RNA–Protein interactions for RNA: ENST00000458632.2

SHANK2-212, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-212ENST00000458632 LRRC4BQ9NT99 713 aa16.37■□□□□ 0.21
SHANK2-212ENST00000458632 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
SHANK2-212ENST00000458632 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
SHANK2-212ENST00000458632 KCNQ3O43525 872 aa16.36■□□□□ 0.21
SHANK2-212ENST00000458632 TEFQ10587 303 aa16.36■□□□□ 0.21
SHANK2-212ENST00000458632 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
SHANK2-212ENST00000458632 LRRC37A3O60309 1634 aa16.36■□□□□ 0.21
SHANK2-212ENST00000458632 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
SHANK2-212ENST00000458632 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
SHANK2-212ENST00000458632 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
SHANK2-212ENST00000458632 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
SHANK2-212ENST00000458632 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.2
SHANK2-212ENST00000458632 SIK1P57059 783 aa16.33■□□□□ 0.2
SHANK2-212ENST00000458632 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
SHANK2-212ENST00000458632 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
SHANK2-212ENST00000458632 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
SHANK2-212ENST00000458632 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
SHANK2-212ENST00000458632 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
SHANK2-212ENST00000458632 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
SHANK2-212ENST00000458632 CCNL1Q9UK58 526 aaPredicted RBP16.31■□□□□ 0.2
SHANK2-212ENST00000458632 CHL1O00533 1208 aa16.3■□□□□ 0.2
SHANK2-212ENST00000458632 ATP6V1AP38606 617 aa16.3■□□□□ 0.2
SHANK2-212ENST00000458632 ITPK1Q13572 414 aa16.3■□□□□ 0.2
SHANK2-212ENST00000458632 WWC1Q8IX03 1113 aa16.3■□□□□ 0.2
SHANK2-212ENST00000458632 ZNF496Q96IT1 587 aaPredicted RBP16.29■□□□□ 0.2
SHANK2-212ENST00000458632 KAT6BQ8WYB5 2073 aa16.29■□□□□ 0.2
SHANK2-212ENST00000458632 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
SHANK2-212ENST00000458632 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
SHANK2-212ENST00000458632 NBPF14Q5TI25 921 aa16.28■□□□□ 0.2
SHANK2-212ENST00000458632 LAS1LQ9Y4W2 734 aaKnown RBP16.28■□□□□ 0.2
SHANK2-212ENST00000458632 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
SHANK2-212ENST00000458632 TTC5Q8N0Z6 440 aa16.26■□□□□ 0.19
SHANK2-212ENST00000458632 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
SHANK2-212ENST00000458632 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
SHANK2-212ENST00000458632 SLC15A2Q16348 729 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 SMIM5Q71RC9 77 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 USP16Q9Y5T5 823 aa16.25■□□□□ 0.19
SHANK2-212ENST00000458632 PRAMEF22A3QJZ6 481 aa16.24■□□□□ 0.19
SHANK2-212ENST00000458632 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
SHANK2-212ENST00000458632 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
SHANK2-212ENST00000458632 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
SHANK2-212ENST00000458632 FMNL2Q96PY5 1086 aa16.24■□□□□ 0.19
SHANK2-212ENST00000458632 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
SHANK2-212ENST00000458632 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
SHANK2-212ENST00000458632 SHANK3Q9BYB0 1731 aa16.24■□□□□ 0.19
SHANK2-212ENST00000458632 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
SHANK2-212ENST00000458632 R3HDM1Q15032 1099 aaKnown RBP16.23■□□□□ 0.19
SHANK2-212ENST00000458632 WNK3Q9BYP7 1800 aa16.23■□□□□ 0.19
SHANK2-212ENST00000458632 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 SNRPA1P09661 255 aaKnown RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 HMGB2P26583 209 aaKnown RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 ZNF827Q17R98 1081 aa16.22■□□□□ 0.19
SHANK2-212ENST00000458632 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 TEX13AQ9BXU3 409 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-212ENST00000458632 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
SHANK2-212ENST00000458632 GNAI1P63096 354 aa16.21■□□□□ 0.19
SHANK2-212ENST00000458632 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
SHANK2-212ENST00000458632 PDGFDQ9GZP0 370 aaPredicted RBP16.21■□□□□ 0.19
SHANK2-212ENST00000458632 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
SHANK2-212ENST00000458632 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
SHANK2-212ENST00000458632 TFCP2L1Q9NZI6 479 aa16.21■□□□□ 0.19
SHANK2-212ENST00000458632 STARD3NLO95772 234 aa16.2■□□□□ 0.18
SHANK2-212ENST00000458632 A1BGP04217 495 aa16.2■□□□□ 0.18
SHANK2-212ENST00000458632 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
SHANK2-212ENST00000458632 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
SHANK2-212ENST00000458632 CRKLP46109 303 aaKnown RBP16.19■□□□□ 0.18
SHANK2-212ENST00000458632 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
SHANK2-212ENST00000458632 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
SHANK2-212ENST00000458632 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
SHANK2-212ENST00000458632 C8orf58Q8NAV2 365 aa16.18■□□□□ 0.18
SHANK2-212ENST00000458632 IL16Q14005 1332 aa16.18■□□□□ 0.18
SHANK2-212ENST00000458632 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
SHANK2-212ENST00000458632 ELL2O00472 640 aaPredicted RBP16.17■□□□□ 0.18
SHANK2-212ENST00000458632 TSR2Q969E8 191 aaKnown RBP16.17■□□□□ 0.18
SHANK2-212ENST00000458632 TRAPPC3LQ5T215 181 aa16.16■□□□□ 0.18
SHANK2-212ENST00000458632 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
SHANK2-212ENST00000458632 CDCA7LQ96GN5 454 aa16.16■□□□□ 0.18
SHANK2-212ENST00000458632 AK7Q96M32 723 aa16.16■□□□□ 0.18
SHANK2-212ENST00000458632 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
SHANK2-212ENST00000458632 NHSQ6T4R5 1651 aa16.15■□□□□ 0.18
SHANK2-212ENST00000458632 GNPATO15228 680 aa16.15■□□□□ 0.18
SHANK2-212ENST00000458632 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
SHANK2-212ENST00000458632 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
SHANK2-212ENST00000458632 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
SHANK2-212ENST00000458632 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
SHANK2-212ENST00000458632 TSPYL6Q8N831 410 aa16.15■□□□□ 0.18
SHANK2-212ENST00000458632 ARHGEF1Q92888 912 aaKnown RBP16.15■□□□□ 0.18
SHANK2-212ENST00000458632 RTCBQ9Y3I0 505 aaKnown RBP16.15■□□□□ 0.18
SHANK2-212ENST00000458632 TOGARAM1Q9Y4F4 1720 aa16.15■□□□□ 0.18
SHANK2-212ENST00000458632 MRC1P22897 1456 aa16.15■□□□□ 0.18
SHANK2-212ENST00000458632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms