RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TXNRD1Q16881 649 aa25.03■■□□□ 1.6
LMNB1-204ENST00000463908 RRP7AQ9Y3A4 280 aaKnown RBP25.03■■□□□ 1.6
LMNB1-204ENST00000463908 CEMIPQ8WUJ3 1361 aa25.03■■□□□ 1.6
LMNB1-204ENST00000463908 FAM9BQ8IZU0 186 aa25.02■■□□□ 1.6
LMNB1-204ENST00000463908 APAF1O14727 1248 aa25.01■■□□□ 1.59
LMNB1-204ENST00000463908 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
LMNB1-204ENST00000463908 NEUROD2Q15784 382 aa25■■□□□ 1.59
LMNB1-204ENST00000463908 LRRC4BQ9NT99 713 aa25■■□□□ 1.59
LMNB1-204ENST00000463908 MRC1P22897 1456 aa24.98■■□□□ 1.59
LMNB1-204ENST00000463908 KCNQ4P56696 695 aa24.98■■□□□ 1.59
LMNB1-204ENST00000463908 SMARCC1Q92922 1105 aaPredicted RBP24.98■■□□□ 1.59
LMNB1-204ENST00000463908 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
LMNB1-204ENST00000463908 TRIM35Q9UPQ4 493 aa24.98■■□□□ 1.59
LMNB1-204ENST00000463908 PALLDQ8WX93 1383 aa24.97■■□□□ 1.59
LMNB1-204ENST00000463908 PSDA5PKW4 1024 aaPredicted RBP24.97■■□□□ 1.59
LMNB1-204ENST00000463908 TEFQ10587 303 aa24.97■■□□□ 1.59
LMNB1-204ENST00000463908 SLC39A6Q13433 755 aa24.96■■□□□ 1.59
LMNB1-204ENST00000463908 DLG5Q8TDM6 1919 aa24.96■■□□□ 1.59
LMNB1-204ENST00000463908 SENP3-EIF4A1A0A087X0R7 540 aa24.95■■□□□ 1.58
LMNB1-204ENST00000463908 RGPD3A6NKT7 1758 aaPredicted RBP24.95■■□□□ 1.58
LMNB1-204ENST00000463908 RGPD4Q7Z3J3 1758 aa24.95■■□□□ 1.58
LMNB1-204ENST00000463908 VIRMAQ69YN4 1812 aaKnown RBP24.94■■□□□ 1.58
LMNB1-204ENST00000463908 SLC4A9Q96Q91 983 aa24.94■■□□□ 1.58
LMNB1-204ENST00000463908 SLC27A3Q5K4L6 730 aa24.93■■□□□ 1.58
LMNB1-204ENST00000463908 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
LMNB1-204ENST00000463908 LY75O60449 1722 aa24.92■■□□□ 1.58
LMNB1-204ENST00000463908 RREB1Q92766 1687 aa24.92■■□□□ 1.58
LMNB1-204ENST00000463908 LOC102724428A0A0B4J2F2 783 aa24.92■■□□□ 1.58
LMNB1-204ENST00000463908 SIK1P57059 783 aa24.92■■□□□ 1.58
LMNB1-204ENST00000463908 KCNQ3O43525 872 aa24.91■■□□□ 1.58
LMNB1-204ENST00000463908 TAF7Q15545 349 aaPredicted RBP24.91■■□□□ 1.58
LMNB1-204ENST00000463908 BTBD11A6QL63 1104 aa24.9■■□□□ 1.58
LMNB1-204ENST00000463908 PTCD1O75127 700 aaKnown RBP24.9■■□□□ 1.58
LMNB1-204ENST00000463908 LMOD3Q0VAK6 560 aa24.9■■□□□ 1.58
LMNB1-204ENST00000463908 MIS18AQ9NYP9 233 aa24.9■■□□□ 1.58
LMNB1-204ENST00000463908 ITPK1Q13572 414 aa24.89■■□□□ 1.58
LMNB1-204ENST00000463908 ZNF790Q6PG37 636 aa24.89■■□□□ 1.58
LMNB1-204ENST00000463908 RBM42Q9BTD8 480 aaKnown RBP24.89■■□□□ 1.58
LMNB1-204ENST00000463908 SIPA1L3O60292 1781 aaPredicted RBP24.89■■□□□ 1.57
LMNB1-204ENST00000463908 ANO8Q9HCE9 1232 aaPredicted RBP24.88■■□□□ 1.57
LMNB1-204ENST00000463908 NUP188Q5SRE5 1749 aa24.88■■□□□ 1.57
LMNB1-204ENST00000463908 ATP6V1AP38606 617 aa24.87■■□□□ 1.57
LMNB1-204ENST00000463908 NCBP3Q53F19 620 aaKnown RBP24.85■■□□□ 1.57
LMNB1-204ENST00000463908 NBPF14Q5TI25 921 aa24.85■■□□□ 1.57
LMNB1-204ENST00000463908 AKT1S1Q96B36 256 aa24.85■■□□□ 1.57
LMNB1-204ENST00000463908 ZNF496Q96IT1 587 aaPredicted RBP24.85■■□□□ 1.57
LMNB1-204ENST00000463908 PAPPAQ13219 1627 aa24.84■■□□□ 1.57
LMNB1-204ENST00000463908 LINC00116Q8NCU8 138 aa24.84■■□□□ 1.57
LMNB1-204ENST00000463908 KCPQ6ZWJ8 1503 aa24.84■■□□□ 1.57
LMNB1-204ENST00000463908 ZNF827Q17R98 1081 aa24.83■■□□□ 1.57
LMNB1-204ENST00000463908 CCDC27Q2M243 656 aa24.83■■□□□ 1.57
LMNB1-204ENST00000463908 TTC5Q8N0Z6 440 aa24.83■■□□□ 1.57
LMNB1-204ENST00000463908 SLC15A2Q16348 729 aa24.82■■□□□ 1.56
LMNB1-204ENST00000463908 WWC1Q8IX03 1113 aa24.82■■□□□ 1.56
LMNB1-204ENST00000463908 SALL2Q9Y467 1007 aaPredicted RBP24.82■■□□□ 1.56
LMNB1-204ENST00000463908 CHL1O00533 1208 aa24.81■■□□□ 1.56
LMNB1-204ENST00000463908 R3HDM1Q15032 1099 aaKnown RBP24.81■■□□□ 1.56
LMNB1-204ENST00000463908 DNAJC10Q8IXB1 793 aa24.8■■□□□ 1.56
LMNB1-204ENST00000463908 VSIG10Q8N0Z9 540 aa24.8■■□□□ 1.56
LMNB1-204ENST00000463908 STK32BQ9NY57 414 aa24.8■■□□□ 1.56
LMNB1-204ENST00000463908 ZNF853P0CG23 659 aa24.79■■□□□ 1.56
LMNB1-204ENST00000463908 FMNL2Q96PY5 1086 aa24.79■■□□□ 1.56
LMNB1-204ENST00000463908 BABAM1Q9NWV8 329 aa24.79■■□□□ 1.56
LMNB1-204ENST00000463908 TSPYL4Q9UJ04 414 aa24.78■■□□□ 1.56
LMNB1-204ENST00000463908 ZNF831Q5JPB2 1677 aa24.78■■□□□ 1.56
LMNB1-204ENST00000463908 HEG1Q9ULI3 1381 aa24.78■■□□□ 1.56
LMNB1-204ENST00000463908 UBR2Q8IWV8 1755 aa24.77■■□□□ 1.56
LMNB1-204ENST00000463908 EIF4A1P60842 406 aaKnown RBP24.77■■□□□ 1.56
LMNB1-204ENST00000463908 CFAP44Q96MT7 982 aa24.77■■□□□ 1.56
LMNB1-204ENST00000463908 LAS1LQ9Y4W2 734 aaKnown RBP24.77■■□□□ 1.56
LMNB1-204ENST00000463908 PRAMEF22A3QJZ6 481 aa24.76■■□□□ 1.55
LMNB1-204ENST00000463908 AMIGO3Q86WK7 504 aa24.76■■□□□ 1.55
LMNB1-204ENST00000463908 TAF1LQ8IZX4 1826 aa24.75■■□□□ 1.55
LMNB1-204ENST00000463908 CYP19A1P11511 503 aaPredicted RBP24.75■■□□□ 1.55
LMNB1-204ENST00000463908 HMGB2P26583 209 aaKnown RBP24.75■■□□□ 1.55
LMNB1-204ENST00000463908 SMIM5Q71RC9 77 aa24.75■■□□□ 1.55
LMNB1-204ENST00000463908 PDGFDQ9GZP0 370 aaPredicted RBP24.75■■□□□ 1.55
LMNB1-204ENST00000463908 C5P01031 1676 aa24.75■■□□□ 1.55
LMNB1-204ENST00000463908 RC3H1Q5TC82 1133 aaKnown RBP24.74■■□□□ 1.55
LMNB1-204ENST00000463908 KDM3BQ7LBC6 1761 aa24.73■■□□□ 1.55
LMNB1-204ENST00000463908 TJP1Q07157 1748 aa24.73■■□□□ 1.55
LMNB1-204ENST00000463908 CALD1Q05682 793 aaKnown RBP24.73■■□□□ 1.55
LMNB1-204ENST00000463908 INTS5Q6P9B9 1019 aaKnown RBP24.73■■□□□ 1.55
LMNB1-204ENST00000463908 NGEFQ8N5V2 710 aa24.73■■□□□ 1.55
LMNB1-204ENST00000463908 IFT57Q9NWB7 429 aa24.73■■□□□ 1.55
LMNB1-204ENST00000463908 TFCP2L1Q9NZI6 479 aa24.73■■□□□ 1.55
LMNB1-204ENST00000463908 USP16Q9Y5T5 823 aa24.73■■□□□ 1.55
LMNB1-204ENST00000463908 C4BP0C0L5 1744 aa24.72■■□□□ 1.55
LMNB1-204ENST00000463908 GIGYF1O75420 1035 aaPredicted RBP24.72■■□□□ 1.55
LMNB1-204ENST00000463908 SNRPA1P09661 255 aaKnown RBP24.72■■□□□ 1.55
LMNB1-204ENST00000463908 CRKLP46109 303 aaKnown RBP24.72■■□□□ 1.55
LMNB1-204ENST00000463908 MBIPQ9NS73 344 aa24.72■■□□□ 1.55
LMNB1-204ENST00000463908 CNTNAP4Q9C0A0 1308 aa24.71■■□□□ 1.55
LMNB1-204ENST00000463908 GNAI1P63096 354 aa24.71■■□□□ 1.55
LMNB1-204ENST00000463908 WDR63Q8IWG1 891 aa24.71■■□□□ 1.55
LMNB1-204ENST00000463908 TEX13AQ9BXU3 409 aaPredicted RBP24.71■■□□□ 1.55
LMNB1-204ENST00000463908 CICQ96RK0 1608 aaPredicted RBP24.71■■□□□ 1.55
LMNB1-204ENST00000463908 PNPLA7Q6ZV29 1317 aa24.7■■□□□ 1.54
LMNB1-204ENST00000463908 ZNF521Q96K83 1311 aa24.7■■□□□ 1.54
LMNB1-204ENST00000463908 AK7Q96M32 723 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms