RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
MSH5-211ENST00000463144 RNMTO43148 476 aaKnown RBP12.78□□□□□ -0.36
MSH5-211ENST00000463144 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
MSH5-211ENST00000463144 ANKRD44Q8N8A2 993 aa12.78□□□□□ -0.36
MSH5-211ENST00000463144 FLIIQ13045 1269 aa12.77□□□□□ -0.36
MSH5-211ENST00000463144 BRINP3Q76B58 766 aa12.77□□□□□ -0.36
MSH5-211ENST00000463144 DDRGK1Q96HY6 314 aa12.77□□□□□ -0.36
MSH5-211ENST00000463144 ZNF335Q9H4Z2 1342 aaPredicted RBP12.77□□□□□ -0.37
MSH5-211ENST00000463144 SLC4A10Q6U841 1118 aa12.77□□□□□ -0.37
MSH5-211ENST00000463144 CEP85Q6P2H3 762 aa12.76□□□□□ -0.37
MSH5-211ENST00000463144 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
MSH5-211ENST00000463144 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
MSH5-211ENST00000463144 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
MSH5-211ENST00000463144 ADAMTS7Q9UKP4 1686 aa12.76□□□□□ -0.37
MSH5-211ENST00000463144 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
MSH5-211ENST00000463144 BTBD11A6QL63 1104 aa12.75□□□□□ -0.37
MSH5-211ENST00000463144 TEFQ10587 303 aa12.75□□□□□ -0.37
MSH5-211ENST00000463144 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
MSH5-211ENST00000463144 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
MSH5-211ENST00000463144 RPAP2Q8IXW5 612 aaPredicted RBP12.75□□□□□ -0.37
MSH5-211ENST00000463144 OVOS2A0A0G2JMS6 1433 aa12.75□□□□□ -0.37
MSH5-211ENST00000463144 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
MSH5-211ENST00000463144 PHAXQ9H814 394 aaKnown RBP12.74□□□□□ -0.37
MSH5-211ENST00000463144 NLRP2Q9NX02 1062 aa12.74□□□□□ -0.37
MSH5-211ENST00000463144 SLC4A3P48751 1232 aa12.74□□□□□ -0.37
MSH5-211ENST00000463144 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
MSH5-211ENST00000463144 SLAIN2Q9P270 581 aa12.73□□□□□ -0.37
MSH5-211ENST00000463144 HOXB7P09629 217 aa12.73□□□□□ -0.37
MSH5-211ENST00000463144 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
MSH5-211ENST00000463144 CPDO75976 1380 aa12.72□□□□□ -0.37
MSH5-211ENST00000463144 MEGF6O75095 1541 aa12.72□□□□□ -0.37
MSH5-211ENST00000463144 ABCC6O95255 1503 aa12.72□□□□□ -0.37
MSH5-211ENST00000463144 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
MSH5-211ENST00000463144 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
MSH5-211ENST00000463144 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
MSH5-211ENST00000463144 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
MSH5-211ENST00000463144 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
MSH5-211ENST00000463144 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.37
MSH5-211ENST00000463144 LTBP4Q8N2S1 1624 aa12.71□□□□□ -0.38
MSH5-211ENST00000463144 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.38
MSH5-211ENST00000463144 C16orf71Q8IYS4 520 aaPredicted RBP12.71□□□□□ -0.38
MSH5-211ENST00000463144 PXDNLA1KZ92 1463 aa12.7□□□□□ -0.38
MSH5-211ENST00000463144 KDM6AO15550 1401 aaPredicted RBP12.7□□□□□ -0.38
MSH5-211ENST00000463144 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
MSH5-211ENST00000463144 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
MSH5-211ENST00000463144 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
MSH5-211ENST00000463144 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
MSH5-211ENST00000463144 ANXA1P04083 346 aa12.69□□□□□ -0.38
MSH5-211ENST00000463144 GNAI2P04899 355 aa12.69□□□□□ -0.38
MSH5-211ENST00000463144 PHKG2P15735 406 aa12.69□□□□□ -0.38
MSH5-211ENST00000463144 PLEKHM2Q8IWE5 1019 aa12.69□□□□□ -0.38
MSH5-211ENST00000463144 USP44Q9H0E7 712 aa12.69□□□□□ -0.38
MSH5-211ENST00000463144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.383e-7■■■□□ 15
MSH5-211ENST00000463144 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
MSH5-211ENST00000463144 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
MSH5-211ENST00000463144 SMARCA5O60264 1052 aaPredicted RBP12.68□□□□□ -0.38
MSH5-211ENST00000463144 GNAI3P08754 354 aa12.68□□□□□ -0.38
MSH5-211ENST00000463144 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
MSH5-211ENST00000463144 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
MSH5-211ENST00000463144 CYP27B1O15528 508 aa12.67□□□□□ -0.38
MSH5-211ENST00000463144 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
MSH5-211ENST00000463144 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
MSH5-211ENST00000463144 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
MSH5-211ENST00000463144 PNMA6EA0A0J9YXQ4 647 aa12.67□□□□□ -0.38
MSH5-211ENST00000463144 GSPT1P15170 499 aaKnown RBP12.67□□□□□ -0.38
MSH5-211ENST00000463144 SLC39A6Q13433 755 aa12.67□□□□□ -0.38
MSH5-211ENST00000463144 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
MSH5-211ENST00000463144 PI4KAP2A4QPH2 592 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 APBB1O00213 710 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 HMMRO75330 724 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 NBR1Q14596 966 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 PI4KAP1Q8N8J0 262 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
MSH5-211ENST00000463144 LRRFIP2Q9Y608 721 aaKnown RBP12.66□□□□□ -0.38
MSH5-211ENST00000463144 ADCY9O60503 1353 aa12.66□□□□□ -0.38
MSH5-211ENST00000463144 BEND3Q5T5X7 828 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 SRCIN1Q9C0H9 1055 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
MSH5-211ENST00000463144 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 C5P01031 1676 aa12.65□□□□□ -0.38
MSH5-211ENST00000463144 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
MSH5-211ENST00000463144 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
MSH5-211ENST00000463144 TBC1D9Q6ZT07 1266 aa12.64□□□□□ -0.39
MSH5-211ENST00000463144 EXOC6BQ9Y2D4 811 aa12.64□□□□□ -0.39
MSH5-211ENST00000463144 COL5A2P05997 1499 aaPredicted RBP12.63□□□□□ -0.39
MSH5-211ENST00000463144 MRC1P22897 1456 aa12.63□□□□□ -0.39
MSH5-211ENST00000463144 NBPF7P0C2Y1 421 aaPredicted RBP12.63□□□□□ -0.39
MSH5-211ENST00000463144 UBTFL1P0CB47 393 aaPredicted RBP12.63□□□□□ -0.39
MSH5-211ENST00000463144 PDIA6Q15084 440 aa12.63□□□□□ -0.39
MSH5-211ENST00000463144 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms