RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.91■□□□□ 0.14
CSTF3-203ENST00000438862 HTRA3P83110 453 aa15.91■□□□□ 0.14
CSTF3-203ENST00000438862 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
CSTF3-203ENST00000438862 MS4A3Q96HJ5 214 aa15.91■□□□□ 0.14
CSTF3-203ENST00000438862 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
CSTF3-203ENST00000438862 SSFA2P28290 1259 aa15.9■□□□□ 0.14
CSTF3-203ENST00000438862 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
CSTF3-203ENST00000438862 UBR3Q6ZT12 1888 aa15.89■□□□□ 0.13
CSTF3-203ENST00000438862 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
CSTF3-203ENST00000438862 PHF14O94880 888 aa15.89■□□□□ 0.13
CSTF3-203ENST00000438862 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
CSTF3-203ENST00000438862 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
CSTF3-203ENST00000438862 MEGF6O75095 1541 aa15.89■□□□□ 0.13
CSTF3-203ENST00000438862 HOXC9P31274 260 aa15.88■□□□□ 0.13
CSTF3-203ENST00000438862 AMPHP49418 695 aa15.88■□□□□ 0.13
CSTF3-203ENST00000438862 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
CSTF3-203ENST00000438862 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
CSTF3-203ENST00000438862 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
CSTF3-203ENST00000438862 CD163L1Q9NR16 1453 aa15.88■□□□□ 0.13
CSTF3-203ENST00000438862 AMIGO3Q86WK7 504 aa15.87■□□□□ 0.13
CSTF3-203ENST00000438862 RAPGEF4Q8WZA2 1011 aa15.87■□□□□ 0.13
CSTF3-203ENST00000438862 KDM2BQ8NHM5 1336 aa15.87■□□□□ 0.13
CSTF3-203ENST00000438862 PCNTO95613 3336 aa15.87■□□□□ 0.13
CSTF3-203ENST00000438862 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
CSTF3-203ENST00000438862 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
CSTF3-203ENST00000438862 TOGARAM1Q9Y4F4 1720 aa15.86■□□□□ 0.13
CSTF3-203ENST00000438862 RGPD2P0DJD1 1756 aa15.86■□□□□ 0.13
CSTF3-203ENST00000438862 KIF13BQ9NQT8 1826 aa15.86■□□□□ 0.13
CSTF3-203ENST00000438862 TATP17735 454 aaPredicted RBP15.85■□□□□ 0.13
CSTF3-203ENST00000438862 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
CSTF3-203ENST00000438862 MAP3K19Q56UN5 1328 aa15.85■□□□□ 0.13
CSTF3-203ENST00000438862 PCDH11XQ9BZA7 1347 aa15.85■□□□□ 0.13
CSTF3-203ENST00000438862 PCDH11YQ9BZA8 1340 aa15.85■□□□□ 0.13
CSTF3-203ENST00000438862 A0A0G2JLW4 131 aa15.84■□□□□ 0.13
CSTF3-203ENST00000438862 SLC34A2O95436 690 aa15.84■□□□□ 0.13
CSTF3-203ENST00000438862 MMP10P09238 476 aa15.84■□□□□ 0.13
CSTF3-203ENST00000438862 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
CSTF3-203ENST00000438862 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
CSTF3-203ENST00000438862 ASTLQ6HA08 431 aaPredicted RBP15.84■□□□□ 0.13
CSTF3-203ENST00000438862 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
CSTF3-203ENST00000438862 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
CSTF3-203ENST00000438862 N4BP2Q86UW6 1770 aaPredicted RBP15.84■□□□□ 0.13
CSTF3-203ENST00000438862 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
CSTF3-203ENST00000438862 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
CSTF3-203ENST00000438862 FCHSD2O94868 740 aa15.83■□□□□ 0.12
CSTF3-203ENST00000438862 HSPA1AP0DMV8 641 aaKnown RBP15.83■□□□□ 0.12
CSTF3-203ENST00000438862 HSPA1BP0DMV9 641 aaKnown RBP15.83■□□□□ 0.12
CSTF3-203ENST00000438862 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
CSTF3-203ENST00000438862 SMC1BQ8NDV3 1235 aa15.83■□□□□ 0.12
CSTF3-203ENST00000438862 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
CSTF3-203ENST00000438862 COG3Q96JB2 828 aa15.83■□□□□ 0.12
CSTF3-203ENST00000438862 KIAA1551Q9HCM1 1747 aa15.82■□□□□ 0.12
CSTF3-203ENST00000438862 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
CSTF3-203ENST00000438862 RRAGCQ9HB90 399 aa15.82■□□□□ 0.12
CSTF3-203ENST00000438862 ITGB4P16144 1822 aa15.81■□□□□ 0.12
CSTF3-203ENST00000438862 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 GNPATO15228 680 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 ATMINO43313 823 aaPredicted RBP15.8■□□□□ 0.12
CSTF3-203ENST00000438862 DPEP1P16444 411 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 SIK1P57059 783 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 PIGBQ92521 554 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
CSTF3-203ENST00000438862 CCDC87Q9NVE4 849 aa15.8■□□□□ 0.12
CSTF3-203ENST00000438862 KCPQ6ZWJ8 1503 aa15.79■□□□□ 0.12
CSTF3-203ENST00000438862 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
CSTF3-203ENST00000438862 TMF1P82094 1093 aa15.79■□□□□ 0.12
CSTF3-203ENST00000438862 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
CSTF3-203ENST00000438862 SMG6Q86US8 1419 aaKnown RBP15.78■□□□□ 0.12
CSTF3-203ENST00000438862 ARFGEF1Q9Y6D6 1849 aa15.78■□□□□ 0.12
CSTF3-203ENST00000438862 CYP27B1O15528 508 aa15.78■□□□□ 0.12
CSTF3-203ENST00000438862 TRAPPC3LQ5T215 181 aa15.78■□□□□ 0.12
CSTF3-203ENST00000438862 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
CSTF3-203ENST00000438862 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
CSTF3-203ENST00000438862 BRCA1P38398 1863 aaKnown RBP15.78■□□□□ 0.12
CSTF3-203ENST00000438862 MAP2P11137 1827 aaKnown RBP15.78■□□□□ 0.12
CSTF3-203ENST00000438862 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.12
CSTF3-203ENST00000438862 FBLN1P23142 703 aa15.77■□□□□ 0.12
CSTF3-203ENST00000438862 RNF181Q9P0P0 153 aa15.77■□□□□ 0.12
CSTF3-203ENST00000438862 KCNA3P22001 575 aa15.76■□□□□ 0.11
CSTF3-203ENST00000438862 ATP6V1AP38606 617 aa15.76■□□□□ 0.11
CSTF3-203ENST00000438862 NKX1-1Q15270 411 aaPredicted RBP15.76■□□□□ 0.11
CSTF3-203ENST00000438862 ITPK1Q13572 414 aa15.75■□□□□ 0.11
CSTF3-203ENST00000438862 DCAF5Q96JK2 942 aa15.75■□□□□ 0.11
CSTF3-203ENST00000438862 RTCBQ9Y3I0 505 aaKnown RBP15.75■□□□□ 0.11
CSTF3-203ENST00000438862 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
CSTF3-203ENST00000438862 DALRD3Q5D0E6 543 aaKnown RBP15.74■□□□□ 0.11
CSTF3-203ENST00000438862 ZC3H4Q9UPT8 1303 aaKnown RBP15.73■□□□□ 0.11
CSTF3-203ENST00000438862 VEGFAP15692 232 aaPredicted RBP15.73■□□□□ 0.11
CSTF3-203ENST00000438862 RRS1Q15050 365 aaKnown RBP15.73■□□□□ 0.11
CSTF3-203ENST00000438862 KIF12Q96FN5 646 aa15.73■□□□□ 0.11
CSTF3-203ENST00000438862 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
CSTF3-203ENST00000438862 PCDH10Q9P2E7 1040 aa15.73■□□□□ 0.11
CSTF3-203ENST00000438862 METRNQ9UJH8 293 aa15.73■□□□□ 0.11
CSTF3-203ENST00000438862 SBF1O95248 1867 aa15.72■□□□□ 0.11
CSTF3-203ENST00000438862 C4AP0C0L4 1744 aa15.72■□□□□ 0.11
CSTF3-203ENST00000438862 ASAP1Q9ULH1 1129 aa15.72■□□□□ 0.11
CSTF3-203ENST00000438862 INSRP06213 1382 aa15.72■□□□□ 0.11
CSTF3-203ENST00000438862 POTEJP0CG39 1038 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms