RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 DAXXQ9UER7 740 aaPredicted RBP14.63□□□□□ -0.07
APTX-209ENST00000460940 ADAMTS8Q9UP79 889 aa14.63□□□□□ -0.07
APTX-209ENST00000460940 LY75O60449 1722 aa14.63□□□□□ -0.07
APTX-209ENST00000460940 CEMIPQ8WUJ3 1361 aa14.63□□□□□ -0.07
APTX-209ENST00000460940 HMGB2P26583 209 aaKnown RBP14.63□□□□□ -0.07
APTX-209ENST00000460940 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
APTX-209ENST00000460940 RUNDC1Q96C34 613 aa14.63□□□□□ -0.07
APTX-209ENST00000460940 SLC52A2Q9HAB3 445 aa14.63□□□□□ -0.07
APTX-209ENST00000460940 CCDC184Q52MB2 194 aa14.62□□□□□ -0.07
APTX-209ENST00000460940 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
APTX-209ENST00000460940 LGR6Q9HBX8 967 aa14.61□□□□□ -0.07
APTX-209ENST00000460940 PROM2Q8N271 834 aa14.61□□□□□ -0.07
APTX-209ENST00000460940 NFATC2IPQ8NCF5 419 aa14.61□□□□□ -0.07
APTX-209ENST00000460940 IL17REQ8NFR9 667 aa14.61□□□□□ -0.07
APTX-209ENST00000460940 VIRMAQ69YN4 1812 aaKnown RBP14.6□□□□□ -0.07
APTX-209ENST00000460940 PAPPAQ13219 1627 aa14.6□□□□□ -0.07
APTX-209ENST00000460940 TEFQ10587 303 aa14.6□□□□□ -0.07
APTX-209ENST00000460940 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
APTX-209ENST00000460940 NBPF14Q5TI25 921 aa14.59□□□□□ -0.07
APTX-209ENST00000460940 CCDC146Q8IYE0 955 aa14.59□□□□□ -0.07
APTX-209ENST00000460940 ATG3Q9NT62 314 aa14.59□□□□□ -0.07
APTX-209ENST00000460940 CCNL1Q9UK58 526 aaPredicted RBP14.59□□□□□ -0.07
APTX-209ENST00000460940 ASAP1Q9ULH1 1129 aa14.59□□□□□ -0.07
APTX-209ENST00000460940 ZNF831Q5JPB2 1677 aa14.58□□□□□ -0.08
APTX-209ENST00000460940 SIPA1L3O60292 1781 aaPredicted RBP14.58□□□□□ -0.08
APTX-209ENST00000460940 CCER2I3L3R5 266 aa14.58□□□□□ -0.08
APTX-209ENST00000460940 TMPOP42166 694 aaKnown RBP14.58□□□□□ -0.08
APTX-209ENST00000460940 DLG5Q8TDM6 1919 aa14.57□□□□□ -0.08
APTX-209ENST00000460940 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
APTX-209ENST00000460940 SIK1P57059 783 aa14.57□□□□□ -0.08
APTX-209ENST00000460940 RIPK4P57078 832 aa14.57□□□□□ -0.08
APTX-209ENST00000460940 MCM10Q7L590 875 aa14.57□□□□□ -0.08
APTX-209ENST00000460940 LRRC4BQ9NT99 713 aa14.57□□□□□ -0.08
APTX-209ENST00000460940 CICQ96RK0 1608 aaPredicted RBP14.56□□□□□ -0.08
APTX-209ENST00000460940 STK32BQ9NY57 414 aa14.56□□□□□ -0.08
APTX-209ENST00000460940 C5P01031 1676 aa14.56□□□□□ -0.08
APTX-209ENST00000460940 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
APTX-209ENST00000460940 KCPQ6ZWJ8 1503 aa14.54□□□□□ -0.08
APTX-209ENST00000460940 UBR2Q8IWV8 1755 aa14.54□□□□□ -0.08
APTX-209ENST00000460940 DCTN1Q14203 1278 aa14.54□□□□□ -0.08
APTX-209ENST00000460940 TTC5Q8N0Z6 440 aa14.54□□□□□ -0.08
APTX-209ENST00000460940 BTBD11A6QL63 1104 aa14.53□□□□□ -0.08
APTX-209ENST00000460940 RRP7AQ9Y3A4 280 aaKnown RBP14.53□□□□□ -0.08
APTX-209ENST00000460940 APAF1O14727 1248 aa14.52□□□□□ -0.08
APTX-209ENST00000460940 ATP6V1AP38606 617 aa14.52□□□□□ -0.08
APTX-209ENST00000460940 TAF7Q15545 349 aaPredicted RBP14.52□□□□□ -0.08
APTX-209ENST00000460940 SLC15A2Q16348 729 aa14.52□□□□□ -0.08
APTX-209ENST00000460940 ZNF790Q6PG37 636 aa14.52□□□□□ -0.08
APTX-209ENST00000460940 AKT1S1Q96B36 256 aa14.52□□□□□ -0.08
APTX-209ENST00000460940 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.08
APTX-209ENST00000460940 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.08
APTX-209ENST00000460940 PTCD1O75127 700 aaKnown RBP14.52□□□□□ -0.09
APTX-209ENST00000460940 SLC39A6Q13433 755 aa14.52□□□□□ -0.09
APTX-209ENST00000460940 R3HDM1Q15032 1099 aaKnown RBP14.52□□□□□ -0.09
APTX-209ENST00000460940 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
APTX-209ENST00000460940 VSIG10Q8N0Z9 540 aa14.52□□□□□ -0.09
APTX-209ENST00000460940 C4BP0C0L5 1744 aa14.52□□□□□ -0.09
APTX-209ENST00000460940 KCNQ4P56696 695 aa14.51□□□□□ -0.09
APTX-209ENST00000460940 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
APTX-209ENST00000460940 ZNF827Q17R98 1081 aa14.51□□□□□ -0.09
APTX-209ENST00000460940 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
APTX-209ENST00000460940 QSER1Q2KHR3 1735 aa14.51□□□□□ -0.09
APTX-209ENST00000460940 ITPK1Q13572 414 aa14.5□□□□□ -0.09
APTX-209ENST00000460940 FAM9BQ8IZU0 186 aa14.5□□□□□ -0.09
APTX-209ENST00000460940 SLC4A9Q96Q91 983 aa14.5□□□□□ -0.09
APTX-209ENST00000460940 BABAM1Q9NWV8 329 aa14.5□□□□□ -0.09
APTX-209ENST00000460940 COL5A3P25940 1745 aaPredicted RBP14.5□□□□□ -0.09
APTX-209ENST00000460940 TJP1Q07157 1748 aa14.5□□□□□ -0.09
APTX-209ENST00000460940 LINC00116Q8NCU8 138 aa14.5□□□□□ -0.09
APTX-209ENST00000460940 FMNL2Q96PY5 1086 aa14.5□□□□□ -0.09
APTX-209ENST00000460940 THUMPD2Q9BTF0 503 aaKnown RBP14.5□□□□□ -0.09
APTX-209ENST00000460940 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
APTX-209ENST00000460940 KDM3BQ7LBC6 1761 aa14.49□□□□□ -0.09
APTX-209ENST00000460940 PSDA5PKW4 1024 aaPredicted RBP14.49□□□□□ -0.09
APTX-209ENST00000460940 CALD1Q05682 793 aaKnown RBP14.49□□□□□ -0.09
APTX-209ENST00000460940 CCDC27Q2M243 656 aa14.49□□□□□ -0.09
APTX-209ENST00000460940 AK7Q96M32 723 aa14.49□□□□□ -0.09
APTX-209ENST00000460940 HEG1Q9ULI3 1381 aa14.49□□□□□ -0.09
APTX-209ENST00000460940 NGEFQ8N5V2 710 aa14.48□□□□□ -0.09
APTX-209ENST00000460940 ZNF496Q96IT1 587 aaPredicted RBP14.48□□□□□ -0.09
APTX-209ENST00000460940 TFCP2L1Q9NZI6 479 aa14.48□□□□□ -0.09
APTX-209ENST00000460940 RC3H1Q5TC82 1133 aaKnown RBP14.48□□□□□ -0.09
APTX-209ENST00000460940 CASZ1Q86V15 1759 aa14.47□□□□□ -0.09
APTX-209ENST00000460940 FLAD1Q8NFF5 587 aa14.47□□□□□ -0.09
APTX-209ENST00000460940 TEX13AQ9BXU3 409 aaPredicted RBP14.47□□□□□ -0.09
APTX-209ENST00000460940 DNAJC10Q8IXB1 793 aa14.46□□□□□ -0.1
APTX-209ENST00000460940 TSPYL4Q9UJ04 414 aa14.46□□□□□ -0.1
APTX-209ENST00000460940 TUBGCP6Q96RT7 1819 aa14.46□□□□□ -0.1
APTX-209ENST00000460940 PNPLA7Q6ZV29 1317 aa14.45□□□□□ -0.1
APTX-209ENST00000460940 KCNQ3O43525 872 aa14.45□□□□□ -0.1
APTX-209ENST00000460940 STARD3NLO95772 234 aa14.45□□□□□ -0.1
APTX-209ENST00000460940 SSFA2P28290 1259 aa14.45□□□□□ -0.1
APTX-209ENST00000460940 UBR3Q6ZT12 1888 aa14.45□□□□□ -0.1
APTX-209ENST00000460940 GNPATO15228 680 aa14.44□□□□□ -0.1
APTX-209ENST00000460940 SNRPA1P09661 255 aaKnown RBP14.44□□□□□ -0.1
APTX-209ENST00000460940 CYP19A1P11511 503 aaPredicted RBP14.44□□□□□ -0.1
APTX-209ENST00000460940 CRKLP46109 303 aaKnown RBP14.44□□□□□ -0.1
APTX-209ENST00000460940 MIS18AQ9NYP9 233 aa14.44□□□□□ -0.1
APTX-209ENST00000460940 CHL1O00533 1208 aa14.44□□□□□ -0.1
APTX-209ENST00000460940 ADRA2BP18089 450 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms