RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TRAK2O60296 914 aa12.81□□□□□ -0.36
TOP3B-210ENST00000444502 NEK4P51957 841 aa12.81□□□□□ -0.36
TOP3B-210ENST00000444502 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
TOP3B-210ENST00000444502 DNAJC2Q99543 621 aaKnown RBP12.81□□□□□ -0.36
TOP3B-210ENST00000444502 ZBTB3Q9H5J0 574 aa12.81□□□□□ -0.36
TOP3B-210ENST00000444502 RAD21O60216 631 aa12.81□□□□□ -0.36
TOP3B-210ENST00000444502 WASHC4Q2M389 1173 aa12.8□□□□□ -0.36
TOP3B-210ENST00000444502 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
TOP3B-210ENST00000444502 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
TOP3B-210ENST00000444502 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
TOP3B-210ENST00000444502 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
TOP3B-210ENST00000444502 LRRCC1Q9C099 1032 aa12.8□□□□□ -0.36
TOP3B-210ENST00000444502 SF3B2Q13435 895 aaKnown RBP12.8□□□□□ -0.36
TOP3B-210ENST00000444502 ABCA9Q8IUA7 1624 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 FLIIQ13045 1269 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-210ENST00000444502 GPTP24298 496 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 ABCA6Q8N139 1617 aa12.79□□□□□ -0.36
TOP3B-210ENST00000444502 STARD3NLO95772 234 aa12.78□□□□□ -0.36
TOP3B-210ENST00000444502 MCM4P33991 863 aa12.78□□□□□ -0.36
TOP3B-210ENST00000444502 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
TOP3B-210ENST00000444502 VGLL3A8MV65 326 aa12.78□□□□□ -0.36
TOP3B-210ENST00000444502 ATP5J2-PTCD1G3V325 749 aa12.78□□□□□ -0.36
TOP3B-210ENST00000444502 MYD88Q99836 296 aa12.78□□□□□ -0.36
TOP3B-210ENST00000444502 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
TOP3B-210ENST00000444502 LRRFIP2Q9Y608 721 aaKnown RBP12.78□□□□□ -0.36
TOP3B-210ENST00000444502 MRE11P49959 708 aa12.77□□□□□ -0.36
TOP3B-210ENST00000444502 BMP2KLQ5H9B9 411 aa12.77□□□□□ -0.36
TOP3B-210ENST00000444502 G2E3Q7L622 706 aa12.77□□□□□ -0.36
TOP3B-210ENST00000444502 FSD1Q9BTV5 496 aa12.77□□□□□ -0.36
TOP3B-210ENST00000444502 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.36
TOP3B-210ENST00000444502 CEP152O94986 1710 aa12.77□□□□□ -0.36
TOP3B-210ENST00000444502 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
TOP3B-210ENST00000444502 K7ELQ4 463 aaPredicted RBP12.77□□□□□ -0.36
TOP3B-210ENST00000444502 BTG4Q9NY30 223 aa12.77□□□□□ -0.36
TOP3B-210ENST00000444502 ERC2O15083 957 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 HOXC9P31274 260 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 RABEP1Q15276 862 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 RUFY2Q8WXA3 655 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
TOP3B-210ENST00000444502 FLT4P35916 1363 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
TOP3B-210ENST00000444502 PRR36Q9H6K5 1346 aa12.75□□□□□ -0.37
TOP3B-210ENST00000444502 PPRC1Q5VV67 1664 aaKnown RBP12.75□□□□□ -0.37
TOP3B-210ENST00000444502 ZKSCAN1P17029 563 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-210ENST00000444502 PTMSP20962 102 aa12.75□□□□□ -0.37
TOP3B-210ENST00000444502 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
TOP3B-210ENST00000444502 MPHOSPH8Q99549 860 aa12.75□□□□□ -0.37
TOP3B-210ENST00000444502 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
TOP3B-210ENST00000444502 OTUD7AQ8TE49 926 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-210ENST00000444502 GRPEL1Q9HAV7 217 aa12.74□□□□□ -0.37
TOP3B-210ENST00000444502 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-210ENST00000444502 INO80Q9ULG1 1556 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-210ENST00000444502 PTPRCP08575 1304 aa12.74□□□□□ -0.37
TOP3B-210ENST00000444502 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-210ENST00000444502 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
TOP3B-210ENST00000444502 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
TOP3B-210ENST00000444502 STK11IPQ8N1F8 1099 aa12.73□□□□□ -0.37
TOP3B-210ENST00000444502 NUCB2P80303 420 aa12.73□□□□□ -0.37
TOP3B-210ENST00000444502 ADGRB3O60242 1522 aa12.73□□□□□ -0.37
TOP3B-210ENST00000444502 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.73□□□□□ -0.37
TOP3B-210ENST00000444502 UPF3BQ9BZI7 483 aaKnown RBP12.73□□□□□ -0.37
TOP3B-210ENST00000444502 PHF14O94880 888 aa12.73□□□□□ -0.37
TOP3B-210ENST00000444502 SKOR2Q2VWA4 1001 aaPredicted RBP12.73□□□□□ -0.37
TOP3B-210ENST00000444502 AACSQ86V21 672 aa12.73□□□□□ -0.37
TOP3B-210ENST00000444502 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
TOP3B-210ENST00000444502 KIDINS220Q9ULH0 1771 aa12.73□□□□□ -0.37
TOP3B-210ENST00000444502 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 MX1P20591 662 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 FOSBP53539 338 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 FKBP4Q02790 459 aaKnown RBP eCLIP12.72□□□□□ -0.37
TOP3B-210ENST00000444502 DDB1Q16531 1140 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
TOP3B-210ENST00000444502 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 A0A087WZG4 1122 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 CHL1O00533 1208 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 SDSP20132 328 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 ARHGAP31Q2M1Z3 1444 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 IP6K1Q92551 441 aa12.72□□□□□ -0.37
TOP3B-210ENST00000444502 ROBO2Q9HCK4 1378 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 KDM4AO75164 1064 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 UQCRHP07919 91 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
TOP3B-210ENST00000444502 CEP85Q6P2H3 762 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 MAP7D2Q96T17 732 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 MAP3K2Q9Y2U5 619 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 LARP1Q6PKG0 1096 aaKnown RBP12.71□□□□□ -0.37
TOP3B-210ENST00000444502 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
TOP3B-210ENST00000444502 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms