RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
COMMD1-205ENST00000455659 PIGBQ92521 554 aa9.4□□□□□ -0.9
COMMD1-205ENST00000455659 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.9
COMMD1-205ENST00000455659 ERVV-2B6SEH9 535 aa9.39□□□□□ -0.91
COMMD1-205ENST00000455659 FCHSD2O94868 740 aa9.39□□□□□ -0.91
COMMD1-205ENST00000455659 CABP4P57796 275 aa9.39□□□□□ -0.91
COMMD1-205ENST00000455659 NBPF14Q5TI25 921 aa9.39□□□□□ -0.91
COMMD1-205ENST00000455659 SMARCC1Q92922 1105 aaPredicted RBP9.39□□□□□ -0.91
COMMD1-205ENST00000455659 GNAT3A8MTJ3 354 aa9.38□□□□□ -0.91
COMMD1-205ENST00000455659 ZNF827Q17R98 1081 aa9.38□□□□□ -0.91
COMMD1-205ENST00000455659 PROM2Q8N271 834 aa9.38□□□□□ -0.91
COMMD1-205ENST00000455659 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
COMMD1-205ENST00000455659 SLC52A2Q9HAB3 445 aa9.38□□□□□ -0.91
COMMD1-205ENST00000455659 LRRC4BQ9NT99 713 aa9.38□□□□□ -0.91
COMMD1-205ENST00000455659 STK32BQ9NY57 414 aa9.38□□□□□ -0.91
COMMD1-205ENST00000455659 CEMIPQ8WUJ3 1361 aa9.37□□□□□ -0.91
COMMD1-205ENST00000455659 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
COMMD1-205ENST00000455659 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
COMMD1-205ENST00000455659 KCNQ4P56696 695 aa9.37□□□□□ -0.91
COMMD1-205ENST00000455659 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
COMMD1-205ENST00000455659 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
COMMD1-205ENST00000455659 SIK1P57059 783 aa9.36□□□□□ -0.91
COMMD1-205ENST00000455659 PNNQ9H307 717 aaKnown RBP9.36□□□□□ -0.91
COMMD1-205ENST00000455659 ATG3Q9NT62 314 aa9.36□□□□□ -0.91
COMMD1-205ENST00000455659 COL24A1Q17RW2 1714 aa9.36□□□□□ -0.91
COMMD1-205ENST00000455659 TEFQ10587 303 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 SLC15A2Q16348 729 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
COMMD1-205ENST00000455659 PLEKHF1Q96S99 279 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 LGR6Q9HBX8 967 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 MRS2Q9HD23 443 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 SCN7AQ01118 1682 aa9.35□□□□□ -0.91
COMMD1-205ENST00000455659 NFE2L2Q16236 605 aa9.34□□□□□ -0.91
COMMD1-205ENST00000455659 MCM10Q7L590 875 aa9.34□□□□□ -0.91
COMMD1-205ENST00000455659 LINC00116Q8NCU8 138 aa9.34□□□□□ -0.91
COMMD1-205ENST00000455659 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
COMMD1-205ENST00000455659 AK7Q96M32 723 aa9.34□□□□□ -0.91
COMMD1-205ENST00000455659 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
COMMD1-205ENST00000455659 GOLGB1Q14789 3259 aaKnown RBP9.33□□□□□ -0.92
COMMD1-205ENST00000455659 PTCD1O75127 700 aaKnown RBP9.33□□□□□ -0.92
COMMD1-205ENST00000455659 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
COMMD1-205ENST00000455659 LMOD3Q0VAK6 560 aa9.33□□□□□ -0.92
COMMD1-205ENST00000455659 SLC39A6Q13433 755 aa9.33□□□□□ -0.92
COMMD1-205ENST00000455659 ITPK1Q13572 414 aa9.33□□□□□ -0.92
COMMD1-205ENST00000455659 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
COMMD1-205ENST00000455659 IL17REQ8NFR9 667 aa9.33□□□□□ -0.92
COMMD1-205ENST00000455659 TFCP2L1Q9NZI6 479 aa9.33□□□□□ -0.92
COMMD1-205ENST00000455659 PNPLA7Q6ZV29 1317 aa9.32□□□□□ -0.92
COMMD1-205ENST00000455659 CNTNAP4Q9C0A0 1308 aa9.32□□□□□ -0.92
COMMD1-205ENST00000455659 BCORQ6W2J9 1755 aa9.32□□□□□ -0.92
COMMD1-205ENST00000455659 HMGB2P26583 209 aaKnown RBP9.32□□□□□ -0.92
COMMD1-205ENST00000455659 DCTN1Q14203 1278 aa9.32□□□□□ -0.92
COMMD1-205ENST00000455659 CCDC184Q52MB2 194 aa9.32□□□□□ -0.92
COMMD1-205ENST00000455659 ADAMTS8Q9UP79 889 aa9.32□□□□□ -0.92
COMMD1-205ENST00000455659 GNPATO15228 680 aa9.31□□□□□ -0.92
COMMD1-205ENST00000455659 HTATSF1O43719 755 aaKnown RBP9.31□□□□□ -0.92
COMMD1-205ENST00000455659 PHF14O94880 888 aa9.31□□□□□ -0.92
COMMD1-205ENST00000455659 ZBTB7AO95365 584 aa9.31□□□□□ -0.92
COMMD1-205ENST00000455659 RUNDC1Q96C34 613 aa9.31□□□□□ -0.92
COMMD1-205ENST00000455659 SLC4A9Q96Q91 983 aa9.31□□□□□ -0.92
COMMD1-205ENST00000455659 THUMPD2Q9BTF0 503 aaKnown RBP9.31□□□□□ -0.92
COMMD1-205ENST00000455659 PDGFDQ9GZP0 370 aaPredicted RBP9.31□□□□□ -0.92
COMMD1-205ENST00000455659 RRP7AQ9Y3A4 280 aaKnown RBP9.31□□□□□ -0.92
COMMD1-205ENST00000455659 HEG1Q9ULI3 1381 aa9.3□□□□□ -0.92
COMMD1-205ENST00000455659 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
COMMD1-205ENST00000455659 TMPOP42166 694 aaKnown RBP9.3□□□□□ -0.92
COMMD1-205ENST00000455659 RIPK4P57078 832 aa9.3□□□□□ -0.92
COMMD1-205ENST00000455659 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
COMMD1-205ENST00000455659 MSH5O43196 834 aa9.29□□□□□ -0.92
COMMD1-205ENST00000455659 SSFA2P28290 1259 aa9.29□□□□□ -0.92
COMMD1-205ENST00000455659 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
COMMD1-205ENST00000455659 AMIGO3Q86WK7 504 aa9.29□□□□□ -0.92
COMMD1-205ENST00000455659 DNAJC10Q8IXB1 793 aa9.29□□□□□ -0.92
COMMD1-205ENST00000455659 FMNL2Q96PY5 1086 aa9.29□□□□□ -0.92
COMMD1-205ENST00000455659 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
COMMD1-205ENST00000455659 COL15A1P39059 1388 aa9.28□□□□□ -0.92
COMMD1-205ENST00000455659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.28□□□□□ -0.92
COMMD1-205ENST00000455659 CRKLP46109 303 aaKnown RBP9.28□□□□□ -0.92
COMMD1-205ENST00000455659 ZNF496Q96IT1 587 aaPredicted RBP9.28□□□□□ -0.92
COMMD1-205ENST00000455659 SPON1Q9HCB6 807 aa9.28□□□□□ -0.92
COMMD1-205ENST00000455659 ADRA2BP18089 450 aa9.27□□□□□ -0.93
COMMD1-205ENST00000455659 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
COMMD1-205ENST00000455659 COL23A1Q86Y22 540 aaPredicted RBP9.27□□□□□ -0.93
COMMD1-205ENST00000455659 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
COMMD1-205ENST00000455659 FLAD1Q8NFF5 587 aa9.27□□□□□ -0.93
COMMD1-205ENST00000455659 PNISRQ8TF01 805 aaKnown RBP9.27□□□□□ -0.93
COMMD1-205ENST00000455659 CCDC87Q9NVE4 849 aa9.27□□□□□ -0.93
COMMD1-205ENST00000455659 PPP1R1BQ9UD71 204 aaPredicted RBP9.27□□□□□ -0.93
COMMD1-205ENST00000455659 RTCBQ9Y3I0 505 aaKnown RBP9.27□□□□□ -0.93
COMMD1-205ENST00000455659 UTRNP46939 3433 aa9.27□□□□□ -0.93
COMMD1-205ENST00000455659 APAF1O14727 1248 aa9.26□□□□□ -0.93
COMMD1-205ENST00000455659 KCNQ3O43525 872 aa9.26□□□□□ -0.93
COMMD1-205ENST00000455659 TAF7Q15545 349 aaPredicted RBP9.26□□□□□ -0.93
COMMD1-205ENST00000455659 SMIM5Q71RC9 77 aa9.26□□□□□ -0.93
COMMD1-205ENST00000455659 SLC16A10Q8TF71 515 aa9.26□□□□□ -0.93
COMMD1-205ENST00000455659 TSPYL4Q9UJ04 414 aa9.26□□□□□ -0.93
COMMD1-205ENST00000455659 ATF5Q9Y2D1 282 aaPredicted RBP9.26□□□□□ -0.93
COMMD1-205ENST00000455659 ZBTB1Q9Y2K1 713 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms