPDH-206ENST00000466525 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.45■□□□□ 0.54
GAPDH-206ENST00000466525 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
GAPDH-206ENST00000466525 HMOX1P09601 288 aa18.44■□□□□ 0.54
GAPDH-206ENST00000466525 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
GAPDH-206ENST00000466525 SRCAPQ6ZRS2 3230 aa18.44■□□□□ 0.54
GAPDH-206ENST00000466525 MCM5P33992 734 aa18.43■□□□□ 0.54
GAPDH-206ENST00000466525 MCM2P49736 904 aa18.43■□□□□ 0.54
GAPDH-206ENST00000466525 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
GAPDH-206ENST00000466525 THUMPD2Q9BTF0 503 aaKnown RBP18.43■□□□□ 0.54
GAPDH-206ENST00000466525 N4BP2Q86UW6 1770 aaPredicted RBP18.43■□□□□ 0.54
GAPDH-206ENST00000466525 NPHP3Q7Z494 1330 aa18.43■□□□□ 0.54
GAPDH-206ENST00000466525 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
GAPDH-206ENST00000466525 ZSCAN23Q3MJ62 389 aa18.43■□□□□ 0.54
GAPDH-206ENST00000466525 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
GAPDH-206ENST00000466525 WASLO00401 505 aaPredicted RBP18.42■□□□□ 0.54
GAPDH-206ENST00000466525 CHL1O00533 1208 aa18.42■□□□□ 0.54
GAPDH-206ENST00000466525 ZNF500O60304 480 aaPredicted RBP18.42■□□□□ 0.54
GAPDH-206ENST00000466525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
GAPDH-206ENST00000466525 ORAI2Q96SN7 254 aa18.42■□□□□ 0.54
GAPDH-206ENST00000466525 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
GAPDH-206ENST00000466525 NOL7Q9UMY1 257 aaKnown RBP18.41■□□□□ 0.54
GAPDH-206ENST00000466525 EPB41L2O43491 1005 aaKnown RBP18.4■□□□□ 0.54
GAPDH-206ENST00000466525 SDSP20132 328 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 MSNP26038 577 aaKnown RBP18.4■□□□□ 0.54
GAPDH-206ENST00000466525 MCTP1Q6DN14 999 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 COG3Q96JB2 828 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 CACNA1FO60840 1977 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 ARHGEF10O15013 1369 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 ERC2O15083 957 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 HMMRO75330 724 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 MBD3O95983 291 aa18.4■□□□□ 0.54
GAPDH-206ENST00000466525 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
GAPDH-206ENST00000466525 SSH2Q76I76 1423 aa18.39■□□□□ 0.53
GAPDH-206ENST00000466525 COL22A1Q8NFW1 1626 aaPredicted RBP18.39■□□□□ 0.53
GAPDH-206ENST00000466525 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
GAPDH-206ENST00000466525 PDCL3Q9H2J4 239 aa18.39■□□□□ 0.53
GAPDH-206ENST00000466525 TOPAZ1Q8N9V7 1692 aa18.38■□□□□ 0.53
GAPDH-206ENST00000466525 ANAPC15P60006 121 aa18.37■□□□□ 0.53
GAPDH-206ENST00000466525 ELL2O00472 640 aaPredicted RBP18.37■□□□□ 0.53
GAPDH-206ENST00000466525 CAVIN1Q6NZI2 390 aaKnown RBP18.37■□□□□ 0.53
GAPDH-206ENST00000466525 LRSAM1Q6UWE0 723 aa18.37■□□□□ 0.53
GAPDH-206ENST00000466525 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
GAPDH-206ENST00000466525 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
GAPDH-206ENST00000466525 CUL4AQ13619 759 aa18.36■□□□□ 0.53
GAPDH-206ENST00000466525 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
GAPDH-206ENST00000466525 NME9Q86XW9 330 aa18.36■□□□□ 0.53
GAPDH-206ENST00000466525 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
GAPDH-206ENST00000466525 MAP7D2Q96T17 732 aa18.36■□□□□ 0.53
GAPDH-206ENST00000466525 CCDC61Q9Y6R9 512 aa18.36■□□□□ 0.53
GAPDH-206ENST00000466525 BCL9LQ86UU0 1499 aa18.36■□□□□ 0.53
GAPDH-206ENST00000466525 ESCO1Q5FWF5 840 aa18.35■□□□□ 0.53
GAPDH-206ENST00000466525 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
GAPDH-206ENST00000466525 CRB1P82279 1406 aa18.35■□□□□ 0.53
GAPDH-206ENST00000466525 CSPP1Q1MSJ5 1256 aa18.35■□□□□ 0.53
GAPDH-206ENST00000466525 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
GAPDH-206ENST00000466525 RBSNQ9H1K0 784 aa18.35■□□□□ 0.53
GAPDH-206ENST00000466525 OVOS2A0A0J9YW53 1432 aa18.34■□□□□ 0.53
GAPDH-206ENST00000466525 OVOS2Q6IE36 1432 aa18.34■□□□□ 0.53
GAPDH-206ENST00000466525 CCT4P50991 539 aaKnown RBP18.34■□□□□ 0.53
GAPDH-206ENST00000466525 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
GAPDH-206ENST00000466525 UNC5CLQ8IV45 518 aa18.34■□□□□ 0.53
GAPDH-206ENST00000466525 GPT2Q8TD30 523 aa18.34■□□□□ 0.53
GAPDH-206ENST00000466525 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
GAPDH-206ENST00000466525 FBLN1P23142 703 aa18.33■□□□□ 0.52
GAPDH-206ENST00000466525 NUDT16Q96DE0 195 aaKnown RBP18.33■□□□□ 0.52
GAPDH-206ENST00000466525 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
GAPDH-206ENST00000466525 ZKSCAN5Q9Y2L8 839 aa18.32■□□□□ 0.52
GAPDH-206ENST00000466525 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
GAPDH-206ENST00000466525 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
GAPDH-206ENST00000466525 FAM83GA6ND36 823 aa18.32■□□□□ 0.52
GAPDH-206ENST00000466525 BRD1O95696 1058 aa18.32■□□□□ 0.52
GAPDH-206ENST00000466525 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
GAPDH-206ENST00000466525 PDE1AP54750 535 aa18.32■□□□□ 0.52
GAPDH-206ENST00000466525 AOX1Q06278 1338 aa18.31■□□□□ 0.52
GAPDH-206ENST00000466525 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
GAPDH-206ENST00000466525 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
GAPDH-206ENST00000466525 PRPF40AO75400 957 aaKnown RBP18.31■□□□□ 0.52
GAPDH-206ENST00000466525 MCCP23508 829 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms