RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 MX1P20591 662 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 LRRCC1Q9C099 1032 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 FLIIQ13045 1269 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 CLEC17AQ6ZS10 378 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 USHBP1Q8N6Y0 703 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 EYA1Q99502 592 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 IL25Q9H293 177 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 KIF24Q5T7B8 1368 aa23.9■■□□□ 1.42
CNEP1R1-203ENST00000458059 ZSCAN30Q86W11 494 aa23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 ESYT1Q9BSJ8 1104 aa23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 CRB1P82279 1406 aa23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 CEBPAP49715 358 aaPredicted RBP23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 CCT4P50991 539 aaKnown RBP23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 CWC22Q9HCG8 908 aaKnown RBP23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 PPP1R9BQ96SB3 815 aa23.88■■□□□ 1.41
CNEP1R1-203ENST00000458059 KIAA0232Q92628 1395 aa23.87■■□□□ 1.41
CNEP1R1-203ENST00000458059 EIF2S2P20042 333 aaKnown RBP23.87■■□□□ 1.41
CNEP1R1-203ENST00000458059 ZNF445P59923 1031 aa23.87■■□□□ 1.41
CNEP1R1-203ENST00000458059 LTKP29376 864 aa23.86■■□□□ 1.41
CNEP1R1-203ENST00000458059 SETD1AO15047 1707 aaKnown RBP23.86■■□□□ 1.41
CNEP1R1-203ENST00000458059 ARID3AQ99856 593 aa23.85■■□□□ 1.41
CNEP1R1-203ENST00000458059 NRXN3Q9Y4C0 1643 aa23.85■■□□□ 1.41
CNEP1R1-203ENST00000458059 PHAXQ9H814 394 aaKnown RBP23.85■■□□□ 1.41
CNEP1R1-203ENST00000458059 RBM10P98175 930 aaKnown RBP23.84■■□□□ 1.41
CNEP1R1-203ENST00000458059 CHMLP26374 656 aa23.84■■□□□ 1.41
CNEP1R1-203ENST00000458059 ANXA1P04083 346 aa23.83■■□□□ 1.41
CNEP1R1-203ENST00000458059 NLRP6P59044 892 aa23.83■■□□□ 1.41
CNEP1R1-203ENST00000458059 R3HCC1Q9Y3T6 440 aaKnown RBP23.83■■□□□ 1.41
CNEP1R1-203ENST00000458059 GADD45BO75293 160 aaPredicted RBP23.82■■□□□ 1.4
CNEP1R1-203ENST00000458059 MON2Q7Z3U7 1717 aa23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 MCCP23508 829 aa23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 C3P01024 1663 aa23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 PEAK1Q9H792 1746 aa23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 SURF6O75683 361 aaKnown RBP23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 HDGFP51858 240 aaKnown RBP23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 DDX54Q8TDD1 881 aaKnown RBP23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 ITSN1Q15811 1721 aa23.81■■□□□ 1.4
CNEP1R1-203ENST00000458059 USP6P35125 1406 aa23.8■■□□□ 1.4
CNEP1R1-203ENST00000458059 CPA1P15085 419 aa23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 OVOS2A0A0J9YW53 1432 aa23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 OVOS2Q6IE36 1432 aa23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 UBTFL1P0CB47 393 aaPredicted RBP23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 CCDC30Q5VVM6 783 aa23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 OSBPL3Q9H4L5 887 aa23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 RBM33Q96EV2 1170 aaKnown RBP23.79■■□□□ 1.4
CNEP1R1-203ENST00000458059 ATP8B2P98198 1209 aa23.78■■□□□ 1.4
CNEP1R1-203ENST00000458059 SPATA31D1Q6ZQQ2 1576 aa23.78■■□□□ 1.4
CNEP1R1-203ENST00000458059 REREQ9P2R6 1566 aa23.78■■□□□ 1.4
CNEP1R1-203ENST00000458059 GNAI3P08754 354 aa23.78■■□□□ 1.4
CNEP1R1-203ENST00000458059 LRSAM1Q6UWE0 723 aa23.77■■□□□ 1.4
CNEP1R1-203ENST00000458059 IL17REQ8NFR9 667 aa23.77■■□□□ 1.4
CNEP1R1-203ENST00000458059 USP44Q9H0E7 712 aa23.77■■□□□ 1.4
CNEP1R1-203ENST00000458059 IBTKQ9P2D0 1353 aaPredicted RBP23.77■■□□□ 1.4
CNEP1R1-203ENST00000458059 AMOTL2Q9Y2J4 779 aa23.77■■□□□ 1.4
CNEP1R1-203ENST00000458059 HDGFL1Q5TGJ6 251 aa23.76■■□□□ 1.39
CNEP1R1-203ENST00000458059 CEP170BQ9Y4F5 1589 aaPredicted RBP23.76■■□□□ 1.39
CNEP1R1-203ENST00000458059 PLEKHG3A1L390 1219 aa23.76■■□□□ 1.39
CNEP1R1-203ENST00000458059 GNAT3A8MTJ3 354 aa23.76■■□□□ 1.39
CNEP1R1-203ENST00000458059 PPP1R42Q7Z4L9 355 aa23.76■■□□□ 1.39
CNEP1R1-203ENST00000458059 PTMAP06454 111 aaKnown RBP23.76■■□□□ 1.39
CNEP1R1-203ENST00000458059 BRD1O95696 1058 aa23.75■■□□□ 1.39
CNEP1R1-203ENST00000458059 SPG7Q9UQ90 795 aa23.75■■□□□ 1.39
CNEP1R1-203ENST00000458059 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-203ENST00000458059 SALL3Q9BXA9 1300 aa23.75■■□□□ 1.39
CNEP1R1-203ENST00000458059 TNRQ92752 1358 aa23.74■■□□□ 1.39
CNEP1R1-203ENST00000458059 TMEM2Q9UHN6 1383 aa23.74■■□□□ 1.39
CNEP1R1-203ENST00000458059 CWC27Q6UX04 472 aaKnown RBP23.74■■□□□ 1.39
CNEP1R1-203ENST00000458059 AKAP12Q02952 1782 aa23.74■■□□□ 1.39
CNEP1R1-203ENST00000458059 SRGAP3O43295 1099 aa23.73■■□□□ 1.39
CNEP1R1-203ENST00000458059 FLT4P35916 1363 aa23.73■■□□□ 1.39
CNEP1R1-203ENST00000458059 NBPF7P0C2Y1 421 aaPredicted RBP23.73■■□□□ 1.39
CNEP1R1-203ENST00000458059 SETD1BQ9UPS6 1966 aaKnown RBP23.73■■□□□ 1.39
CNEP1R1-203ENST00000458059 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
CNEP1R1-203ENST00000458059 PLCB2Q00722 1185 aa23.72■■□□□ 1.39
CNEP1R1-203ENST00000458059 FAM13BQ9NYF5 915 aa23.72■■□□□ 1.39
CNEP1R1-203ENST00000458059 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.72■■□□□ 1.39
CNEP1R1-203ENST00000458059 OS9Q13438 667 aaPredicted RBP23.72■■□□□ 1.39
CNEP1R1-203ENST00000458059 USP48Q86UV5 1035 aa23.72■■□□□ 1.39
CNEP1R1-203ENST00000458059 ZNF830Q96NB3 372 aaPredicted RBP23.72■■□□□ 1.39
CNEP1R1-203ENST00000458059 OFD1O75665 1012 aa23.71■■□□□ 1.39
CNEP1R1-203ENST00000458059 RRP9O43818 475 aaKnown RBP23.71■■□□□ 1.39
CNEP1R1-203ENST00000458059 NRKQ7Z2Y5 1582 aa23.71■■□□□ 1.39
CNEP1R1-203ENST00000458059 ARHGEF10O15013 1369 aa23.71■■□□□ 1.39
CNEP1R1-203ENST00000458059 KCNQ3O43525 872 aa23.7■■□□□ 1.39
CNEP1R1-203ENST00000458059 ABTB2Q8N961 1025 aa23.7■■□□□ 1.38
CNEP1R1-203ENST00000458059 CNPY2Q9Y2B0 182 aa23.7■■□□□ 1.38
CNEP1R1-203ENST00000458059 ADAMTS13Q76LX8 1427 aa23.7■■□□□ 1.38
CNEP1R1-203ENST00000458059 RASEFQ8IZ41 740 aa23.7■■□□□ 1.38
CNEP1R1-203ENST00000458059 NOL7Q9UMY1 257 aaKnown RBP23.69■■□□□ 1.38
CNEP1R1-203ENST00000458059 SOS1Q07889 1333 aaPredicted RBP23.69■■□□□ 1.38
CNEP1R1-203ENST00000458059 IGSF1Q8N6C5 1336 aa23.69■■□□□ 1.38
CNEP1R1-203ENST00000458059 CUL4AQ13619 759 aa23.69■■□□□ 1.38
CNEP1R1-203ENST00000458059 SBNO1A3KN83 1393 aa23.69■■□□□ 1.38
CNEP1R1-203ENST00000458059 FIBPO43427 364 aa23.68■■□□□ 1.38
CNEP1R1-203ENST00000458059 MBD3O95983 291 aa23.68■■□□□ 1.38
CNEP1R1-203ENST00000458059 SIRT1Q96EB6 747 aa23.68■■□□□ 1.38
CNEP1R1-203ENST00000458059 PDLIM2Q96JY6 352 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms