RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PRIM1P49642 420 aaKnown RBP14.6□□□□□ -0.07
LTBR-203ENST00000441074 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
LTBR-203ENST00000441074 EIF4A2Q14240 407 aaKnown RBP14.6□□□□□ -0.07
LTBR-203ENST00000441074 CCDC39Q9UFE4 941 aa14.6□□□□□ -0.07
LTBR-203ENST00000441074 DCCP43146 1447 aa14.6□□□□□ -0.07
LTBR-203ENST00000441074 LMOD2Q6P5Q4 547 aa14.59□□□□□ -0.07
LTBR-203ENST00000441074 MAP3K19Q56UN5 1328 aa14.59□□□□□ -0.07
LTBR-203ENST00000441074 CDC45O75419 566 aa14.59□□□□□ -0.07
LTBR-203ENST00000441074 PSME1Q06323 249 aa14.59□□□□□ -0.07
LTBR-203ENST00000441074 CWC22Q9HCG8 908 aaKnown RBP14.59□□□□□ -0.07
LTBR-203ENST00000441074 ZBTB7CA1YPR0 619 aa14.58□□□□□ -0.08
LTBR-203ENST00000441074 OVOS2A0A0J9YW53 1432 aa14.58□□□□□ -0.08
LTBR-203ENST00000441074 MST1RQ04912 1400 aa14.58□□□□□ -0.08
LTBR-203ENST00000441074 OVOS2Q6IE36 1432 aa14.58□□□□□ -0.08
LTBR-203ENST00000441074 SULT6B1Q6IMI4 303 aa14.58□□□□□ -0.08
LTBR-203ENST00000441074 CFAP44Q96MT7 982 aa14.58□□□□□ -0.08
LTBR-203ENST00000441074 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
LTBR-203ENST00000441074 FAM83GA6ND36 823 aa14.57□□□□□ -0.08
LTBR-203ENST00000441074 ARHGAP45Q92619 1136 aa14.57□□□□□ -0.08
LTBR-203ENST00000441074 MON2Q7Z3U7 1717 aa14.57□□□□□ -0.08
LTBR-203ENST00000441074 C1orf167Q5SNV9 1468 aa14.57□□□□□ -0.08
LTBR-203ENST00000441074 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
LTBR-203ENST00000441074 LRSAM1Q6UWE0 723 aa14.57□□□□□ -0.08
LTBR-203ENST00000441074 LTV1Q96GA3 475 aaPredicted RBP14.57□□□□□ -0.08
LTBR-203ENST00000441074 TOPAZ1Q8N9V7 1692 aa14.56□□□□□ -0.08
LTBR-203ENST00000441074 FMN2Q9NZ56 1722 aa14.56□□□□□ -0.08
LTBR-203ENST00000441074 ZBTB7BO15156 539 aaPredicted RBP14.55□□□□□ -0.08
LTBR-203ENST00000441074 GPT2Q8TD30 523 aa14.55□□□□□ -0.08
LTBR-203ENST00000441074 MAP2P11137 1827 aaKnown RBP14.55□□□□□ -0.08
LTBR-203ENST00000441074 AMPHP49418 695 aa14.55□□□□□ -0.08
LTBR-203ENST00000441074 UTP14CQ5TAP6 766 aaKnown RBP14.55□□□□□ -0.08
LTBR-203ENST00000441074 CCDC94Q9BW85 323 aaPredicted RBP14.55□□□□□ -0.08
LTBR-203ENST00000441074 ITSN1Q15811 1721 aa14.55□□□□□ -0.08
LTBR-203ENST00000441074 AKAP12Q02952 1782 aa14.55□□□□□ -0.08
LTBR-203ENST00000441074 PRPF40AO75400 957 aaKnown RBP14.54□□□□□ -0.08
LTBR-203ENST00000441074 BRINP3Q76B58 766 aa14.54□□□□□ -0.08
LTBR-203ENST00000441074 TTC21AQ8NDW8 1320 aa14.54□□□□□ -0.08
LTBR-203ENST00000441074 ANKARQ7Z5J8 1434 aa14.53□□□□□ -0.08
LTBR-203ENST00000441074 AK9Q5TCS8 1911 aa14.53□□□□□ -0.08
LTBR-203ENST00000441074 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
LTBR-203ENST00000441074 NRKQ7Z2Y5 1582 aa14.53□□□□□ -0.08
LTBR-203ENST00000441074 NFE2L2Q16236 605 aa14.53□□□□□ -0.08
LTBR-203ENST00000441074 USP31Q70CQ4 1352 aa14.52□□□□□ -0.08
LTBR-203ENST00000441074 PKP1Q13835 747 aa14.52□□□□□ -0.08
LTBR-203ENST00000441074 USP26Q9BXU7 913 aa14.52□□□□□ -0.08
LTBR-203ENST00000441074 CDK12Q9NYV4 1490 aaPredicted RBP14.52□□□□□ -0.09
LTBR-203ENST00000441074 DMTNQ08495 405 aa14.52□□□□□ -0.09
LTBR-203ENST00000441074 IFT57Q9NWB7 429 aa14.52□□□□□ -0.09
LTBR-203ENST00000441074 TMEM63CQ9P1W3 806 aa14.52□□□□□ -0.09
LTBR-203ENST00000441074 KIF24Q5T7B8 1368 aa14.51□□□□□ -0.09
LTBR-203ENST00000441074 GNAI1P63096 354 aa14.51□□□□□ -0.09
LTBR-203ENST00000441074 USHBP1Q8N6Y0 703 aa14.51□□□□□ -0.09
LTBR-203ENST00000441074 MYRIPQ8NFW9 859 aa14.51□□□□□ -0.09
LTBR-203ENST00000441074 ABCC4O15439 1325 aa14.51□□□□□ -0.09
LTBR-203ENST00000441074 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
LTBR-203ENST00000441074 GSPT1P15170 499 aaKnown RBP14.5□□□□□ -0.09
LTBR-203ENST00000441074 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
LTBR-203ENST00000441074 MRPL50Q8N5N7 158 aaKnown RBP14.5□□□□□ -0.09
LTBR-203ENST00000441074 ZDHHC9Q9Y397 364 aa14.5□□□□□ -0.09
LTBR-203ENST00000441074 SYCE3A1L190 88 aa14.5□□□□□ -0.09
LTBR-203ENST00000441074 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
LTBR-203ENST00000441074 KIAA2012Q0VF49 1180 aa14.5□□□□□ -0.09
LTBR-203ENST00000441074 VAMP4O75379 141 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 MBD3O95983 291 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 EYA1Q99502 592 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 ST18O60284 1047 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 MCM10Q7L590 875 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 C1orf115Q9H7X2 142 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 PEAK1Q9H792 1746 aa14.49□□□□□ -0.09
LTBR-203ENST00000441074 PIK3C2AO00443 1686 aa14.48□□□□□ -0.09
LTBR-203ENST00000441074 ROBO1Q9Y6N7 1651 aa14.48□□□□□ -0.09
LTBR-203ENST00000441074 HOXC9P31274 260 aa14.48□□□□□ -0.09
LTBR-203ENST00000441074 PRIMPOLQ96LW4 560 aa14.48□□□□□ -0.09
LTBR-203ENST00000441074 ZGPATQ8N5A5 531 aaKnown RBP14.48□□□□□ -0.09
LTBR-203ENST00000441074 ARID3AQ99856 593 aa14.48□□□□□ -0.09
LTBR-203ENST00000441074 API5Q9BZZ5 524 aaKnown RBP14.48□□□□□ -0.09
LTBR-203ENST00000441074 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
LTBR-203ENST00000441074 ZNF853P0CG23 659 aa14.47□□□□□ -0.09
LTBR-203ENST00000441074 ZSCAN20P17040 1043 aaPredicted RBP14.47□□□□□ -0.09
LTBR-203ENST00000441074 TTC22Q5TAA0 569 aa14.47□□□□□ -0.09
LTBR-203ENST00000441074 INTS3Q68E01 1043 aaKnown RBP14.47□□□□□ -0.09
LTBR-203ENST00000441074 KRT28Q7Z3Y7 464 aa14.47□□□□□ -0.09
LTBR-203ENST00000441074 PTMAP06454 111 aaKnown RBP14.47□□□□□ -0.09
LTBR-203ENST00000441074 HMGN5P82970 282 aaKnown RBP14.47□□□□□ -0.09
LTBR-203ENST00000441074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.47□□□□□ -0.09
LTBR-203ENST00000441074 FLT4P35916 1363 aa14.46□□□□□ -0.09
LTBR-203ENST00000441074 GTF2F1P35269 517 aaKnown RBP eCLIP14.46□□□□□ -0.09
LTBR-203ENST00000441074 TSPYL6Q8N831 410 aa14.46□□□□□ -0.09
LTBR-203ENST00000441074 CABLES1Q8TDN4 633 aa14.46□□□□□ -0.09
LTBR-203ENST00000441074 MIS18AQ9NYP9 233 aa14.46□□□□□ -0.09
LTBR-203ENST00000441074 NSFL1CQ9UNZ2 370 aaKnown RBP14.46□□□□□ -0.09
LTBR-203ENST00000441074 SBNO1A3KN83 1393 aa14.46□□□□□ -0.1
LTBR-203ENST00000441074 TSPY26PQ9H489 355 aa14.46□□□□□ -0.1
LTBR-203ENST00000441074 ZHX1Q9UKY1 873 aaPredicted RBP14.46□□□□□ -0.1
LTBR-203ENST00000441074 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
LTBR-203ENST00000441074 FBXO41Q8TF61 875 aa14.45□□□□□ -0.1
LTBR-203ENST00000441074 GCP02774 474 aa14.44□□□□□ -0.1
LTBR-203ENST00000441074 ZC3H6P61129 1189 aaKnown RBP14.44□□□□□ -0.1
LTBR-203ENST00000441074 MTHFSDQ2M296 383 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms