RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CCDC83Q8IWF9 413 aa17.49■□□□□ 0.39
PTPRU-205ENST00000460170 RLBP1P12271 317 aa17.48■□□□□ 0.39
PTPRU-205ENST00000460170 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
PTPRU-205ENST00000460170 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
PTPRU-205ENST00000460170 ARGLU1Q9NWB6 273 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-205ENST00000460170 ZNF771Q7L3S4 317 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-205ENST00000460170 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
PTPRU-205ENST00000460170 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
PTPRU-205ENST00000460170 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
PTPRU-205ENST00000460170 FOXO3O43524 673 aa17.47■□□□□ 0.39
PTPRU-205ENST00000460170 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
PTPRU-205ENST00000460170 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
PTPRU-205ENST00000460170 TRIM22Q8IYM9 498 aa17.47■□□□□ 0.39
PTPRU-205ENST00000460170 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
PTPRU-205ENST00000460170 SH2B1Q9NRF2 756 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-205ENST00000460170 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
PTPRU-205ENST00000460170 FERMT3Q86UX7 667 aa17.46■□□□□ 0.39
PTPRU-205ENST00000460170 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
PTPRU-205ENST00000460170 MPHOSPH8Q99549 860 aa17.46■□□□□ 0.39
PTPRU-205ENST00000460170 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
PTPRU-205ENST00000460170 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
PTPRU-205ENST00000460170 MYD88Q99836 296 aa17.46■□□□□ 0.39
PTPRU-205ENST00000460170 C8orf58Q8NAV2 365 aa17.45■□□□□ 0.38
PTPRU-205ENST00000460170 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-205ENST00000460170 MEIS3Q99687 375 aa17.45■□□□□ 0.38
PTPRU-205ENST00000460170 LIMCH1Q9UPQ0 1083 aa17.45■□□□□ 0.38
PTPRU-205ENST00000460170 SLC3A2P08195 630 aaKnown RBP17.45■□□□□ 0.38
PTPRU-205ENST00000460170 CCDC8Q9H0W5 538 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-205ENST00000460170 ABCC10Q5T3U5 1492 aa17.45■□□□□ 0.38
PTPRU-205ENST00000460170 ANKRD44Q8N8A2 993 aa17.45■□□□□ 0.38
PTPRU-205ENST00000460170 MTMR7Q9Y216 660 aa17.45■□□□□ 0.38
PTPRU-205ENST00000460170 PIK3R4Q99570 1358 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 ECHDC1Q9NTX5 307 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-205ENST00000460170 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 MAP3K11Q16584 847 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 TEX35Q5T0J7 233 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
PTPRU-205ENST00000460170 CDKL5O76039 1030 aa17.43■□□□□ 0.38
PTPRU-205ENST00000460170 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
PTPRU-205ENST00000460170 PI4KAP2A4QPH2 592 aa17.43■□□□□ 0.38
PTPRU-205ENST00000460170 CCDC69A6NI79 296 aa17.43■□□□□ 0.38
PTPRU-205ENST00000460170 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
PTPRU-205ENST00000460170 PI4KAP1Q8N8J0 262 aa17.43■□□□□ 0.38
PTPRU-205ENST00000460170 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-205ENST00000460170 TNRQ92752 1358 aa17.43■□□□□ 0.38
PTPRU-205ENST00000460170 SDSP20132 328 aa17.43■□□□□ 0.38
PTPRU-205ENST00000460170 PDE4CQ08493 712 aa17.43■□□□□ 0.38
PTPRU-205ENST00000460170 CCDC85AQ96PX6 553 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-205ENST00000460170 BAG4O95429 457 aaKnown RBP17.42■□□□□ 0.38
PTPRU-205ENST00000460170 TTC21AQ8NDW8 1320 aa17.42■□□□□ 0.38
PTPRU-205ENST00000460170 VAMP4O75379 141 aa17.42■□□□□ 0.38
PTPRU-205ENST00000460170 CCP110O43303 1012 aa17.42■□□□□ 0.38
PTPRU-205ENST00000460170 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
PTPRU-205ENST00000460170 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
PTPRU-205ENST00000460170 FILIP1LQ4L180 1135 aa17.42■□□□□ 0.38
PTPRU-205ENST00000460170 TSHZ3Q63HK5 1081 aa17.42■□□□□ 0.38
PTPRU-205ENST00000460170 CEP57L1Q8IYX8 460 aa17.42■□□□□ 0.38
PTPRU-205ENST00000460170 RNF123Q5XPI4 1314 aa17.42■□□□□ 0.38
PTPRU-205ENST00000460170 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-205ENST00000460170 SERPINC1P01008 464 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 TXLNAP40222 546 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
PTPRU-205ENST00000460170 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 EVI5LQ96CN4 794 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 ZBTB40Q9NUA8 1239 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 UHRF1BP1LA0JNW5 1464 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 SMC5Q8IY18 1101 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 MAGI3Q5TCQ9 1506 aa17.41■□□□□ 0.38
PTPRU-205ENST00000460170 STARD3NLO95772 234 aa17.4■□□□□ 0.38
PTPRU-205ENST00000460170 AKAP2Q9Y2D5 859 aa17.4■□□□□ 0.38
PTPRU-205ENST00000460170 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
PTPRU-205ENST00000460170 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
PTPRU-205ENST00000460170 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
PTPRU-205ENST00000460170 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
PTPRU-205ENST00000460170 ANO8Q9HCE9 1232 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-205ENST00000460170 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
PTPRU-205ENST00000460170 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
PTPRU-205ENST00000460170 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 PDE1AP54750 535 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 MEX3CQ5U5Q3 659 aaKnown RBP17.39■□□□□ 0.37
PTPRU-205ENST00000460170 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 TCEAL9Q9UHQ7 104 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 PHACTR3Q96KR7 559 aa17.39■□□□□ 0.37
PTPRU-205ENST00000460170 TDO2P48775 406 aa17.38■□□□□ 0.37
PTPRU-205ENST00000460170 KLHL40Q2TBA0 621 aa17.38■□□□□ 0.37
PTPRU-205ENST00000460170 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
PTPRU-205ENST00000460170 A0A087WZG4 1122 aa17.38■□□□□ 0.37
PTPRU-205ENST00000460170 SNX21Q969T3 373 aa17.38■□□□□ 0.37
PTPRU-205ENST00000460170 INSRP06213 1382 aa17.38■□□□□ 0.37
PTPRU-205ENST00000460170 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
PTPRU-205ENST00000460170 PIP4K2AP48426 406 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-205ENST00000460170 ZFYVE9O95405 1425 aa17.37■□□□□ 0.37
PTPRU-205ENST00000460170 CAMK4Q16566 473 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms