RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 RTF1Q92541 710 aaKnown RBP28.41■■■□□ 2.14
ABCD4-202ENST00000460308 RBM42Q9BTD8 480 aaKnown RBP28.41■■■□□ 2.14
ABCD4-202ENST00000460308 VIRMAQ69YN4 1812 aaKnown RBP28.41■■■□□ 2.14
ABCD4-202ENST00000460308 MAPK8IP3Q9UPT6 1336 aa28.41■■■□□ 2.14
ABCD4-202ENST00000460308 ATP6V1AP38606 617 aa28.39■■■□□ 2.14
ABCD4-202ENST00000460308 TEFQ10587 303 aa28.39■■■□□ 2.14
ABCD4-202ENST00000460308 ZNF827Q17R98 1081 aa28.39■■■□□ 2.14
ABCD4-202ENST00000460308 IL17REQ8NFR9 667 aa28.39■■■□□ 2.14
ABCD4-202ENST00000460308 AKT1S1Q96B36 256 aa28.39■■■□□ 2.14
ABCD4-202ENST00000460308 TFCP2L1Q9NZI6 479 aa28.39■■■□□ 2.14
ABCD4-202ENST00000460308 PLEKHF1Q96S99 279 aa28.38■■■□□ 2.13
ABCD4-202ENST00000460308 PAPPAQ13219 1627 aa28.38■■■□□ 2.13
ABCD4-202ENST00000460308 PTCD1O75127 700 aaKnown RBP28.35■■■□□ 2.13
ABCD4-202ENST00000460308 HTATSF1O43719 755 aaKnown RBP28.34■■■□□ 2.13
ABCD4-202ENST00000460308 ADAMTS7Q9UKP4 1686 aa28.33■■■□□ 2.13
ABCD4-202ENST00000460308 MRC1P22897 1456 aa28.33■■■□□ 2.13
ABCD4-202ENST00000460308 C5P01031 1676 aa28.32■■■□□ 2.12
ABCD4-202ENST00000460308 SLC39A6Q13433 755 aa28.32■■■□□ 2.12
ABCD4-202ENST00000460308 NFE2L2Q16236 605 aa28.32■■■□□ 2.12
ABCD4-202ENST00000460308 AK7Q96M32 723 aa28.32■■■□□ 2.12
ABCD4-202ENST00000460308 TAF1LQ8IZX4 1826 aa28.32■■■□□ 2.12
ABCD4-202ENST00000460308 MCM10Q7L590 875 aa28.31■■■□□ 2.12
ABCD4-202ENST00000460308 PDGFDQ9GZP0 370 aaPredicted RBP28.31■■■□□ 2.12
ABCD4-202ENST00000460308 ADAMTS8Q9UP79 889 aa28.31■■■□□ 2.12
ABCD4-202ENST00000460308 ITPK1Q13572 414 aa28.3■■■□□ 2.12
ABCD4-202ENST00000460308 TTC5Q8N0Z6 440 aa28.3■■■□□ 2.12
ABCD4-202ENST00000460308 CEMIPQ8WUJ3 1361 aa28.29■■■□□ 2.12
ABCD4-202ENST00000460308 CCDC146Q8IYE0 955 aa28.29■■■□□ 2.12
ABCD4-202ENST00000460308 LINC00116Q8NCU8 138 aa28.29■■■□□ 2.12
ABCD4-202ENST00000460308 SPON1Q9HCB6 807 aa28.29■■■□□ 2.12
ABCD4-202ENST00000460308 MSH5O43196 834 aa28.28■■■□□ 2.12
ABCD4-202ENST00000460308 DCTN1Q14203 1278 aa28.28■■■□□ 2.12
ABCD4-202ENST00000460308 SLC4A9Q96Q91 983 aa28.28■■■□□ 2.12
ABCD4-202ENST00000460308 PNPLA7Q6ZV29 1317 aa28.27■■■□□ 2.12
ABCD4-202ENST00000460308 ZBTB7AO95365 584 aa28.27■■■□□ 2.12
ABCD4-202ENST00000460308 RUNDC1Q96C34 613 aa28.27■■■□□ 2.12
ABCD4-202ENST00000460308 C4BP0C0L5 1744 aa28.26■■■□□ 2.12
ABCD4-202ENST00000460308 BTBD11A6QL63 1104 aa28.26■■■□□ 2.11
ABCD4-202ENST00000460308 FLAD1Q8NFF5 587 aa28.26■■■□□ 2.11
ABCD4-202ENST00000460308 CASZ1Q86V15 1759 aa28.25■■■□□ 2.11
ABCD4-202ENST00000460308 RIPK4P57078 832 aa28.25■■■□□ 2.11
ABCD4-202ENST00000460308 DLG5Q8TDM6 1919 aa28.25■■■□□ 2.11
ABCD4-202ENST00000460308 MRS2Q9HD23 443 aa28.24■■■□□ 2.11
ABCD4-202ENST00000460308 ATF5Q9Y2D1 282 aaPredicted RBP28.24■■■□□ 2.11
ABCD4-202ENST00000460308 QSER1Q2KHR3 1735 aa28.23■■■□□ 2.11
ABCD4-202ENST00000460308 ZNF831Q5JPB2 1677 aa28.23■■■□□ 2.11
ABCD4-202ENST00000460308 TMPOP42166 694 aaKnown RBP28.23■■■□□ 2.11
ABCD4-202ENST00000460308 CCDC184Q52MB2 194 aa28.23■■■□□ 2.11
ABCD4-202ENST00000460308 ZNF790Q6PG37 636 aa28.23■■■□□ 2.11
ABCD4-202ENST00000460308 SLC16A10Q8TF71 515 aa28.23■■■□□ 2.11
ABCD4-202ENST00000460308 MTFR1LQ9H019 292 aa28.23■■■□□ 2.11
ABCD4-202ENST00000460308 GNPATO15228 680 aa28.22■■■□□ 2.11
ABCD4-202ENST00000460308 COL23A1Q86Y22 540 aaPredicted RBP28.22■■■□□ 2.11
ABCD4-202ENST00000460308 LRP5O75197 1615 aa28.21■■■□□ 2.11
ABCD4-202ENST00000460308 TUBGCP6Q96RT7 1819 aa28.21■■■□□ 2.11
ABCD4-202ENST00000460308 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
ABCD4-202ENST00000460308 TAF7Q15545 349 aaPredicted RBP28.21■■■□□ 2.11
ABCD4-202ENST00000460308 SIPA1L3O60292 1781 aaPredicted RBP28.21■■■□□ 2.11
ABCD4-202ENST00000460308 PHF14O94880 888 aa28.2■■■□□ 2.1
ABCD4-202ENST00000460308 NEUROD2Q15784 382 aa28.2■■■□□ 2.1
ABCD4-202ENST00000460308 RC3H1Q5TC82 1133 aaKnown RBP28.2■■■□□ 2.1
ABCD4-202ENST00000460308 SSFA2P28290 1259 aa28.19■■■□□ 2.1
ABCD4-202ENST00000460308 DNAJC10Q8IXB1 793 aa28.19■■■□□ 2.1
ABCD4-202ENST00000460308 VSIG10Q8N0Z9 540 aa28.19■■■□□ 2.1
ABCD4-202ENST00000460308 PPP1R1BQ9UD71 204 aaPredicted RBP28.19■■■□□ 2.1
ABCD4-202ENST00000460308 RRP7AQ9Y3A4 280 aaKnown RBP28.19■■■□□ 2.1
ABCD4-202ENST00000460308 RTCBQ9Y3I0 505 aaKnown RBP28.19■■■□□ 2.1
ABCD4-202ENST00000460308 CNTNAP4Q9C0A0 1308 aa28.18■■■□□ 2.1
ABCD4-202ENST00000460308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.18■■■□□ 2.1
ABCD4-202ENST00000460308 FMNL2Q96PY5 1086 aa28.18■■■□□ 2.1
ABCD4-202ENST00000460308 ZNF496Q96IT1 587 aaPredicted RBP28.17■■■□□ 2.1
ABCD4-202ENST00000460308 THUMPD2Q9BTF0 503 aaKnown RBP28.17■■■□□ 2.1
ABCD4-202ENST00000460308 KCPQ6ZWJ8 1503 aa28.17■■■□□ 2.1
ABCD4-202ENST00000460308 CRKLP46109 303 aaKnown RBP28.16■■■□□ 2.1
ABCD4-202ENST00000460308 PNISRQ8TF01 805 aaKnown RBP28.16■■■□□ 2.1
ABCD4-202ENST00000460308 COL5A3P25940 1745 aaPredicted RBP28.15■■■□□ 2.1
ABCD4-202ENST00000460308 UBR3Q6ZT12 1888 aa28.15■■■□□ 2.1
ABCD4-202ENST00000460308 KCNQ3O43525 872 aa28.15■■■□□ 2.1
ABCD4-202ENST00000460308 TRAPPC3LQ5T215 181 aa28.15■■■□□ 2.1
ABCD4-202ENST00000460308 SMIM5Q71RC9 77 aa28.15■■■□□ 2.1
ABCD4-202ENST00000460308 RPS6KA4O75676 772 aa28.14■■■□□ 2.1
ABCD4-202ENST00000460308 TEX13AQ9BXU3 409 aaPredicted RBP28.14■■■□□ 2.1
ABCD4-202ENST00000460308 UBR2Q8IWV8 1755 aa28.14■■■□□ 2.09
ABCD4-202ENST00000460308 HEG1Q9ULI3 1381 aa28.13■■■□□ 2.09
ABCD4-202ENST00000460308 AMIGO3Q86WK7 504 aa28.13■■■□□ 2.09
ABCD4-202ENST00000460308 MIS18AQ9NYP9 233 aa28.13■■■□□ 2.09
ABCD4-202ENST00000460308 TJP1Q07157 1748 aa28.12■■■□□ 2.09
ABCD4-202ENST00000460308 STARD3NLO95772 234 aa28.12■■■□□ 2.09
ABCD4-202ENST00000460308 CYP19A1P11511 503 aaPredicted RBP28.12■■■□□ 2.09
ABCD4-202ENST00000460308 POLD1P28340 1107 aa28.12■■■□□ 2.09
ABCD4-202ENST00000460308 CCDC87Q9NVE4 849 aa28.12■■■□□ 2.09
ABCD4-202ENST00000460308 APAF1O14727 1248 aa28.11■■■□□ 2.09
ABCD4-202ENST00000460308 PTGER2P43116 358 aa28.11■■■□□ 2.09
ABCD4-202ENST00000460308 MYH14Q7Z406 1995 aaKnown RBP28.11■■■□□ 2.09
ABCD4-202ENST00000460308 CICQ96RK0 1608 aaPredicted RBP28.1■■■□□ 2.09
ABCD4-202ENST00000460308 ADRA2BP18089 450 aa28.1■■■□□ 2.09
ABCD4-202ENST00000460308 INTS5Q6P9B9 1019 aaKnown RBP28.09■■■□□ 2.09
ABCD4-202ENST00000460308 SRCAPQ6ZRS2 3230 aa28.08■■■□□ 2.09
ABCD4-202ENST00000460308 RFC4P35249 363 aa28.08■■■□□ 2.09
ABCD4-202ENST00000460308 MSL1Q68DK7 614 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms