RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 ZSCAN29Q8IWY8 852 aaPredicted RBP7.78□□□□□ -1.16
HCG18-239ENST00000454129 CNKSR2Q8WXI2 1034 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 TMOD3Q9NYL9 352 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 ADGRL1O94910 1474 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 DNAAF4Q8WXU2 420 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 AIDAQ96BJ3 306 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 ZHX3Q9H4I2 956 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 CFAP45Q9UL16 551 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 PPP6R1Q9UPN7 881 aa7.78□□□□□ -1.16
HCG18-239ENST00000454129 TRIM27P14373 513 aa7.77□□□□□ -1.16
HCG18-239ENST00000454129 FBLN1P23142 703 aa7.77□□□□□ -1.16
HCG18-239ENST00000454129 CCDC8Q9H0W5 538 aaPredicted RBP7.77□□□□□ -1.16
HCG18-239ENST00000454129 C14orf93Q9H972 538 aaKnown RBP7.77□□□□□ -1.16
HCG18-239ENST00000454129 CEP170Q5SW79 1584 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 RAB11FIP3O75154 756 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 CDKL5O76039 1030 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 PIP4K2AP48426 406 aaPredicted RBP7.77□□□□□ -1.17
HCG18-239ENST00000454129 PRPF40BQ6NWY9 871 aaKnown RBP7.77□□□□□ -1.17
HCG18-239ENST00000454129 CAGE1Q8TC20 777 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 PIBF1Q8WXW3 757 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 MAP7D2Q96T17 732 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 DBF4Q9UBU7 674 aaPredicted RBP7.77□□□□□ -1.17
HCG18-239ENST00000454129 LRRFIP2Q9Y608 721 aaKnown RBP7.77□□□□□ -1.17
HCG18-239ENST00000454129 PBRM1Q86U86 1689 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 CCDC173Q0VFZ6 552 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 IMMTQ16891 758 aaKnown RBP7.77□□□□□ -1.17
HCG18-239ENST00000454129 SMARCE1Q969G3 411 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 ADAMTS2O95450 1211 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
HCG18-239ENST00000454129 U3KPZ7 1027 aaPredicted RBP7.77□□□□□ -1.17
HCG18-239ENST00000454129 IFIT1P09914 478 aaKnown RBP7.76□□□□□ -1.17
HCG18-239ENST00000454129 FLIIQ13045 1269 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 ZMYND15Q9H091 742 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 GRPEL1Q9HAV7 217 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 NOL7Q9UMY1 257 aaKnown RBP7.76□□□□□ -1.17
HCG18-239ENST00000454129 AKAP2Q9Y2D5 859 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 A0A087WZG4 1122 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 SSBP05455 408 aaKnown RBP eCLIP7.76□□□□□ -1.17
HCG18-239ENST00000454129 CCDC83Q8IWF9 413 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 ACBD3Q9H3P7 528 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 LRPPRCP42704 1394 aaKnown RBP7.76□□□□□ -1.17
HCG18-239ENST00000454129 NUP160Q12769 1436 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 FAM83GA6ND36 823 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 PATL2C9JE40 543 aaKnown RBP7.76□□□□□ -1.17
HCG18-239ENST00000454129 IFIT5Q13325 482 aaKnown RBP7.76□□□□□ -1.17
HCG18-239ENST00000454129 TMEM132AQ24JP5 1023 aa7.76□□□□□ -1.17
HCG18-239ENST00000454129 RRAGDQ9NQL2 400 aaPredicted RBP7.76□□□□□ -1.17
HCG18-239ENST00000454129 ZNHIT6Q9NWK9 470 aaKnown RBP7.76□□□□□ -1.17
HCG18-239ENST00000454129 MINDY4BA8MYZ0 360 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 STIM1Q13586 685 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 FILIP1Q7Z7B0 1213 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 NUP62CLQ9H1M0 184 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 NOS1P29475 1434 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 NKTRP30414 1462 aaKnown RBP7.75□□□□□ -1.17
HCG18-239ENST00000454129 PPFIBP1Q86W92 1011 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 AK7Q96M32 723 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 TRMT112Q9UI30 125 aaKnown RBP7.75□□□□□ -1.17
HCG18-239ENST00000454129 CDR1P51861 262 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 ZBTB3Q9H5J0 574 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 ZNF652Q9Y2D9 606 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 HMGN5P82970 282 aaKnown RBP7.75□□□□□ -1.17
HCG18-239ENST00000454129 HSP90AB2PQ58FF8 381 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 KRT28Q7Z3Y7 464 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 HYPKQ9NX55 129 aa7.75□□□□□ -1.17
HCG18-239ENST00000454129 ANXA1P04083 346 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 SETQ01105 290 aaPredicted RBP7.74□□□□□ -1.17
HCG18-239ENST00000454129 MTERF4Q7Z6M4 381 aaKnown RBP7.74□□□□□ -1.17
HCG18-239ENST00000454129 CEP57L1Q8IYX8 460 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 ACEP12821 1306 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 PI4KAP2A4QPH2 592 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
HCG18-239ENST00000454129 GPTP24298 496 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 PI4KAP1Q8N8J0 262 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 BMP2KQ9NSY1 1161 aaPredicted RBP7.74□□□□□ -1.17
HCG18-239ENST00000454129 DACH1Q9UI36 760 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 RPRD2Q5VT52 1461 aaKnown RBP7.74□□□□□ -1.17
HCG18-239ENST00000454129 DISP1Q96F81 1524 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 ZPR1O75312 459 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 USP5P45974 858 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 CAVIN4Q5BKX8 364 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 FAM177A1Q8N128 213 aaPredicted RBP7.74□□□□□ -1.17
HCG18-239ENST00000454129 NAPBQ9H115 298 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 E9PCH4 1651 aa7.74□□□□□ -1.17
HCG18-239ENST00000454129 VIRMAQ69YN4 1812 aaKnown RBP7.73□□□□□ -1.17
HCG18-239ENST00000454129 ATP5J2-PTCD1G3V325 749 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 EXOC5O00471 708 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 CCP110O43303 1012 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 TANGO6Q9C0B7 1094 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 MBIPQ9NS73 344 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 ATP10BO94823 1461 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 SCAF11Q99590 1463 aaKnown RBP7.73□□□□□ -1.17
HCG18-239ENST00000454129 SYCP1Q15431 976 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 WASF1Q92558 559 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 PDCL3Q9H2J4 239 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 FBXO3Q9UK99 471 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 MAGI3Q5TCQ9 1506 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 CHRNA2Q15822 529 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 DEF6Q9H4E7 631 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 ECHDC1Q9NTX5 307 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms