RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
PTPRD-207ENST00000463477 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
PTPRD-207ENST00000463477 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
PTPRD-207ENST00000463477 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
PTPRD-207ENST00000463477 PDE3AQ14432 1141 aa12.75□□□□□ -0.37
PTPRD-207ENST00000463477 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
PTPRD-207ENST00000463477 DCAF5Q96JK2 942 aa12.75□□□□□ -0.37
PTPRD-207ENST00000463477 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
PTPRD-207ENST00000463477 AAMPQ13685 434 aa12.74□□□□□ -0.37
PTPRD-207ENST00000463477 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
PTPRD-207ENST00000463477 MPRIPQ6WCQ1 1025 aa12.74□□□□□ -0.37
PTPRD-207ENST00000463477 RGPD3A6NKT7 1758 aaPredicted RBP12.74□□□□□ -0.37
PTPRD-207ENST00000463477 RGPD4Q7Z3J3 1758 aa12.74□□□□□ -0.37
PTPRD-207ENST00000463477 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
PTPRD-207ENST00000463477 C1orf141Q5JVX7 400 aa12.73□□□□□ -0.37
PTPRD-207ENST00000463477 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
PTPRD-207ENST00000463477 PIGBQ92521 554 aa12.73□□□□□ -0.37
PTPRD-207ENST00000463477 FCHSD2O94868 740 aa12.73□□□□□ -0.37
PTPRD-207ENST00000463477 ANP32AP39687 249 aaKnown RBP12.73□□□□□ -0.37
PTPRD-207ENST00000463477 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
PTPRD-207ENST00000463477 SRCAPQ6ZRS2 3230 aa12.72□□□□□ -0.37
PTPRD-207ENST00000463477 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
PTPRD-207ENST00000463477 BACH2Q9BYV9 841 aa12.72□□□□□ -0.37
PTPRD-207ENST00000463477 LRRC4BQ9NT99 713 aa12.72□□□□□ -0.37
PTPRD-207ENST00000463477 BTAF1O14981 1849 aa12.72□□□□□ -0.37
PTPRD-207ENST00000463477 RREB1Q92766 1687 aa12.71□□□□□ -0.37
PTPRD-207ENST00000463477 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.37
PTPRD-207ENST00000463477 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
PTPRD-207ENST00000463477 U2AF1L5P0DN76 240 aaPredicted RBP12.71□□□□□ -0.37
PTPRD-207ENST00000463477 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.37
PTPRD-207ENST00000463477 U2AF1Q01081 240 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTPRD-207ENST00000463477 MTHFSDQ2M296 383 aaKnown RBP12.71□□□□□ -0.37
PTPRD-207ENST00000463477 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
PTPRD-207ENST00000463477 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
PTPRD-207ENST00000463477 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
PTPRD-207ENST00000463477 PDE4AP27815 886 aa12.7□□□□□ -0.38
PTPRD-207ENST00000463477 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
PTPRD-207ENST00000463477 DOT1LQ8TEK3 1739 aa12.7□□□□□ -0.38
PTPRD-207ENST00000463477 SLC15A2Q16348 729 aa12.7□□□□□ -0.38
PTPRD-207ENST00000463477 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
PTPRD-207ENST00000463477 MYH16Q9H6N6 1097 aa12.7□□□□□ -0.38
PTPRD-207ENST00000463477 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
PTPRD-207ENST00000463477 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
PTPRD-207ENST00000463477 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
PTPRD-207ENST00000463477 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
PTPRD-207ENST00000463477 IL16Q14005 1332 aa12.69□□□□□ -0.38
PTPRD-207ENST00000463477 KDM6AO15550 1401 aaPredicted RBP12.68□□□□□ -0.38
PTPRD-207ENST00000463477 BCAR3O75815 825 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 CABP4P57796 275 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 STK32BQ9NY57 414 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
PTPRD-207ENST00000463477 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 NOP58Q9Y2X3 529 aaKnown RBP12.68□□□□□ -0.38
PTPRD-207ENST00000463477 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
PTPRD-207ENST00000463477 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
PTPRD-207ENST00000463477 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
PTPRD-207ENST00000463477 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
PTPRD-207ENST00000463477 KCNQ4P56696 695 aa12.67□□□□□ -0.38
PTPRD-207ENST00000463477 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
PTPRD-207ENST00000463477 TOGARAM1Q9Y4F4 1720 aa12.66□□□□□ -0.38
PTPRD-207ENST00000463477 ITGB4P16144 1822 aa12.66□□□□□ -0.38
PTPRD-207ENST00000463477 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
PTPRD-207ENST00000463477 SLC52A2Q9HAB3 445 aa12.66□□□□□ -0.38
PTPRD-207ENST00000463477 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
PTPRD-207ENST00000463477 SIK1P57059 783 aa12.65□□□□□ -0.38
PTPRD-207ENST00000463477 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
PTPRD-207ENST00000463477 IL17REQ8NFR9 667 aa12.64□□□□□ -0.39
PTPRD-207ENST00000463477 LY75O60449 1722 aa12.64□□□□□ -0.39
PTPRD-207ENST00000463477 NEFMP07197 916 aa12.64□□□□□ -0.39
PTPRD-207ENST00000463477 ZNF827Q17R98 1081 aa12.64□□□□□ -0.39
PTPRD-207ENST00000463477 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
PTPRD-207ENST00000463477 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
PTPRD-207ENST00000463477 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
PTPRD-207ENST00000463477 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
PTPRD-207ENST00000463477 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
PTPRD-207ENST00000463477 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
PTPRD-207ENST00000463477 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
PTPRD-207ENST00000463477 TFCP2L1Q9NZI6 479 aa12.62□□□□□ -0.39
PTPRD-207ENST00000463477 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
PTPRD-207ENST00000463477 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
PTPRD-207ENST00000463477 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
PTPRD-207ENST00000463477 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
PTPRD-207ENST00000463477 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
PTPRD-207ENST00000463477 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
PTPRD-207ENST00000463477 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
PTPRD-207ENST00000463477 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
PTPRD-207ENST00000463477 SLC16A10Q8TF71 515 aa12.61□□□□□ -0.39
PTPRD-207ENST00000463477 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
PTPRD-207ENST00000463477 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
PTPRD-207ENST00000463477 SPON1Q9HCB6 807 aa12.61□□□□□ -0.39
PTPRD-207ENST00000463477 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
PTPRD-207ENST00000463477 ADRA2BP18089 450 aa12.6□□□□□ -0.39
PTPRD-207ENST00000463477 TEFQ10587 303 aa12.6□□□□□ -0.39
PTPRD-207ENST00000463477 ITPK1Q13572 414 aa12.6□□□□□ -0.39
PTPRD-207ENST00000463477 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms