RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 IL17REQ8NFR9 667 aa20.7■□□□□ 0.91
RFC5-204ENST00000454402 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.91
RFC5-204ENST00000454402 TEFQ10587 303 aa20.7■□□□□ 0.9
RFC5-204ENST00000454402 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
RFC5-204ENST00000454402 SLC52A2Q9HAB3 445 aa20.7■□□□□ 0.9
RFC5-204ENST00000454402 RGPD3A6NKT7 1758 aaPredicted RBP20.69■□□□□ 0.9
RFC5-204ENST00000454402 RGPD4Q7Z3J3 1758 aa20.69■□□□□ 0.9
RFC5-204ENST00000454402 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
RFC5-204ENST00000454402 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
RFC5-204ENST00000454402 SLC39A6Q13433 755 aa20.68■□□□□ 0.9
RFC5-204ENST00000454402 NFE2L2Q16236 605 aa20.68■□□□□ 0.9
RFC5-204ENST00000454402 STK32BQ9NY57 414 aa20.67■□□□□ 0.9
RFC5-204ENST00000454402 SLC27A3Q5K4L6 730 aa20.67■□□□□ 0.9
RFC5-204ENST00000454402 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
RFC5-204ENST00000454402 RUNDC1Q96C34 613 aa20.66■□□□□ 0.9
RFC5-204ENST00000454402 THUMPD2Q9BTF0 503 aaKnown RBP20.66■□□□□ 0.9
RFC5-204ENST00000454402 LOC102724428A0A0B4J2F2 783 aa20.65■□□□□ 0.9
RFC5-204ENST00000454402 ATP6V1AP38606 617 aa20.65■□□□□ 0.9
RFC5-204ENST00000454402 SIK1P57059 783 aa20.65■□□□□ 0.9
RFC5-204ENST00000454402 RIPK4P57078 832 aa20.65■□□□□ 0.9
RFC5-204ENST00000454402 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
RFC5-204ENST00000454402 VIRMAQ69YN4 1812 aaKnown RBP20.65■□□□□ 0.9
RFC5-204ENST00000454402 LY75O60449 1722 aa20.65■□□□□ 0.9
RFC5-204ENST00000454402 FAM9BQ8IZU0 186 aa20.64■□□□□ 0.9
RFC5-204ENST00000454402 TMPOP42166 694 aaKnown RBP20.63■□□□□ 0.89
RFC5-204ENST00000454402 SLC15A2Q16348 729 aa20.63■□□□□ 0.89
RFC5-204ENST00000454402 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
RFC5-204ENST00000454402 MRC1P22897 1456 aa20.61■□□□□ 0.89
RFC5-204ENST00000454402 BTBD11A6QL63 1104 aa20.61■□□□□ 0.89
RFC5-204ENST00000454402 ITPK1Q13572 414 aa20.61■□□□□ 0.89
RFC5-204ENST00000454402 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
RFC5-204ENST00000454402 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
RFC5-204ENST00000454402 TFCP2L1Q9NZI6 479 aa20.61■□□□□ 0.89
RFC5-204ENST00000454402 SLC4A9Q96Q91 983 aa20.61■□□□□ 0.89
RFC5-204ENST00000454402 PDGFDQ9GZP0 370 aaPredicted RBP20.61■□□□□ 0.89
RFC5-204ENST00000454402 ADAMTS7Q9UKP4 1686 aa20.6■□□□□ 0.89
RFC5-204ENST00000454402 CEMIPQ8WUJ3 1361 aa20.6■□□□□ 0.89
RFC5-204ENST00000454402 DLG5Q8TDM6 1919 aa20.6■□□□□ 0.89
RFC5-204ENST00000454402 APAF1O14727 1248 aa20.6■□□□□ 0.89
RFC5-204ENST00000454402 LINC00116Q8NCU8 138 aa20.6■□□□□ 0.89
RFC5-204ENST00000454402 MSH5O43196 834 aa20.59■□□□□ 0.89
RFC5-204ENST00000454402 KCNQ3O43525 872 aa20.59■□□□□ 0.89
RFC5-204ENST00000454402 HTATSF1O43719 755 aaKnown RBP20.59■□□□□ 0.89
RFC5-204ENST00000454402 SMIM5Q71RC9 77 aa20.59■□□□□ 0.89
RFC5-204ENST00000454402 AK7Q96M32 723 aa20.58■□□□□ 0.89
RFC5-204ENST00000454402 PAPPAQ13219 1627 aa20.58■□□□□ 0.89
RFC5-204ENST00000454402 C5P01031 1676 aa20.58■□□□□ 0.88
RFC5-204ENST00000454402 AKT1S1Q96B36 256 aa20.58■□□□□ 0.88
RFC5-204ENST00000454402 PHF14O94880 888 aa20.57■□□□□ 0.88
RFC5-204ENST00000454402 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
RFC5-204ENST00000454402 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
RFC5-204ENST00000454402 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
RFC5-204ENST00000454402 LMOD3Q0VAK6 560 aa20.55■□□□□ 0.88
RFC5-204ENST00000454402 TAF7Q15545 349 aaPredicted RBP20.55■□□□□ 0.88
RFC5-204ENST00000454402 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
RFC5-204ENST00000454402 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
RFC5-204ENST00000454402 MIER1Q8N108 512 aa20.54■□□□□ 0.88
RFC5-204ENST00000454402 GNPATO15228 680 aa20.54■□□□□ 0.88
RFC5-204ENST00000454402 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
RFC5-204ENST00000454402 TRIM35Q9UPQ4 493 aa20.54■□□□□ 0.88
RFC5-204ENST00000454402 SIPA1L3O60292 1781 aaPredicted RBP20.53■□□□□ 0.88
RFC5-204ENST00000454402 KCPQ6ZWJ8 1503 aa20.53■□□□□ 0.88
RFC5-204ENST00000454402 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
RFC5-204ENST00000454402 TAF1LQ8IZX4 1826 aa20.52■□□□□ 0.88
RFC5-204ENST00000454402 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.87
RFC5-204ENST00000454402 AMIGO3Q86WK7 504 aa20.51■□□□□ 0.87
RFC5-204ENST00000454402 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
RFC5-204ENST00000454402 ATF5Q9Y2D1 282 aaPredicted RBP20.51■□□□□ 0.87
RFC5-204ENST00000454402 TSPYL4Q9UJ04 414 aa20.5■□□□□ 0.87
RFC5-204ENST00000454402 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
RFC5-204ENST00000454402 CRKLP46109 303 aaKnown RBP20.49■□□□□ 0.87
RFC5-204ENST00000454402 TUBGCP6Q96RT7 1819 aa20.49■□□□□ 0.87
RFC5-204ENST00000454402 TJP1Q07157 1748 aa20.49■□□□□ 0.87
RFC5-204ENST00000454402 COL23A1Q86Y22 540 aaPredicted RBP20.48■□□□□ 0.87
RFC5-204ENST00000454402 HEG1Q9ULI3 1381 aa20.48■□□□□ 0.87
RFC5-204ENST00000454402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.48■□□□□ 0.87
RFC5-204ENST00000454402 MSL1Q68DK7 614 aa20.47■□□□□ 0.87
RFC5-204ENST00000454402 RTCBQ9Y3I0 505 aaKnown RBP20.47■□□□□ 0.87
RFC5-204ENST00000454402 ZNF330Q9Y3S2 320 aaPredicted RBP20.47■□□□□ 0.87
RFC5-204ENST00000454402 SRCAPQ6ZRS2 3230 aa20.47■□□□□ 0.87
RFC5-204ENST00000454402 UBR2Q8IWV8 1755 aa20.47■□□□□ 0.87
RFC5-204ENST00000454402 CCER2I3L3R5 266 aa20.46■□□□□ 0.87
RFC5-204ENST00000454402 CYP19A1P11511 503 aaPredicted RBP20.46■□□□□ 0.87
RFC5-204ENST00000454402 HMGB2P26583 209 aaKnown RBP20.46■□□□□ 0.87
RFC5-204ENST00000454402 CANXP27824 592 aaKnown RBP20.46■□□□□ 0.87
RFC5-204ENST00000454402 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.86
RFC5-204ENST00000454402 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
RFC5-204ENST00000454402 CASZ1Q86V15 1759 aa20.45■□□□□ 0.86
RFC5-204ENST00000454402 COL5A3P25940 1745 aaPredicted RBP20.45■□□□□ 0.86
RFC5-204ENST00000454402 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
RFC5-204ENST00000454402 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
RFC5-204ENST00000454402 STARD3NLO95772 234 aa20.44■□□□□ 0.86
RFC5-204ENST00000454402 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
RFC5-204ENST00000454402 SPON1Q9HCB6 807 aa20.44■□□□□ 0.86
RFC5-204ENST00000454402 ZBTB1Q9Y2K1 713 aa20.44■□□□□ 0.86
RFC5-204ENST00000454402 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
RFC5-204ENST00000454402 TRAPPC3LQ5T215 181 aa20.43■□□□□ 0.86
RFC5-204ENST00000454402 ZNF831Q5JPB2 1677 aa20.43■□□□□ 0.86
RFC5-204ENST00000454402 A1BGP04217 495 aa20.42■□□□□ 0.86
RFC5-204ENST00000454402 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms