RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 SLC27A3Q5K4L6 730 aa15.39■□□□□ 0.05
TRAF3IP1-204ENST00000462122 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
TRAF3IP1-204ENST00000462122 LMOD3Q0VAK6 560 aa15.38■□□□□ 0.05
TRAF3IP1-204ENST00000462122 TEFQ10587 303 aa15.38■□□□□ 0.05
TRAF3IP1-204ENST00000462122 NFATC2IPQ8NCF5 419 aa15.38■□□□□ 0.05
TRAF3IP1-204ENST00000462122 IL17REQ8NFR9 667 aa15.38■□□□□ 0.05
TRAF3IP1-204ENST00000462122 HMGB2P26583 209 aaKnown RBP15.37■□□□□ 0.05
TRAF3IP1-204ENST00000462122 TMPOP42166 694 aaKnown RBP15.37■□□□□ 0.05
TRAF3IP1-204ENST00000462122 RIPK4P57078 832 aa15.36■□□□□ 0.05
TRAF3IP1-204ENST00000462122 PROM2Q8N271 834 aa15.36■□□□□ 0.05
TRAF3IP1-204ENST00000462122 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
TRAF3IP1-204ENST00000462122 LY75O60449 1722 aa15.35■□□□□ 0.05
TRAF3IP1-204ENST00000462122 MCM10Q7L590 875 aa15.35■□□□□ 0.05
TRAF3IP1-204ENST00000462122 CCNL1Q9UK58 526 aaPredicted RBP15.35■□□□□ 0.05
TRAF3IP1-204ENST00000462122 ASAP1Q9ULH1 1129 aa15.35■□□□□ 0.05
TRAF3IP1-204ENST00000462122 NUP188Q5SRE5 1749 aa15.34■□□□□ 0.05
TRAF3IP1-204ENST00000462122 NBPF14Q5TI25 921 aa15.34■□□□□ 0.05
TRAF3IP1-204ENST00000462122 VIRMAQ69YN4 1812 aaKnown RBP15.33■□□□□ 0.05
TRAF3IP1-204ENST00000462122 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
TRAF3IP1-204ENST00000462122 SIK1P57059 783 aa15.33■□□□□ 0.04
TRAF3IP1-204ENST00000462122 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
TRAF3IP1-204ENST00000462122 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
TRAF3IP1-204ENST00000462122 RRP7AQ9Y3A4 280 aaKnown RBP15.33■□□□□ 0.04
TRAF3IP1-204ENST00000462122 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.04
TRAF3IP1-204ENST00000462122 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
TRAF3IP1-204ENST00000462122 APAF1O14727 1248 aa15.32■□□□□ 0.04
TRAF3IP1-204ENST00000462122 TTC5Q8N0Z6 440 aa15.32■□□□□ 0.04
TRAF3IP1-204ENST00000462122 LRRC4BQ9NT99 713 aa15.32■□□□□ 0.04
TRAF3IP1-204ENST00000462122 SIPA1L3O60292 1781 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP1-204ENST00000462122 BTBD11A6QL63 1104 aa15.31■□□□□ 0.04
TRAF3IP1-204ENST00000462122 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP1-204ENST00000462122 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
TRAF3IP1-204ENST00000462122 MIER1Q8N108 512 aa15.31■□□□□ 0.04
TRAF3IP1-204ENST00000462122 ATP6V1AP38606 617 aa15.3■□□□□ 0.04
TRAF3IP1-204ENST00000462122 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
TRAF3IP1-204ENST00000462122 ZNF790Q6PG37 636 aa15.3■□□□□ 0.04
TRAF3IP1-204ENST00000462122 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
TRAF3IP1-204ENST00000462122 STK32BQ9NY57 414 aa15.3■□□□□ 0.04
TRAF3IP1-204ENST00000462122 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
TRAF3IP1-204ENST00000462122 ZNF831Q5JPB2 1677 aa15.29■□□□□ 0.04
TRAF3IP1-204ENST00000462122 PTCD1O75127 700 aaKnown RBP15.29■□□□□ 0.04
TRAF3IP1-204ENST00000462122 SLC39A6Q13433 755 aa15.29■□□□□ 0.04
TRAF3IP1-204ENST00000462122 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
TRAF3IP1-204ENST00000462122 CALD1Q05682 793 aaKnown RBP15.28■□□□□ 0.04
TRAF3IP1-204ENST00000462122 THUMPD2Q9BTF0 503 aaKnown RBP15.28■□□□□ 0.04
TRAF3IP1-204ENST00000462122 ANO8Q9HCE9 1232 aaPredicted RBP15.28■□□□□ 0.04
TRAF3IP1-204ENST00000462122 BABAM1Q9NWV8 329 aa15.28■□□□□ 0.04
TRAF3IP1-204ENST00000462122 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
TRAF3IP1-204ENST00000462122 KCNQ4P56696 695 aa15.27■□□□□ 0.04
TRAF3IP1-204ENST00000462122 SLC15A2Q16348 729 aa15.27■□□□□ 0.04
TRAF3IP1-204ENST00000462122 CCDC27Q2M243 656 aa15.27■□□□□ 0.04
TRAF3IP1-204ENST00000462122 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
TRAF3IP1-204ENST00000462122 NGEFQ8N5V2 710 aa15.27■□□□□ 0.04
TRAF3IP1-204ENST00000462122 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
TRAF3IP1-204ENST00000462122 C5P01031 1676 aa15.27■□□□□ 0.03
TRAF3IP1-204ENST00000462122 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
TRAF3IP1-204ENST00000462122 ITPK1Q13572 414 aa15.26■□□□□ 0.03
TRAF3IP1-204ENST00000462122 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
TRAF3IP1-204ENST00000462122 FMNL2Q96PY5 1086 aa15.26■□□□□ 0.03
TRAF3IP1-204ENST00000462122 R3HDM1Q15032 1099 aaKnown RBP15.25■□□□□ 0.03
TRAF3IP1-204ENST00000462122 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
TRAF3IP1-204ENST00000462122 LINC00116Q8NCU8 138 aa15.25■□□□□ 0.03
TRAF3IP1-204ENST00000462122 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
TRAF3IP1-204ENST00000462122 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
TRAF3IP1-204ENST00000462122 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
TRAF3IP1-204ENST00000462122 AK7Q96M32 723 aa15.24■□□□□ 0.03
TRAF3IP1-204ENST00000462122 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
TRAF3IP1-204ENST00000462122 TAF1LQ8IZX4 1826 aa15.24■□□□□ 0.03
TRAF3IP1-204ENST00000462122 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
TRAF3IP1-204ENST00000462122 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
TRAF3IP1-204ENST00000462122 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
TRAF3IP1-204ENST00000462122 MIS18AQ9NYP9 233 aa15.23■□□□□ 0.03
TRAF3IP1-204ENST00000462122 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
TRAF3IP1-204ENST00000462122 COL5A3P25940 1745 aaPredicted RBP15.23■□□□□ 0.03
TRAF3IP1-204ENST00000462122 TJP1Q07157 1748 aa15.23■□□□□ 0.03
TRAF3IP1-204ENST00000462122 KDM3BQ7LBC6 1761 aa15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 PSDA5PKW4 1024 aaPredicted RBP15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 CHL1O00533 1208 aa15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 KCNQ3O43525 872 aa15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 WWC1Q8IX03 1113 aa15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 DNAJC10Q8IXB1 793 aa15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 CFAP44Q96MT7 982 aa15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 IFT57Q9NWB7 429 aa15.22■□□□□ 0.03
TRAF3IP1-204ENST00000462122 STARD3NLO95772 234 aa15.21■□□□□ 0.03
TRAF3IP1-204ENST00000462122 GNAI1P63096 354 aa15.21■□□□□ 0.03
TRAF3IP1-204ENST00000462122 FLAD1Q8NFF5 587 aa15.21■□□□□ 0.03
TRAF3IP1-204ENST00000462122 QSER1Q2KHR3 1735 aa15.2■□□□□ 0.02
TRAF3IP1-204ENST00000462122 SNRPA1P09661 255 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP1-204ENST00000462122 CYP19A1P11511 503 aaPredicted RBP15.2■□□□□ 0.02
TRAF3IP1-204ENST00000462122 SSFA2P28290 1259 aa15.2■□□□□ 0.02
TRAF3IP1-204ENST00000462122 CRKLP46109 303 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP1-204ENST00000462122 EIF4A1P60842 406 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP1-204ENST00000462122 LAS1LQ9Y4W2 734 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP1-204ENST00000462122 IL16Q14005 1332 aa15.19■□□□□ 0.02
TRAF3IP1-204ENST00000462122 PNPLA7Q6ZV29 1317 aa15.19■□□□□ 0.02
TRAF3IP1-204ENST00000462122 GNPATO15228 680 aa15.19■□□□□ 0.02
TRAF3IP1-204ENST00000462122 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
TRAF3IP1-204ENST00000462122 RTCBQ9Y3I0 505 aaKnown RBP15.19■□□□□ 0.02
TRAF3IP1-204ENST00000462122 SENP3-EIF4A1A0A087X0R7 540 aa15.18■□□□□ 0.02
TRAF3IP1-204ENST00000462122 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms