RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 LY75O60449 1722 aa18.68■□□□□ 0.58
SMPD4-215ENST00000457039 MCM10Q7L590 875 aa18.67■□□□□ 0.58
SMPD4-215ENST00000457039 ATG3Q9NT62 314 aa18.67■□□□□ 0.58
SMPD4-215ENST00000457039 SIPA1L3O60292 1781 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-215ENST00000457039 RIPK4P57078 832 aa18.66■□□□□ 0.58
SMPD4-215ENST00000457039 DCTN1Q14203 1278 aa18.66■□□□□ 0.58
SMPD4-215ENST00000457039 TXNRD1Q16881 649 aa18.66■□□□□ 0.58
SMPD4-215ENST00000457039 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
SMPD4-215ENST00000457039 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
SMPD4-215ENST00000457039 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
SMPD4-215ENST00000457039 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
SMPD4-215ENST00000457039 PAPPAQ13219 1627 aa18.65■□□□□ 0.58
SMPD4-215ENST00000457039 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-215ENST00000457039 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
SMPD4-215ENST00000457039 APAF1O14727 1248 aa18.64■□□□□ 0.57
SMPD4-215ENST00000457039 TEFQ10587 303 aa18.63■□□□□ 0.57
SMPD4-215ENST00000457039 FAM9BQ8IZU0 186 aa18.63■□□□□ 0.57
SMPD4-215ENST00000457039 LRRC4BQ9NT99 713 aa18.63■□□□□ 0.57
SMPD4-215ENST00000457039 TRIM35Q9UPQ4 493 aa18.63■□□□□ 0.57
SMPD4-215ENST00000457039 SLC27A3Q5K4L6 730 aa18.62■□□□□ 0.57
SMPD4-215ENST00000457039 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
SMPD4-215ENST00000457039 NEUROD2Q15784 382 aa18.61■□□□□ 0.57
SMPD4-215ENST00000457039 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
SMPD4-215ENST00000457039 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
SMPD4-215ENST00000457039 SIK1P57059 783 aa18.6■□□□□ 0.57
SMPD4-215ENST00000457039 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
SMPD4-215ENST00000457039 CCNL1Q9UK58 526 aaPredicted RBP18.6■□□□□ 0.57
SMPD4-215ENST00000457039 ZNF831Q5JPB2 1677 aa18.6■□□□□ 0.57
SMPD4-215ENST00000457039 KCPQ6ZWJ8 1503 aa18.59■□□□□ 0.57
SMPD4-215ENST00000457039 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
SMPD4-215ENST00000457039 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
SMPD4-215ENST00000457039 UBR2Q8IWV8 1755 aa18.59■□□□□ 0.57
SMPD4-215ENST00000457039 KCNQ4P56696 695 aa18.58■□□□□ 0.56
SMPD4-215ENST00000457039 CICQ96RK0 1608 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-215ENST00000457039 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
SMPD4-215ENST00000457039 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-215ENST00000457039 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
SMPD4-215ENST00000457039 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-215ENST00000457039 CCDC27Q2M243 656 aa18.56■□□□□ 0.56
SMPD4-215ENST00000457039 TAF1LQ8IZX4 1826 aa18.56■□□□□ 0.56
SMPD4-215ENST00000457039 C5P01031 1676 aa18.55■□□□□ 0.56
SMPD4-215ENST00000457039 KCNQ3O43525 872 aa18.55■□□□□ 0.56
SMPD4-215ENST00000457039 PTCD1O75127 700 aaKnown RBP18.55■□□□□ 0.56
SMPD4-215ENST00000457039 ITPK1Q13572 414 aa18.55■□□□□ 0.56
SMPD4-215ENST00000457039 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
SMPD4-215ENST00000457039 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
SMPD4-215ENST00000457039 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
SMPD4-215ENST00000457039 AKT1S1Q96B36 256 aa18.54■□□□□ 0.56
SMPD4-215ENST00000457039 TJP1Q07157 1748 aa18.54■□□□□ 0.56
SMPD4-215ENST00000457039 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
SMPD4-215ENST00000457039 ZNF827Q17R98 1081 aa18.53■□□□□ 0.56
SMPD4-215ENST00000457039 NBPF14Q5TI25 921 aa18.53■□□□□ 0.56
SMPD4-215ENST00000457039 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
SMPD4-215ENST00000457039 LINC00116Q8NCU8 138 aa18.53■□□□□ 0.56
SMPD4-215ENST00000457039 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
SMPD4-215ENST00000457039 BABAM1Q9NWV8 329 aa18.53■□□□□ 0.56
SMPD4-215ENST00000457039 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
SMPD4-215ENST00000457039 COL5A3P25940 1745 aaPredicted RBP18.52■□□□□ 0.56
SMPD4-215ENST00000457039 VSIG10Q8N0Z9 540 aa18.52■□□□□ 0.56
SMPD4-215ENST00000457039 C4BP0C0L5 1744 aa18.52■□□□□ 0.55
SMPD4-215ENST00000457039 HMGB2P26583 209 aaKnown RBP18.51■□□□□ 0.55
SMPD4-215ENST00000457039 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
SMPD4-215ENST00000457039 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
SMPD4-215ENST00000457039 HEG1Q9ULI3 1381 aa18.51■□□□□ 0.55
SMPD4-215ENST00000457039 CHL1O00533 1208 aa18.5■□□□□ 0.55
SMPD4-215ENST00000457039 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
SMPD4-215ENST00000457039 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
SMPD4-215ENST00000457039 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
SMPD4-215ENST00000457039 STK32BQ9NY57 414 aa18.5■□□□□ 0.55
SMPD4-215ENST00000457039 DNAJC10Q8IXB1 793 aa18.49■□□□□ 0.55
SMPD4-215ENST00000457039 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
SMPD4-215ENST00000457039 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
SMPD4-215ENST00000457039 EIF4A1P60842 406 aaKnown RBP18.48■□□□□ 0.55
SMPD4-215ENST00000457039 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
SMPD4-215ENST00000457039 R3HDM1Q15032 1099 aaKnown RBP18.48■□□□□ 0.55
SMPD4-215ENST00000457039 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
SMPD4-215ENST00000457039 QSER1Q2KHR3 1735 aa18.47■□□□□ 0.55
SMPD4-215ENST00000457039 PSDA5PKW4 1024 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-215ENST00000457039 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
SMPD4-215ENST00000457039 ZNF521Q96K83 1311 aa18.47■□□□□ 0.55
SMPD4-215ENST00000457039 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
SMPD4-215ENST00000457039 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-215ENST00000457039 RC3H1Q5TC82 1133 aaKnown RBP18.46■□□□□ 0.55
SMPD4-215ENST00000457039 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-215ENST00000457039 MYH14Q7Z406 1995 aaKnown RBP18.45■□□□□ 0.54
SMPD4-215ENST00000457039 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
SMPD4-215ENST00000457039 AMIGO3Q86WK7 504 aa18.45■□□□□ 0.54
SMPD4-215ENST00000457039 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
SMPD4-215ENST00000457039 IL16Q14005 1332 aa18.45■□□□□ 0.54
SMPD4-215ENST00000457039 PNPLA7Q6ZV29 1317 aa18.45■□□□□ 0.54
SMPD4-215ENST00000457039 UBR3Q6ZT12 1888 aa18.44■□□□□ 0.54
SMPD4-215ENST00000457039 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-215ENST00000457039 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
SMPD4-215ENST00000457039 CRKLP46109 303 aaKnown RBP18.44■□□□□ 0.54
SMPD4-215ENST00000457039 GNAI1P63096 354 aa18.44■□□□□ 0.54
SMPD4-215ENST00000457039 INTS5Q6P9B9 1019 aaKnown RBP18.44■□□□□ 0.54
SMPD4-215ENST00000457039 WDR63Q8IWG1 891 aa18.44■□□□□ 0.54
SMPD4-215ENST00000457039 AK7Q96M32 723 aa18.44■□□□□ 0.54
SMPD4-215ENST00000457039 TEX13AQ9BXU3 409 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-215ENST00000457039 TFCP2L1Q9NZI6 479 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms