RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 PALLDQ8WX93 1383 aa24.34■■□□□ 1.49
SCAMP3-204ENST00000465312 PLSCR1O15162 318 aa24.34■■□□□ 1.49
SCAMP3-204ENST00000465312 IL17REQ8NFR9 667 aa24.34■■□□□ 1.49
SCAMP3-204ENST00000465312 SMARCC1Q92922 1105 aaPredicted RBP24.34■■□□□ 1.49
SCAMP3-204ENST00000465312 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
SCAMP3-204ENST00000465312 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
SCAMP3-204ENST00000465312 ASAP1Q9ULH1 1129 aa24.32■■□□□ 1.48
SCAMP3-204ENST00000465312 ADAMTS7Q9UKP4 1686 aa24.31■■□□□ 1.48
SCAMP3-204ENST00000465312 TXNRD1Q16881 649 aa24.31■■□□□ 1.48
SCAMP3-204ENST00000465312 RBM42Q9BTD8 480 aaKnown RBP24.31■■□□□ 1.48
SCAMP3-204ENST00000465312 RGPD3A6NKT7 1758 aaPredicted RBP24.31■■□□□ 1.48
SCAMP3-204ENST00000465312 RGPD4Q7Z3J3 1758 aa24.31■■□□□ 1.48
SCAMP3-204ENST00000465312 MRC1P22897 1456 aa24.31■■□□□ 1.48
SCAMP3-204ENST00000465312 THUMPD2Q9BTF0 503 aaKnown RBP24.3■■□□□ 1.48
SCAMP3-204ENST00000465312 CCNL1Q9UK58 526 aaPredicted RBP24.3■■□□□ 1.48
SCAMP3-204ENST00000465312 TTC5Q8N0Z6 440 aa24.29■■□□□ 1.48
SCAMP3-204ENST00000465312 ATG3Q9NT62 314 aa24.29■■□□□ 1.48
SCAMP3-204ENST00000465312 BTBD11A6QL63 1104 aa24.28■■□□□ 1.48
SCAMP3-204ENST00000465312 SLC39A6Q13433 755 aa24.28■■□□□ 1.48
SCAMP3-204ENST00000465312 SALL2Q9Y467 1007 aaPredicted RBP24.28■■□□□ 1.48
SCAMP3-204ENST00000465312 CEMIPQ8WUJ3 1361 aa24.28■■□□□ 1.48
SCAMP3-204ENST00000465312 PTCD1O75127 700 aaKnown RBP24.27■■□□□ 1.48
SCAMP3-204ENST00000465312 KCNQ4P56696 695 aa24.27■■□□□ 1.48
SCAMP3-204ENST00000465312 RREB1Q92766 1687 aa24.27■■□□□ 1.48
SCAMP3-204ENST00000465312 LY75O60449 1722 aa24.26■■□□□ 1.47
SCAMP3-204ENST00000465312 SLC27A3Q5K4L6 730 aa24.25■■□□□ 1.47
SCAMP3-204ENST00000465312 LAS1LQ9Y4W2 734 aaKnown RBP24.25■■□□□ 1.47
SCAMP3-204ENST00000465312 NUP188Q5SRE5 1749 aa24.24■■□□□ 1.47
SCAMP3-204ENST00000465312 LOC102724428A0A0B4J2F2 783 aa24.24■■□□□ 1.47
SCAMP3-204ENST00000465312 SIK1P57059 783 aa24.24■■□□□ 1.47
SCAMP3-204ENST00000465312 NBPF14Q5TI25 921 aa24.24■■□□□ 1.47
SCAMP3-204ENST00000465312 SIPA1L3O60292 1781 aaPredicted RBP24.24■■□□□ 1.47
SCAMP3-204ENST00000465312 ATP6V1AP38606 617 aa24.23■■□□□ 1.47
SCAMP3-204ENST00000465312 TAF7Q15545 349 aaPredicted RBP24.23■■□□□ 1.47
SCAMP3-204ENST00000465312 PROM2Q8N271 834 aa24.22■■□□□ 1.47
SCAMP3-204ENST00000465312 TRIM35Q9UPQ4 493 aa24.22■■□□□ 1.47
SCAMP3-204ENST00000465312 MIS18AQ9NYP9 233 aa24.21■■□□□ 1.47
SCAMP3-204ENST00000465312 PAPPAQ13219 1627 aa24.21■■□□□ 1.47
SCAMP3-204ENST00000465312 ZNF790Q6PG37 636 aa24.2■■□□□ 1.46
SCAMP3-204ENST00000465312 LRRC4BQ9NT99 713 aa24.2■■□□□ 1.46
SCAMP3-204ENST00000465312 STK32BQ9NY57 414 aa24.2■■□□□ 1.46
SCAMP3-204ENST00000465312 TSPYL4Q9UJ04 414 aa24.19■■□□□ 1.46
SCAMP3-204ENST00000465312 CALD1Q05682 793 aaKnown RBP24.18■■□□□ 1.46
SCAMP3-204ENST00000465312 C5P01031 1676 aa24.18■■□□□ 1.46
SCAMP3-204ENST00000465312 FMNL2Q96PY5 1086 aa24.17■■□□□ 1.46
SCAMP3-204ENST00000465312 KCNQ3O43525 872 aa24.16■■□□□ 1.46
SCAMP3-204ENST00000465312 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
SCAMP3-204ENST00000465312 PSDA5PKW4 1024 aaPredicted RBP24.15■■□□□ 1.46
SCAMP3-204ENST00000465312 AK7Q96M32 723 aa24.15■■□□□ 1.46
SCAMP3-204ENST00000465312 KCPQ6ZWJ8 1503 aa24.15■■□□□ 1.46
SCAMP3-204ENST00000465312 R3HDM1Q15032 1099 aaKnown RBP24.14■■□□□ 1.45
SCAMP3-204ENST00000465312 ZNF496Q96IT1 587 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-204ENST00000465312 ANO8Q9HCE9 1232 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-204ENST00000465312 UBR2Q8IWV8 1755 aa24.14■■□□□ 1.45
SCAMP3-204ENST00000465312 ITPK1Q13572 414 aa24.13■■□□□ 1.45
SCAMP3-204ENST00000465312 TFCP2L1Q9NZI6 479 aa24.13■■□□□ 1.45
SCAMP3-204ENST00000465312 TAF1LQ8IZX4 1826 aa24.12■■□□□ 1.45
SCAMP3-204ENST00000465312 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
SCAMP3-204ENST00000465312 WWC1Q8IX03 1113 aa24.12■■□□□ 1.45
SCAMP3-204ENST00000465312 LINC00116Q8NCU8 138 aa24.12■■□□□ 1.45
SCAMP3-204ENST00000465312 SLC4A9Q96Q91 983 aa24.12■■□□□ 1.45
SCAMP3-204ENST00000465312 SLC15A2Q16348 729 aa24.11■■□□□ 1.45
SCAMP3-204ENST00000465312 ZNF827Q17R98 1081 aa24.11■■□□□ 1.45
SCAMP3-204ENST00000465312 CCDC27Q2M243 656 aa24.11■■□□□ 1.45
SCAMP3-204ENST00000465312 DNAJC10Q8IXB1 793 aa24.11■■□□□ 1.45
SCAMP3-204ENST00000465312 HEG1Q9ULI3 1381 aa24.11■■□□□ 1.45
SCAMP3-204ENST00000465312 C4BP0C0L5 1744 aa24.1■■□□□ 1.45
SCAMP3-204ENST00000465312 GNAI1P63096 354 aa24.1■■□□□ 1.45
SCAMP3-204ENST00000465312 TJP1Q07157 1748 aa24.1■■□□□ 1.45
SCAMP3-204ENST00000465312 MSH5O43196 834 aa24.09■■□□□ 1.45
SCAMP3-204ENST00000465312 VSIG10Q8N0Z9 540 aa24.09■■□□□ 1.45
SCAMP3-204ENST00000465312 NGEFQ8N5V2 710 aa24.09■■□□□ 1.45
SCAMP3-204ENST00000465312 ZNF831Q5JPB2 1677 aa24.08■■□□□ 1.45
SCAMP3-204ENST00000465312 GNPATO15228 680 aa24.08■■□□□ 1.45
SCAMP3-204ENST00000465312 PHF14O94880 888 aa24.08■■□□□ 1.45
SCAMP3-204ENST00000465312 CFAP44Q96MT7 982 aa24.08■■□□□ 1.45
SCAMP3-204ENST00000465312 IFT57Q9NWB7 429 aa24.08■■□□□ 1.45
SCAMP3-204ENST00000465312 BABAM1Q9NWV8 329 aa24.08■■□□□ 1.45
SCAMP3-204ENST00000465312 SNRPA1P09661 255 aaKnown RBP24.07■■□□□ 1.44
SCAMP3-204ENST00000465312 CHL1O00533 1208 aa24.06■■□□□ 1.44
SCAMP3-204ENST00000465312 STARD3NLO95772 234 aa24.06■■□□□ 1.44
SCAMP3-204ENST00000465312 CRKLP46109 303 aaKnown RBP24.06■■□□□ 1.44
SCAMP3-204ENST00000465312 NCBP3Q53F19 620 aaKnown RBP24.06■■□□□ 1.44
SCAMP3-204ENST00000465312 AKT1S1Q96B36 256 aa24.06■■□□□ 1.44
SCAMP3-204ENST00000465312 TEX13AQ9BXU3 409 aaPredicted RBP24.06■■□□□ 1.44
SCAMP3-204ENST00000465312 COL5A3P25940 1745 aaPredicted RBP24.06■■□□□ 1.44
SCAMP3-204ENST00000465312 EIF4A1P60842 406 aaKnown RBP24.05■■□□□ 1.44
SCAMP3-204ENST00000465312 HNRNPUQ00839 825 aaKnown RBP eCLIP24.05■■□□□ 1.44
SCAMP3-204ENST00000465312 MBIPQ9NS73 344 aa24.05■■□□□ 1.44
SCAMP3-204ENST00000465312 ZNF330Q9Y3S2 320 aaPredicted RBP24.04■■□□□ 1.44
SCAMP3-204ENST00000465312 CNTNAP4Q9C0A0 1308 aa24.04■■□□□ 1.44
SCAMP3-204ENST00000465312 PRAMEF22A3QJZ6 481 aa24.03■■□□□ 1.44
SCAMP3-204ENST00000465312 WDR63Q8IWG1 891 aa24.03■■□□□ 1.44
SCAMP3-204ENST00000465312 CCDC87Q9NVE4 849 aa24.03■■□□□ 1.44
SCAMP3-204ENST00000465312 RTCBQ9Y3I0 505 aaKnown RBP24.03■■□□□ 1.44
SCAMP3-204ENST00000465312 CICQ96RK0 1608 aaPredicted RBP24.02■■□□□ 1.44
SCAMP3-204ENST00000465312 CYP19A1P11511 503 aaPredicted RBP24.02■■□□□ 1.44
SCAMP3-204ENST00000465312 CANXP27824 592 aaKnown RBP24.02■■□□□ 1.44
SCAMP3-204ENST00000465312 NPM2Q86SE8 214 aaKnown RBP24.02■■□□□ 1.44
SCAMP3-204ENST00000465312 TSR2Q969E8 191 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms