RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 EXOC5O00471 708 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
PTCH2-203ENST00000447098 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
PTCH2-203ENST00000447098 PI4KAP2A4QPH2 592 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
PTCH2-203ENST00000447098 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 PI4KAP1Q8N8J0 262 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 SNX21Q969T3 373 aa13.66□□□□□ -0.22
PTCH2-203ENST00000447098 ZNF335Q9H4Z2 1342 aaPredicted RBP13.65□□□□□ -0.22
PTCH2-203ENST00000447098 TOM1O60784 492 aa13.65□□□□□ -0.22
PTCH2-203ENST00000447098 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
PTCH2-203ENST00000447098 KDM5AP29375 1690 aaKnown RBP13.65□□□□□ -0.22
PTCH2-203ENST00000447098 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 MYD88Q99836 296 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
PTCH2-203ENST00000447098 CHPF2Q9P2E5 772 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 UQCRHP07919 91 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 ST18O60284 1047 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 MAP3K4Q9Y6R4 1608 aa13.64□□□□□ -0.23
PTCH2-203ENST00000447098 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
PTCH2-203ENST00000447098 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
PTCH2-203ENST00000447098 NPHP4O75161 1426 aaPredicted RBP13.63□□□□□ -0.23
PTCH2-203ENST00000447098 VAMP4O75379 141 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 CDC45O75419 566 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 ZCRB1Q8TBF4 217 aaKnown RBP13.63□□□□□ -0.23
PTCH2-203ENST00000447098 G3V3G9 751 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 GPTP24298 496 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 MEIS3Q99687 375 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
PTCH2-203ENST00000447098 RNF214Q8ND24 703 aa13.63□□□□□ -0.23
PTCH2-203ENST00000447098 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
PTCH2-203ENST00000447098 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 KLHL40Q2TBA0 621 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 HSP90B1P14625 803 aaKnown RBP13.62□□□□□ -0.23
PTCH2-203ENST00000447098 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 OFD1O75665 1012 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
PTCH2-203ENST00000447098 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
PTCH2-203ENST00000447098 DBF4Q9UBU7 674 aaPredicted RBP13.62□□□□□ -0.23
PTCH2-203ENST00000447098 KIAA2012Q0VF49 1180 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 IL16Q14005 1332 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 TSHZ3Q63HK5 1081 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
PTCH2-203ENST00000447098 SBNO1A3KN83 1393 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 NUCB1Q02818 461 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 MAP3K2Q9Y2U5 619 aa13.61□□□□□ -0.23
PTCH2-203ENST00000447098 APPP05067 770 aa13.6□□□□□ -0.23
PTCH2-203ENST00000447098 G2E3Q7L622 706 aa13.6□□□□□ -0.23
PTCH2-203ENST00000447098 VPS37DQ86XT2 251 aa13.6□□□□□ -0.23
PTCH2-203ENST00000447098 RABEP1Q15276 862 aa13.6□□□□□ -0.23
PTCH2-203ENST00000447098 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
PTCH2-203ENST00000447098 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
PTCH2-203ENST00000447098 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
PTCH2-203ENST00000447098 CLTCQ00610 1675 aaKnown RBP13.6□□□□□ -0.23
PTCH2-203ENST00000447098 REC8O95072 547 aa13.59□□□□□ -0.23
PTCH2-203ENST00000447098 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
PTCH2-203ENST00000447098 STARD3NLO95772 234 aa13.59□□□□□ -0.23
PTCH2-203ENST00000447098 FSD1Q9BTV5 496 aa13.59□□□□□ -0.23
PTCH2-203ENST00000447098 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
PTCH2-203ENST00000447098 MTERF4Q7Z6M4 381 aaKnown RBP13.59□□□□□ -0.23
PTCH2-203ENST00000447098 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
PTCH2-203ENST00000447098 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
PTCH2-203ENST00000447098 SYAP1Q96A49 352 aaPredicted RBP13.59□□□□□ -0.23
PTCH2-203ENST00000447098 CNNM1Q9NRU3 951 aa13.58□□□□□ -0.24
PTCH2-203ENST00000447098 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
PTCH2-203ENST00000447098 AACSQ86V21 672 aa13.58□□□□□ -0.24
PTCH2-203ENST00000447098 FBXW7Q969H0 707 aa13.58□□□□□ -0.24
PTCH2-203ENST00000447098 ADGRB3O60242 1522 aa13.58□□□□□ -0.24
PTCH2-203ENST00000447098 IL2RBP14784 551 aa13.58□□□□□ -0.24
PTCH2-203ENST00000447098 WASHC4Q2M389 1173 aa13.58□□□□□ -0.24
PTCH2-203ENST00000447098 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.24
PTCH2-203ENST00000447098 MADDQ8WXG6 1647 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 SYNMO15061 1565 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 A0A087WZG4 1122 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 ERC2O15083 957 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 ZSCAN23Q3MJ62 389 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 ALKQ9UM73 1620 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
PTCH2-203ENST00000447098 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
PTCH2-203ENST00000447098 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms