RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SPC24Q8NBT2 197 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 KIAA1524Q8TCG1 905 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 RILPL2Q969X0 211 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
CLIP4-208ENST00000456385 OSBPL3Q9H4L5 887 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 ABCC3O15438 1527 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 WDR33Q9C0J8 1336 aaKnown RBP12.44□□□□□ -0.42
CLIP4-208ENST00000456385 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLIP4-208ENST00000456385 IL25Q9H293 177 aa12.44□□□□□ -0.42
CLIP4-208ENST00000456385 TRIM6-TRIM34B2RNG4 842 aa12.44□□□□□ -0.42
CLIP4-208ENST00000456385 MCCP23508 829 aa12.44□□□□□ -0.42
CLIP4-208ENST00000456385 YTHDC2Q9H6S0 1430 aaKnown RBP12.43□□□□□ -0.42
CLIP4-208ENST00000456385 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
CLIP4-208ENST00000456385 CHMLP26374 656 aa12.43□□□□□ -0.42
CLIP4-208ENST00000456385 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
CLIP4-208ENST00000456385 TCHHQ07283 1943 aa12.43□□□□□ -0.42
CLIP4-208ENST00000456385 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
CLIP4-208ENST00000456385 F6X3S4 739 aa12.43□□□□□ -0.42
CLIP4-208ENST00000456385 SLC4A10Q6U841 1118 aa12.43□□□□□ -0.42
CLIP4-208ENST00000456385 UNC5CLQ8IV45 518 aa12.43□□□□□ -0.42
CLIP4-208ENST00000456385 ANKRD7Q92527 254 aa12.43□□□□□ -0.42
CLIP4-208ENST00000456385 ABCA9Q8IUA7 1624 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 FIBPO43427 364 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 ANAPC15P60006 121 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 TMEM87AQ8NBN3 555 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 KIDINS220Q9ULH0 1771 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
CLIP4-208ENST00000456385 FUCA2Q9BTY2 467 aa12.42□□□□□ -0.42
CLIP4-208ENST00000456385 PTPRMP28827 1452 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 UHRF1BP1LA0JNW5 1464 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 HMMRO75330 724 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 UBE2HP62256 183 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 FGD1P98174 961 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 CHAF1AQ13111 956 aaPredicted RBP12.41□□□□□ -0.42
CLIP4-208ENST00000456385 IDI1Q13907 227 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 MCM10Q7L590 875 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 DIAPH3Q9NSV4 1193 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 SALL3Q9BXA9 1300 aa12.41□□□□□ -0.42
CLIP4-208ENST00000456385 CTIFO43310 598 aaKnown RBP12.4□□□□□ -0.42
CLIP4-208ENST00000456385 ZSCAN22P10073 491 aaPredicted RBP12.4□□□□□ -0.42
CLIP4-208ENST00000456385 G2E3Q7L622 706 aa12.4□□□□□ -0.42
CLIP4-208ENST00000456385 NME9Q86XW9 330 aa12.4□□□□□ -0.42
CLIP4-208ENST00000456385 SYT1P21579 422 aa12.39□□□□□ -0.43
CLIP4-208ENST00000456385 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
CLIP4-208ENST00000456385 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
CLIP4-208ENST00000456385 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
CLIP4-208ENST00000456385 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
CLIP4-208ENST00000456385 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-208ENST00000456385 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-208ENST00000456385 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
CLIP4-208ENST00000456385 STX6O43752 255 aa12.38□□□□□ -0.43
CLIP4-208ENST00000456385 PTGS1P23219 599 aa12.38□□□□□ -0.43
CLIP4-208ENST00000456385 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
CLIP4-208ENST00000456385 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
CLIP4-208ENST00000456385 PTPRCP08575 1304 aa12.38□□□□□ -0.43
CLIP4-208ENST00000456385 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
CLIP4-208ENST00000456385 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
CLIP4-208ENST00000456385 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
CLIP4-208ENST00000456385 KIF20BQ96Q89 1820 aa12.37□□□□□ -0.43
CLIP4-208ENST00000456385 CHL1O00533 1208 aa12.37□□□□□ -0.43
CLIP4-208ENST00000456385 F13A1P00488 732 aa12.37□□□□□ -0.43
CLIP4-208ENST00000456385 LRMPQ12912 555 aa12.37□□□□□ -0.43
CLIP4-208ENST00000456385 C16orf45Q96MC5 204 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-208ENST00000456385 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
CLIP4-208ENST00000456385 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
CLIP4-208ENST00000456385 HSPA4P34932 840 aa12.37□□□□□ -0.43
CLIP4-208ENST00000456385 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-208ENST00000456385 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
CLIP4-208ENST00000456385 CPA1P15085 419 aa12.36□□□□□ -0.43
CLIP4-208ENST00000456385 AK2P54819 239 aa12.36□□□□□ -0.43
CLIP4-208ENST00000456385 RUFY3Q7L099 469 aa12.36□□□□□ -0.43
CLIP4-208ENST00000456385 ZNF771Q7L3S4 317 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-208ENST00000456385 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
CLIP4-208ENST00000456385 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
CLIP4-208ENST00000456385 GNAI2P04899 355 aa12.36□□□□□ -0.43
CLIP4-208ENST00000456385 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
CLIP4-208ENST00000456385 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
CLIP4-208ENST00000456385 ASXL2Q76L83 1435 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 FRMPD1Q5SYB0 1578 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 LARGE1O95461 756 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 CAMK4Q16566 473 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 LUZP1Q86V48 1076 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 FEZ1Q99689 392 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 OGFRQ9NZT2 677 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 NRBP1Q9UHY1 535 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 CTNNA3Q9UI47 895 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 POGZQ7Z3K3 1410 aa12.35□□□□□ -0.43
CLIP4-208ENST00000456385 ZBTB22O15209 634 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 GTF2E1P29083 439 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-208ENST00000456385 CCDC186Q7Z3E2 898 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 TTC14Q96N46 770 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 IL1RAPL2Q9NP60 686 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
CLIP4-208ENST00000456385 PIK3C2BO00750 1634 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms