RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
PROM1-201ENST00000447510 CAMTA1Q9Y6Y1 1673 aa7.49□□□□□ -1.21
PROM1-201ENST00000447510 RNMTO43148 476 aaKnown RBP7.49□□□□□ -1.21
PROM1-201ENST00000447510 PRIM1P49642 420 aaKnown RBP7.49□□□□□ -1.21
PROM1-201ENST00000447510 WDR63Q8IWG1 891 aa7.49□□□□□ -1.21
PROM1-201ENST00000447510 STK31Q9BXU1 1019 aa7.49□□□□□ -1.21
PROM1-201ENST00000447510 CHMP4AQ9BY43 222 aa7.49□□□□□ -1.21
PROM1-201ENST00000447510 HTATSF1O43719 755 aaKnown RBP7.48□□□□□ -1.21
PROM1-201ENST00000447510 PLIN1O60240 522 aa7.48□□□□□ -1.21
PROM1-201ENST00000447510 NFAT5O94916 1531 aa7.48□□□□□ -1.21
PROM1-201ENST00000447510 SLC39A6Q13433 755 aa7.48□□□□□ -1.21
PROM1-201ENST00000447510 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
PROM1-201ENST00000447510 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.48□□□□□ -1.21
PROM1-201ENST00000447510 PLEKHF1Q96S99 279 aa7.48□□□□□ -1.21
PROM1-201ENST00000447510 NRKQ7Z2Y5 1582 aa7.48□□□□□ -1.21
PROM1-201ENST00000447510 TRPM3Q9HCF6 1732 aaPredicted RBP7.48□□□□□ -1.21
PROM1-201ENST00000447510 CYP27B1O15528 508 aa7.47□□□□□ -1.21
PROM1-201ENST00000447510 SPRYD3Q8NCJ5 442 aa7.47□□□□□ -1.21
PROM1-201ENST00000447510 FAM196AQ6ZSG2 479 aa7.47□□□□□ -1.21
PROM1-201ENST00000447510 EXOSC9Q06265 439 aaKnown RBP7.47□□□□□ -1.21
PROM1-201ENST00000447510 ALS2Q96Q42 1657 aa7.47□□□□□ -1.21
PROM1-201ENST00000447510 IL17REQ8NFR9 667 aa7.46□□□□□ -1.21
PROM1-201ENST00000447510 IFT57Q9NWB7 429 aa7.46□□□□□ -1.21
PROM1-201ENST00000447510 POTEAQ6S8J7 498 aa7.46□□□□□ -1.22
PROM1-201ENST00000447510 SMC4Q9NTJ3 1288 aa7.46□□□□□ -1.22
PROM1-201ENST00000447510 LRP6O75581 1613 aa7.46□□□□□ -1.22
PROM1-201ENST00000447510 TRIM37O94972 964 aa7.46□□□□□ -1.22
PROM1-201ENST00000447510 CFAP44Q96MT7 982 aa7.46□□□□□ -1.22
PROM1-201ENST00000447510 BCL2L13Q9BXK5 485 aa7.46□□□□□ -1.22
PROM1-201ENST00000447510 RRP9O43818 475 aaKnown RBP7.45□□□□□ -1.22
PROM1-201ENST00000447510 RBM10P98175 930 aaKnown RBP7.45□□□□□ -1.22
PROM1-201ENST00000447510 SMARCC1Q92922 1105 aaPredicted RBP7.45□□□□□ -1.22
PROM1-201ENST00000447510 SLC52A2Q9HAB3 445 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 TRIM35Q9UPQ4 493 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 KDRP35968 1356 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 ANKRD26Q9UPS8 1709 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 ERVV-2B6SEH9 535 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 NPHP1O15259 732 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 TWISTNBQ3B726 338 aaPredicted RBP7.45□□□□□ -1.22
PROM1-201ENST00000447510 MARCH10Q8NA82 808 aaPredicted RBP7.45□□□□□ -1.22
PROM1-201ENST00000447510 FMNL2Q96PY5 1086 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 APBA3O96018 575 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 CCDC27Q2M243 656 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 L1TD1Q5T7N2 865 aaKnown RBP7.45□□□□□ -1.22
PROM1-201ENST00000447510 HDGFL1Q5TGJ6 251 aa7.45□□□□□ -1.22
PROM1-201ENST00000447510 MBIPQ9NS73 344 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 RCAN3Q9UKA8 241 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 COL14A1Q05707 1796 aaKnown RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 SLIT2O94813 1529 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 RRP1P56182 461 aaKnown RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 FTSJ3Q8IY81 847 aaKnown RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 MEGF6O75095 1541 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 BCL9LQ86UU0 1499 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 STARD3NLO95772 234 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 SLFN5Q08AF3 891 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 DUSP27Q5VZP5 1158 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 LTN1O94822 1766 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 PHRF1Q9P1Y6 1649 aaKnown RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 COL3A1P02461 1466 aaPredicted RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 ATP6V1AP38606 617 aa7.44□□□□□ -1.22
PROM1-201ENST00000447510 AIMP1Q12904 312 aaKnown RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 TRIM44Q96DX7 344 aaPredicted RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 BCL11BQ9C0K0 894 aaPredicted RBP7.44□□□□□ -1.22
PROM1-201ENST00000447510 OVOS2A0A0G2JMS6 1433 aa7.43□□□□□ -1.22
PROM1-201ENST00000447510 ZNF790Q6PG37 636 aa7.43□□□□□ -1.22
PROM1-201ENST00000447510 KCNQ2O43526 872 aa7.43□□□□□ -1.22
PROM1-201ENST00000447510 MYL6BP14649 208 aa7.43□□□□□ -1.22
PROM1-201ENST00000447510 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
PROM1-201ENST00000447510 IL16Q14005 1332 aa7.43□□□□□ -1.22
PROM1-201ENST00000447510 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
PROM1-201ENST00000447510 SNRPA1P09661 255 aaKnown RBP7.42□□□□□ -1.22
PROM1-201ENST00000447510 BAG6P46379 1132 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 PIGBQ92521 554 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 ASAP1Q9ULH1 1129 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 GOLGA6L3A6NEY3 463 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 MS4A1P11836 297 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 SLC4A10Q6U841 1118 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 CCNL1Q9UK58 526 aaPredicted RBP7.42□□□□□ -1.22
PROM1-201ENST00000447510 PEAK1Q9H792 1746 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 SHPRHQ149N8 1683 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 KCNQ3O43525 872 aa7.42□□□□□ -1.22
PROM1-201ENST00000447510 TEX13AQ9BXU3 409 aaPredicted RBP7.42□□□□□ -1.22
PROM1-201ENST00000447510 HMGB2P26583 209 aaKnown RBP7.41□□□□□ -1.22
PROM1-201ENST00000447510 FKBP5Q13451 457 aaPredicted RBP7.41□□□□□ -1.22
PROM1-201ENST00000447510 KRT24Q2M2I5 525 aa7.41□□□□□ -1.22
PROM1-201ENST00000447510 CHL1O00533 1208 aa7.41□□□□□ -1.22
PROM1-201ENST00000447510 SLC4A2P04920 1241 aa7.41□□□□□ -1.22
PROM1-201ENST00000447510 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
PROM1-201ENST00000447510 ZNF496Q96IT1 587 aaPredicted RBP7.41□□□□□ -1.22
PROM1-201ENST00000447510 AK7Q96M32 723 aa7.41□□□□□ -1.22
PROM1-201ENST00000447510 PANK2Q9BZ23 570 aa7.41□□□□□ -1.22
PROM1-201ENST00000447510 CRBNQ96SW2 442 aa7.41□□□□□ -1.22
PROM1-201ENST00000447510 SPINK5Q9NQ38 1064 aaPredicted RBP7.41□□□□□ -1.22
PROM1-201ENST00000447510 DDX58O95786 925 aaKnown RBP7.4□□□□□ -1.22
PROM1-201ENST00000447510 C8orf58Q8NAV2 365 aa7.4□□□□□ -1.22
PROM1-201ENST00000447510 ATRNO75882 1429 aa7.4□□□□□ -1.22
PROM1-201ENST00000447510 RIC3Q7Z5B4 369 aa7.4□□□□□ -1.22
PROM1-201ENST00000447510 BABAM1Q9NWV8 329 aa7.4□□□□□ -1.22
PROM1-201ENST00000447510 KCNQ4P56696 695 aa7.4□□□□□ -1.23
PROM1-201ENST00000447510 NCBP3Q53F19 620 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms