RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 THUMPD2Q9BTF0 503 aaKnown RBP21.72■■□□□ 1.07
ALMS1P1-202ENST00000450720 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
ALMS1P1-202ENST00000450720 LMOD3Q0VAK6 560 aa21.71■■□□□ 1.07
ALMS1P1-202ENST00000450720 CAMKK2Q96RR4 588 aa21.71■■□□□ 1.07
ALMS1P1-202ENST00000450720 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
ALMS1P1-202ENST00000450720 PALLDQ8WX93 1383 aa21.7■■□□□ 1.06
ALMS1P1-202ENST00000450720 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
ALMS1P1-202ENST00000450720 ADAMTS7Q9UKP4 1686 aa21.69■■□□□ 1.06
ALMS1P1-202ENST00000450720 DLG5Q8TDM6 1919 aa21.69■■□□□ 1.06
ALMS1P1-202ENST00000450720 MRC1P22897 1456 aa21.69■■□□□ 1.06
ALMS1P1-202ENST00000450720 ATG3Q9NT62 314 aa21.69■■□□□ 1.06
ALMS1P1-202ENST00000450720 TXNRD1Q16881 649 aa21.68■■□□□ 1.06
ALMS1P1-202ENST00000450720 VIRMAQ69YN4 1812 aaKnown RBP21.67■■□□□ 1.06
ALMS1P1-202ENST00000450720 SLC39A6Q13433 755 aa21.67■■□□□ 1.06
ALMS1P1-202ENST00000450720 SALL2Q9Y467 1007 aaPredicted RBP21.67■■□□□ 1.06
ALMS1P1-202ENST00000450720 KCNQ4P56696 695 aa21.66■■□□□ 1.06
ALMS1P1-202ENST00000450720 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
ALMS1P1-202ENST00000450720 TRIM35Q9UPQ4 493 aa21.66■■□□□ 1.06
ALMS1P1-202ENST00000450720 BTBD11A6QL63 1104 aa21.66■■□□□ 1.06
ALMS1P1-202ENST00000450720 PTCD1O75127 700 aaKnown RBP21.66■■□□□ 1.06
ALMS1P1-202ENST00000450720 PROM2Q8N271 834 aa21.66■■□□□ 1.06
ALMS1P1-202ENST00000450720 CCNL1Q9UK58 526 aaPredicted RBP21.66■■□□□ 1.06
ALMS1P1-202ENST00000450720 TTC5Q8N0Z6 440 aa21.65■■□□□ 1.06
ALMS1P1-202ENST00000450720 TAF7Q15545 349 aaPredicted RBP21.63■■□□□ 1.05
ALMS1P1-202ENST00000450720 MIS18AQ9NYP9 233 aa21.63■■□□□ 1.05
ALMS1P1-202ENST00000450720 RGPD3A6NKT7 1758 aaPredicted RBP21.63■■□□□ 1.05
ALMS1P1-202ENST00000450720 RGPD4Q7Z3J3 1758 aa21.63■■□□□ 1.05
ALMS1P1-202ENST00000450720 LOC102724428A0A0B4J2F2 783 aa21.62■■□□□ 1.05
ALMS1P1-202ENST00000450720 SIK1P57059 783 aa21.62■■□□□ 1.05
ALMS1P1-202ENST00000450720 SLC27A3Q5K4L6 730 aa21.62■■□□□ 1.05
ALMS1P1-202ENST00000450720 LRRC4BQ9NT99 713 aa21.62■■□□□ 1.05
ALMS1P1-202ENST00000450720 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
ALMS1P1-202ENST00000450720 ATP6V1AP38606 617 aa21.61■■□□□ 1.05
ALMS1P1-202ENST00000450720 ZNF790Q6PG37 636 aa21.61■■□□□ 1.05
ALMS1P1-202ENST00000450720 LY75O60449 1722 aa21.59■■□□□ 1.05
ALMS1P1-202ENST00000450720 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
ALMS1P1-202ENST00000450720 KCNQ3O43525 872 aa21.58■■□□□ 1.05
ALMS1P1-202ENST00000450720 RREB1Q92766 1687 aa21.58■■□□□ 1.05
ALMS1P1-202ENST00000450720 TSPYL4Q9UJ04 414 aa21.58■■□□□ 1.04
ALMS1P1-202ENST00000450720 PAPPAQ13219 1627 aa21.57■■□□□ 1.04
ALMS1P1-202ENST00000450720 CALD1Q05682 793 aaKnown RBP21.57■■□□□ 1.04
ALMS1P1-202ENST00000450720 NBPF14Q5TI25 921 aa21.57■■□□□ 1.04
ALMS1P1-202ENST00000450720 WWC1Q8IX03 1113 aa21.57■■□□□ 1.04
ALMS1P1-202ENST00000450720 CCDC27Q2M243 656 aa21.56■■□□□ 1.04
ALMS1P1-202ENST00000450720 ZNF496Q96IT1 587 aaPredicted RBP21.56■■□□□ 1.04
ALMS1P1-202ENST00000450720 SLC4A9Q96Q91 983 aa21.56■■□□□ 1.04
ALMS1P1-202ENST00000450720 NUP188Q5SRE5 1749 aa21.56■■□□□ 1.04
ALMS1P1-202ENST00000450720 ITPK1Q13572 414 aa21.55■■□□□ 1.04
ALMS1P1-202ENST00000450720 FMNL2Q96PY5 1086 aa21.55■■□□□ 1.04
ALMS1P1-202ENST00000450720 KCPQ6ZWJ8 1503 aa21.55■■□□□ 1.04
ALMS1P1-202ENST00000450720 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
ALMS1P1-202ENST00000450720 STK32BQ9NY57 414 aa21.54■■□□□ 1.04
ALMS1P1-202ENST00000450720 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
ALMS1P1-202ENST00000450720 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
ALMS1P1-202ENST00000450720 NGEFQ8N5V2 710 aa21.52■■□□□ 1.04
ALMS1P1-202ENST00000450720 CFAP44Q96MT7 982 aa21.52■■□□□ 1.04
ALMS1P1-202ENST00000450720 ZNF827Q17R98 1081 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 DNAJC10Q8IXB1 793 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 HEG1Q9ULI3 1381 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 C5P01031 1676 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 CHL1O00533 1208 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 HMGB2P26583 209 aaKnown RBP21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 GNAI1P63096 354 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 R3HDM1Q15032 1099 aaKnown RBP21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 AK7Q96M32 723 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 IFT57Q9NWB7 429 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
ALMS1P1-202ENST00000450720 UBR2Q8IWV8 1755 aa21.5■■□□□ 1.03
ALMS1P1-202ENST00000450720 PSDA5PKW4 1024 aaPredicted RBP21.5■■□□□ 1.03
ALMS1P1-202ENST00000450720 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
ALMS1P1-202ENST00000450720 TFCP2L1Q9NZI6 479 aa21.5■■□□□ 1.03
ALMS1P1-202ENST00000450720 EIF4A1P60842 406 aaKnown RBP21.49■■□□□ 1.03
ALMS1P1-202ENST00000450720 SLC15A2Q16348 729 aa21.49■■□□□ 1.03
ALMS1P1-202ENST00000450720 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
ALMS1P1-202ENST00000450720 KDM3BQ7LBC6 1761 aa21.48■■□□□ 1.03
ALMS1P1-202ENST00000450720 PRAMEF22A3QJZ6 481 aa21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 WDR63Q8IWG1 891 aa21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 AKT1S1Q96B36 256 aa21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 GNPATO15228 680 aa21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 STARD3NLO95772 234 aa21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 ZNF853P0CG23 659 aa21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 CRKLP46109 303 aaKnown RBP21.47■■□□□ 1.03
ALMS1P1-202ENST00000450720 C4BP0C0L5 1744 aa21.46■■□□□ 1.03
ALMS1P1-202ENST00000450720 TJP1Q07157 1748 aa21.46■■□□□ 1.03
ALMS1P1-202ENST00000450720 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
ALMS1P1-202ENST00000450720 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
ALMS1P1-202ENST00000450720 ZNF831Q5JPB2 1677 aa21.46■■□□□ 1.03
ALMS1P1-202ENST00000450720 TAF1LQ8IZX4 1826 aa21.45■■□□□ 1.03
ALMS1P1-202ENST00000450720 PHF14O94880 888 aa21.45■■□□□ 1.02
ALMS1P1-202ENST00000450720 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
ALMS1P1-202ENST00000450720 IL16Q14005 1332 aa21.45■■□□□ 1.02
ALMS1P1-202ENST00000450720 GIGYF1O75420 1035 aaPredicted RBP21.44■■□□□ 1.02
ALMS1P1-202ENST00000450720 KRT24Q2M2I5 525 aa21.44■■□□□ 1.02
ALMS1P1-202ENST00000450720 CCDC87Q9NVE4 849 aa21.44■■□□□ 1.02
ALMS1P1-202ENST00000450720 USP16Q9Y5T5 823 aa21.44■■□□□ 1.02
ALMS1P1-202ENST00000450720 CNTNAP4Q9C0A0 1308 aa21.43■■□□□ 1.02
ALMS1P1-202ENST00000450720 MSH5O43196 834 aa21.43■■□□□ 1.02
ALMS1P1-202ENST00000450720 SMIM5Q71RC9 77 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms