RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ZSCAN30Q86W11 494 aa10.47□□□□□ -0.73
VPS50-208ENST00000458707 USP26Q9BXU7 913 aa10.47□□□□□ -0.73
VPS50-208ENST00000458707 RGS12O14924 1447 aa10.47□□□□□ -0.73
VPS50-208ENST00000458707 EDC4Q6P2E9 1401 aaKnown RBP10.47□□□□□ -0.73
VPS50-208ENST00000458707 TIE1P35590 1138 aa10.47□□□□□ -0.73
VPS50-208ENST00000458707 TERF1P54274 439 aa10.47□□□□□ -0.73
VPS50-208ENST00000458707 INTS3Q68E01 1043 aaKnown RBP10.47□□□□□ -0.73
VPS50-208ENST00000458707 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
VPS50-208ENST00000458707 CWC22Q9HCG8 908 aaKnown RBP10.47□□□□□ -0.73
VPS50-208ENST00000458707 RGPD1P0DJD0 1748 aa10.46□□□□□ -0.73
VPS50-208ENST00000458707 TCHHQ07283 1943 aa10.46□□□□□ -0.73
VPS50-208ENST00000458707 SCUBE2Q9NQ36 999 aa10.46□□□□□ -0.74
VPS50-208ENST00000458707 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.74
VPS50-208ENST00000458707 LMBRD1Q9NUN5 540 aa10.46□□□□□ -0.74
VPS50-208ENST00000458707 NRXN3Q9Y4C0 1643 aa10.45□□□□□ -0.74
VPS50-208ENST00000458707 OFD1O75665 1012 aa10.45□□□□□ -0.74
VPS50-208ENST00000458707 HMOX1P09601 288 aa10.45□□□□□ -0.74
VPS50-208ENST00000458707 ANKRD44Q8N8A2 993 aa10.45□□□□□ -0.74
VPS50-208ENST00000458707 C8orf58Q8NAV2 365 aa10.45□□□□□ -0.74
VPS50-208ENST00000458707 ANP32BQ92688 251 aaKnown RBP10.45□□□□□ -0.74
VPS50-208ENST00000458707 CHMP4AQ9BY43 222 aa10.45□□□□□ -0.74
VPS50-208ENST00000458707 NALCNQ8IZF0 1738 aa10.45□□□□□ -0.74
VPS50-208ENST00000458707 PDLIM2Q96JY6 352 aa10.44□□□□□ -0.74
VPS50-208ENST00000458707 FMN2Q9NZ56 1722 aa10.44□□□□□ -0.74
VPS50-208ENST00000458707 ZSCAN23Q3MJ62 389 aa10.44□□□□□ -0.74
VPS50-208ENST00000458707 RPAP2Q8IXW5 612 aaPredicted RBP10.44□□□□□ -0.74
VPS50-208ENST00000458707 TSPOAP1O95153 1857 aa10.44□□□□□ -0.74
VPS50-208ENST00000458707 MCTP1Q6DN14 999 aa10.43□□□□□ -0.74
VPS50-208ENST00000458707 PAXIP1Q6ZW49 1069 aaPredicted RBP10.43□□□□□ -0.74
VPS50-208ENST00000458707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS50-208ENST00000458707 ELL2O00472 640 aaPredicted RBP10.42□□□□□ -0.74
VPS50-208ENST00000458707 FBLN1P23142 703 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
VPS50-208ENST00000458707 KIAA1211Q6ZU35 1233 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 EMILIN1Q9Y6C2 1016 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 KIAA0232Q92628 1395 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 CPS1P31327 1500 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 ST18O60284 1047 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 ZNF500O60304 480 aaPredicted RBP10.42□□□□□ -0.74
VPS50-208ENST00000458707 RAPGEF3O95398 923 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 CHRM1P11229 460 aaPredicted RBP10.42□□□□□ -0.74
VPS50-208ENST00000458707 SDSP20132 328 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 MSNP26038 577 aaKnown RBP10.42□□□□□ -0.74
VPS50-208ENST00000458707 HAP1P54257 671 aaPredicted RBP10.42□□□□□ -0.74
VPS50-208ENST00000458707 CEP85Q6P2H3 762 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 NOL7Q9UMY1 257 aaKnown RBP10.42□□□□□ -0.74
VPS50-208ENST00000458707 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
VPS50-208ENST00000458707 MAP3K13O43283 966 aa10.41□□□□□ -0.74
VPS50-208ENST00000458707 GTF2E1P29083 439 aaPredicted RBP10.41□□□□□ -0.74
VPS50-208ENST00000458707 CAVIN1Q6NZI2 390 aaKnown RBP10.41□□□□□ -0.74
VPS50-208ENST00000458707 CASC1Q6TDU7 716 aa10.41□□□□□ -0.74
VPS50-208ENST00000458707 PDCL3Q9H2J4 239 aa10.41□□□□□ -0.74
VPS50-208ENST00000458707 ZDHHC9Q9Y397 364 aa10.41□□□□□ -0.74
VPS50-208ENST00000458707 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
VPS50-208ENST00000458707 POTEFA5A3E0 1075 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 REC8O95072 547 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 PTPRCP08575 1304 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 MSH6P52701 1360 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 PKP1Q13835 747 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 C16orf71Q8IYS4 520 aaPredicted RBP10.4□□□□□ -0.74
VPS50-208ENST00000458707 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 XRN1Q8IZH2 1706 aaKnown RBP10.4□□□□□ -0.74
VPS50-208ENST00000458707 RBSNQ9H1K0 784 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 FAM208AQ9UK61 1670 aaKnown RBP10.4□□□□□ -0.74
VPS50-208ENST00000458707 PEAK1Q9H792 1746 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 A2ML1A8K2U0 1454 aa10.4□□□□□ -0.74
VPS50-208ENST00000458707 GPT2Q8TD30 523 aa10.4□□□□□ -0.75
VPS50-208ENST00000458707 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.75
VPS50-208ENST00000458707 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.75
VPS50-208ENST00000458707 FAM83GA6ND36 823 aa10.39□□□□□ -0.75
VPS50-208ENST00000458707 CHL1O00533 1208 aa10.39□□□□□ -0.75
VPS50-208ENST00000458707 MCM5P33992 734 aa10.39□□□□□ -0.75
VPS50-208ENST00000458707 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
VPS50-208ENST00000458707 OTUD7AQ8TE49 926 aaPredicted RBP10.39□□□□□ -0.75
VPS50-208ENST00000458707 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
VPS50-208ENST00000458707 BCCIPQ9P287 314 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS50-208ENST00000458707 TRPC6Q9Y210 931 aa10.39□□□□□ -0.75
VPS50-208ENST00000458707 ERC2O15083 957 aa10.38□□□□□ -0.75
VPS50-208ENST00000458707 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
VPS50-208ENST00000458707 LRSAM1Q6UWE0 723 aa10.38□□□□□ -0.75
VPS50-208ENST00000458707 NME9Q86XW9 330 aa10.38□□□□□ -0.75
VPS50-208ENST00000458707 ZGPATQ8N5A5 531 aaKnown RBP10.38□□□□□ -0.75
VPS50-208ENST00000458707 PRPF40AO75400 957 aaKnown RBP10.38□□□□□ -0.75
VPS50-208ENST00000458707 IL17RAQ96F46 866 aa10.38□□□□□ -0.75
VPS50-208ENST00000458707 LRRC37A3O60309 1634 aa10.37□□□□□ -0.75
VPS50-208ENST00000458707 WASLO00401 505 aaPredicted RBP10.37□□□□□ -0.75
VPS50-208ENST00000458707 MBD3O95983 291 aa10.37□□□□□ -0.75
VPS50-208ENST00000458707 NCLP19338 710 aaKnown RBP10.37□□□□□ -0.75
VPS50-208ENST00000458707 MCM2P49736 904 aa10.37□□□□□ -0.75
VPS50-208ENST00000458707 WAPLQ7Z5K2 1190 aa10.37□□□□□ -0.75
VPS50-208ENST00000458707 ZKSCAN5Q9Y2L8 839 aa10.37□□□□□ -0.75
VPS50-208ENST00000458707 AGLP35573 1532 aa10.37□□□□□ -0.75
VPS50-208ENST00000458707 TECPR2O15040 1411 aa10.37□□□□□ -0.75
VPS50-208ENST00000458707 TULP1O00294 542 aaPredicted RBP10.36□□□□□ -0.75
VPS50-208ENST00000458707 CUL4AQ13619 759 aa10.36□□□□□ -0.75
VPS50-208ENST00000458707 DCTN1Q14203 1278 aa10.36□□□□□ -0.75
VPS50-208ENST00000458707 COG3Q96JB2 828 aa10.36□□□□□ -0.75
VPS50-208ENST00000458707 TMEM63CQ9P1W3 806 aa10.36□□□□□ -0.75
VPS50-208ENST00000458707 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms