RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 ANO8Q9HCE9 1232 aaPredicted RBP7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 BABAM1Q9NWV8 329 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 KIF1AQ12756 1690 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 TCHHQ07283 1943 aa7.56□□□□□ -1.2
UBQLN4-202ENST00000459954 PXDNLA1KZ92 1463 aa7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 USP6P35125 1406 aa7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 CRB1P82279 1406 aa7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 REC8O95072 547 aa7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 CYP2E1P05181 493 aaPredicted RBP7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 MCM2P49736 904 aa7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 KLHL34Q8N239 644 aa7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 KDRP35968 1356 aa7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 MARF1Q9Y4F3 1742 aaKnown RBP7.55□□□□□ -1.2
UBQLN4-202ENST00000459954 SPATA31A3Q5VYP0 1347 aa7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 ROBO1Q9Y6N7 1651 aa7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 HSP90AA1P07900 732 aaKnown RBP7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 GSPT1P15170 499 aaKnown RBP7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 CCT4P50991 539 aaKnown RBP7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 ZNF445P59923 1031 aa7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 EIF4A2Q14240 407 aaKnown RBP7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 CEP85Q6P2H3 762 aa7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 SPRYD3Q8NCJ5 442 aa7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 PPP1R9BQ96SB3 815 aa7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 RRAGDQ9NQL2 400 aaPredicted RBP7.54□□□□□ -1.2
UBQLN4-202ENST00000459954 ACEP12821 1306 aa7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 ST18O60284 1047 aa7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 BAG4O95429 457 aaKnown RBP7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 CCDC173Q0VFZ6 552 aa7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 HS1BP3Q53T59 392 aa7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 GAS2L2Q8NHY3 880 aa7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 THUMPD2Q9BTF0 503 aaKnown RBP7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 CHMP4AQ9BY43 222 aa7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 SRCIN1Q9C0H9 1055 aa7.53□□□□□ -1.2
UBQLN4-202ENST00000459954 AOX1Q06278 1338 aa7.52□□□□□ -1.2
UBQLN4-202ENST00000459954 PRR36Q9H6K5 1346 aa7.52□□□□□ -1.2
UBQLN4-202ENST00000459954 PHRF1Q9P1Y6 1649 aaKnown RBP7.52□□□□□ -1.2
UBQLN4-202ENST00000459954 PIK3C2AO00443 1686 aa7.52□□□□□ -1.21
UBQLN4-202ENST00000459954 ESPNB1AK53 854 aa7.52□□□□□ -1.21
UBQLN4-202ENST00000459954 ERC2O15083 957 aa7.52□□□□□ -1.21
UBQLN4-202ENST00000459954 ANAPC15P60006 121 aa7.52□□□□□ -1.21
UBQLN4-202ENST00000459954 SULT6B1Q6IMI4 303 aa7.52□□□□□ -1.21
UBQLN4-202ENST00000459954 KCNH5Q8NCM2 988 aa7.52□□□□□ -1.21
UBQLN4-202ENST00000459954 C1orf115Q9H7X2 142 aa7.52□□□□□ -1.21
UBQLN4-202ENST00000459954 KDM3BQ7LBC6 1761 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 FLT4P35916 1363 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 NUTM2FA1L443 756 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 CD2BP2O95400 341 aaKnown RBP7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 GNAI3P08754 354 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 SDSP20132 328 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 FBLN1P23142 703 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 ZNF772Q68DY9 489 aaPredicted RBP7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 ANP32BQ92688 251 aaKnown RBP7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 PANK2Q9BZ23 570 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 GZF1Q9H116 711 aaPredicted RBP7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 ZRANB1Q9UGI0 708 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 STAP2Q9UGK3 403 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 CRYBG1Q9Y4K1 1723 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 NHSL1Q5SYE7 1610 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 TNS3Q68CZ2 1445 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 LTN1O94822 1766 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 IGSF1Q8N6C5 1336 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 SALL3Q9BXA9 1300 aa7.51□□□□□ -1.21
UBQLN4-202ENST00000459954 PXDNQ92626 1479 aa7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 FAM83GA6ND36 823 aa7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 ELL2O00472 640 aaPredicted RBP7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 SSFA2P28290 1259 aa7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 TERF1P54274 439 aa7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 RRS1Q15050 365 aaKnown RBP7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 TRIM44Q96DX7 344 aaPredicted RBP7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 INTS4Q96HW7 963 aaKnown RBP7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 LMO7Q8WWI1 1683 aa7.5□□□□□ -1.21
UBQLN4-202ENST00000459954 PHLPP1O60346 1717 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 COL16A1Q07092 1604 aaPredicted RBP7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 GNAI2P04899 355 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 SLC4A2P04920 1241 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 MCCP23508 829 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 PDE1AP54750 535 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 ATP8B2P98198 1209 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 CUL4AQ13619 759 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 CCDC30Q5VVM6 783 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 GAS2L3Q86XJ1 694 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 RTF1Q92541 710 aaKnown RBP7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 RBM42Q9BTD8 480 aaKnown RBP7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 LMBRD1Q9NUN5 540 aa7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 DDX49Q9Y6V7 483 aaKnown RBP7.49□□□□□ -1.21
UBQLN4-202ENST00000459954 RAB11FIP3O75154 756 aa7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 MBD3O95983 291 aa7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 MCM5P33992 734 aa7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 MAPK8IP2Q13387 824 aaPredicted RBP7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 DCTN1Q14203 1278 aa7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 MEX3CQ5U5Q3 659 aaKnown RBP7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 C16orf71Q8IYS4 520 aaPredicted RBP7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 MEIS3Q99687 375 aa7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 STK31Q9BXU1 1019 aa7.48□□□□□ -1.21
UBQLN4-202ENST00000459954 MED1Q15648 1581 aaPredicted RBP7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 TPM2P07951 284 aa7.47□□□□□ -1.21
UBQLN4-202ENST00000459954 HOXB7P09629 217 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms