RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 CRB1P82279 1406 aa19.15■□□□□ 0.66
TRA2B-205ENST00000453386 MBD3O95983 291 aa19.14■□□□□ 0.66
TRA2B-205ENST00000453386 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.66
TRA2B-205ENST00000453386 FKBP5Q13451 457 aaPredicted RBP19.14■□□□□ 0.66
TRA2B-205ENST00000453386 PNMA6EA0A0J9YXQ4 647 aa19.14■□□□□ 0.65
TRA2B-205ENST00000453386 BRD1O95696 1058 aa19.13■□□□□ 0.65
TRA2B-205ENST00000453386 FAM69CQ0P6D2 419 aa19.13■□□□□ 0.65
TRA2B-205ENST00000453386 UPF3BQ9BZI7 483 aaKnown RBP19.13■□□□□ 0.65
TRA2B-205ENST00000453386 MAP3K19Q56UN5 1328 aa19.13■□□□□ 0.65
TRA2B-205ENST00000453386 CHMLP26374 656 aa19.13■□□□□ 0.65
TRA2B-205ENST00000453386 HDGFP51858 240 aaKnown RBP19.12■□□□□ 0.65
TRA2B-205ENST00000453386 ESF1Q9H501 851 aaKnown RBP19.12■□□□□ 0.65
TRA2B-205ENST00000453386 SIRT1Q96EB6 747 aa19.12■□□□□ 0.65
TRA2B-205ENST00000453386 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.12■□□□□ 0.65
TRA2B-205ENST00000453386 GNAI3P08754 354 aa19.11■□□□□ 0.65
TRA2B-205ENST00000453386 FLIIQ13045 1269 aa19.11■□□□□ 0.65
TRA2B-205ENST00000453386 CUL4AQ13619 759 aa19.11■□□□□ 0.65
TRA2B-205ENST00000453386 SETD1AO15047 1707 aaKnown RBP19.1■□□□□ 0.65
TRA2B-205ENST00000453386 ZNF500O60304 480 aaPredicted RBP19.1■□□□□ 0.65
TRA2B-205ENST00000453386 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
TRA2B-205ENST00000453386 GDPD2Q9HCC8 539 aa19.1■□□□□ 0.65
TRA2B-205ENST00000453386 ZKSCAN5Q9Y2L8 839 aa19.1■□□□□ 0.65
TRA2B-205ENST00000453386 ATP8B2P98198 1209 aa19.1■□□□□ 0.65
TRA2B-205ENST00000453386 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
TRA2B-205ENST00000453386 MON2Q7Z3U7 1717 aa19.09■□□□□ 0.65
TRA2B-205ENST00000453386 SALL3Q9BXA9 1300 aa19.09■□□□□ 0.65
TRA2B-205ENST00000453386 ANAPC15P60006 121 aa19.09■□□□□ 0.65
TRA2B-205ENST00000453386 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
TRA2B-205ENST00000453386 CCDC39Q9UFE4 941 aa19.09■□□□□ 0.65
TRA2B-205ENST00000453386 LRRFIP2Q9Y608 721 aaKnown RBP19.09■□□□□ 0.65
TRA2B-205ENST00000453386 C3P01024 1663 aa19.09■□□□□ 0.65
TRA2B-205ENST00000453386 INTS4Q96HW7 963 aaKnown RBP19.08■□□□□ 0.65
TRA2B-205ENST00000453386 PDCL3Q9H2J4 239 aa19.08■□□□□ 0.65
TRA2B-205ENST00000453386 IL1RAPL2Q9NP60 686 aa19.08■□□□□ 0.65
TRA2B-205ENST00000453386 ROBO2Q9HCK4 1378 aa19.08■□□□□ 0.65
TRA2B-205ENST00000453386 PTMAP06454 111 aaKnown RBP19.08■□□□□ 0.64
TRA2B-205ENST00000453386 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.64
TRA2B-205ENST00000453386 CCDC30Q5VVM6 783 aa19.08■□□□□ 0.64
TRA2B-205ENST00000453386 TSPY26PQ9H489 355 aa19.08■□□□□ 0.64
TRA2B-205ENST00000453386 SYAP1Q96A49 352 aaPredicted RBP19.08■□□□□ 0.64
TRA2B-205ENST00000453386 AMPHP49418 695 aa19.07■□□□□ 0.64
TRA2B-205ENST00000453386 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
TRA2B-205ENST00000453386 OVOS2A0A0J9YW53 1432 aa19.07■□□□□ 0.64
TRA2B-205ENST00000453386 OVOS2Q6IE36 1432 aa19.07■□□□□ 0.64
TRA2B-205ENST00000453386 NRKQ7Z2Y5 1582 aa19.06■□□□□ 0.64
TRA2B-205ENST00000453386 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
TRA2B-205ENST00000453386 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
TRA2B-205ENST00000453386 NRXN3Q9Y4C0 1643 aa19.06■□□□□ 0.64
TRA2B-205ENST00000453386 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
TRA2B-205ENST00000453386 SRCIN1Q9C0H9 1055 aa19.06■□□□□ 0.64
TRA2B-205ENST00000453386 GADD45BO75293 160 aaPredicted RBP19.05■□□□□ 0.64
TRA2B-205ENST00000453386 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
TRA2B-205ENST00000453386 EYA1Q99502 592 aa19.05■□□□□ 0.64
TRA2B-205ENST00000453386 TERF1P54274 439 aa19.05■□□□□ 0.64
TRA2B-205ENST00000453386 ZMYND15Q9H091 742 aa19.05■□□□□ 0.64
TRA2B-205ENST00000453386 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
TRA2B-205ENST00000453386 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
TRA2B-205ENST00000453386 STAP2Q9UGK3 403 aa19.05■□□□□ 0.64
TRA2B-205ENST00000453386 TECPR2O15040 1411 aa19.04■□□□□ 0.64
TRA2B-205ENST00000453386 MCM5P33992 734 aa19.04■□□□□ 0.64
TRA2B-205ENST00000453386 USP48Q86UV5 1035 aa19.04■□□□□ 0.64
TRA2B-205ENST00000453386 USP6P35125 1406 aa19.04■□□□□ 0.64
TRA2B-205ENST00000453386 UBTFL1P0CB47 393 aaPredicted RBP19.04■□□□□ 0.64
TRA2B-205ENST00000453386 CSPP1Q1MSJ5 1256 aa19.04■□□□□ 0.64
TRA2B-205ENST00000453386 IL25Q9H293 177 aa19.04■□□□□ 0.64
TRA2B-205ENST00000453386 AKAP12Q02952 1782 aa19.03■□□□□ 0.64
TRA2B-205ENST00000453386 UQCRHLA0A096LP55 91 aa19.03■□□□□ 0.64
TRA2B-205ENST00000453386 UQCRHP07919 91 aa19.03■□□□□ 0.64
TRA2B-205ENST00000453386 WDR33Q9C0J8 1336 aaKnown RBP19.03■□□□□ 0.64
TRA2B-205ENST00000453386 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
TRA2B-205ENST00000453386 PHF14O94880 888 aa19.02■□□□□ 0.64
TRA2B-205ENST00000453386 USP44Q9H0E7 712 aa19.02■□□□□ 0.64
TRA2B-205ENST00000453386 SURF6O75683 361 aaKnown RBP19.02■□□□□ 0.63
TRA2B-205ENST00000453386 USP31Q70CQ4 1352 aa19.02■□□□□ 0.63
TRA2B-205ENST00000453386 MPNDQ8N594 471 aa19.02■□□□□ 0.63
TRA2B-205ENST00000453386 FLT4P35916 1363 aa19.01■□□□□ 0.63
TRA2B-205ENST00000453386 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
TRA2B-205ENST00000453386 NGDNQ8NEJ9 315 aaKnown RBP19.01■□□□□ 0.63
TRA2B-205ENST00000453386 LARP6Q9BRS8 491 aaKnown RBP19.01■□□□□ 0.63
TRA2B-205ENST00000453386 PEAK1Q9H792 1746 aa19.01■□□□□ 0.63
TRA2B-205ENST00000453386 SSH2Q76I76 1423 aa19■□□□□ 0.63
TRA2B-205ENST00000453386 HSPA4P34932 840 aa19■□□□□ 0.63
TRA2B-205ENST00000453386 AGLP35573 1532 aa18.99■□□□□ 0.63
TRA2B-205ENST00000453386 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
TRA2B-205ENST00000453386 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
TRA2B-205ENST00000453386 SLC26A8Q96RN1 970 aa18.99■□□□□ 0.63
TRA2B-205ENST00000453386 SBNO1A3KN83 1393 aa18.98■□□□□ 0.63
TRA2B-205ENST00000453386 IGSF1Q8N6C5 1336 aa18.98■□□□□ 0.63
TRA2B-205ENST00000453386 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
TRA2B-205ENST00000453386 PHAXQ9H814 394 aaKnown RBP18.98■□□□□ 0.63
TRA2B-205ENST00000453386 HDGFL1Q5TGJ6 251 aa18.97■□□□□ 0.63
TRA2B-205ENST00000453386 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
TRA2B-205ENST00000453386 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
TRA2B-205ENST00000453386 IL17REQ8NFR9 667 aa18.97■□□□□ 0.63
TRA2B-205ENST00000453386 SSH3Q8TE77 659 aa18.97■□□□□ 0.63
TRA2B-205ENST00000453386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRA2B-205ENST00000453386 KDRP35968 1356 aa18.97■□□□□ 0.63
TRA2B-205ENST00000453386 KIAA2012Q0VF49 1180 aa18.96■□□□□ 0.63
TRA2B-205ENST00000453386 DNTTIP2Q5QJE6 756 aaKnown RBP18.96■□□□□ 0.63
TRA2B-205ENST00000453386 NUTM2GQ5VZR2 741 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms