RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 ANXA1P04083 346 aa20.44■□□□□ 0.86
TTC3-209ENST00000438055 KCNA6P17658 529 aa20.44■□□□□ 0.86
TTC3-209ENST00000438055 NASPP49321 788 aaPredicted RBP20.44■□□□□ 0.86
TTC3-209ENST00000438055 CHAMP1Q96JM3 812 aa20.44■□□□□ 0.86
TTC3-209ENST00000438055 ADAMTS13Q76LX8 1427 aa20.43■□□□□ 0.86
TTC3-209ENST00000438055 NCOA3Q9Y6Q9 1424 aa20.43■□□□□ 0.86
TTC3-209ENST00000438055 HOXC9P31274 260 aa20.43■□□□□ 0.86
TTC3-209ENST00000438055 PHAXQ9H814 394 aaKnown RBP20.43■□□□□ 0.86
TTC3-209ENST00000438055 OVOS2A0A0J9YW53 1432 aa20.43■□□□□ 0.86
TTC3-209ENST00000438055 OVOS2Q6IE36 1432 aa20.43■□□□□ 0.86
TTC3-209ENST00000438055 ARHGEF10O15013 1369 aa20.43■□□□□ 0.86
TTC3-209ENST00000438055 TEFQ10587 303 aa20.42■□□□□ 0.86
TTC3-209ENST00000438055 TECPR2O15040 1411 aa20.42■□□□□ 0.86
TTC3-209ENST00000438055 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
TTC3-209ENST00000438055 CRB1P82279 1406 aa20.41■□□□□ 0.86
TTC3-209ENST00000438055 RIMBP3CA6NJZ7 1639 aa20.41■□□□□ 0.86
TTC3-209ENST00000438055 RIMBP3BA6NNM3 1639 aa20.41■□□□□ 0.86
TTC3-209ENST00000438055 RIMBP3Q9UFD9 1639 aa20.41■□□□□ 0.86
TTC3-209ENST00000438055 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
TTC3-209ENST00000438055 CWC22Q9HCG8 908 aaKnown RBP20.41■□□□□ 0.86
TTC3-209ENST00000438055 PLEKHG1Q9ULL1 1385 aa20.41■□□□□ 0.86
TTC3-209ENST00000438055 RGS12O14924 1447 aa20.41■□□□□ 0.86
TTC3-209ENST00000438055 PSME1Q06323 249 aa20.4■□□□□ 0.86
TTC3-209ENST00000438055 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
TTC3-209ENST00000438055 ATP8B2P98198 1209 aa20.4■□□□□ 0.86
TTC3-209ENST00000438055 SRCIN1Q9C0H9 1055 aa20.4■□□□□ 0.86
TTC3-209ENST00000438055 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
TTC3-209ENST00000438055 XPCQ01831 940 aaPredicted RBP20.4■□□□□ 0.86
TTC3-209ENST00000438055 KLHL40Q2TBA0 621 aa20.4■□□□□ 0.86
TTC3-209ENST00000438055 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
TTC3-209ENST00000438055 ESPNB1AK53 854 aa20.39■□□□□ 0.86
TTC3-209ENST00000438055 ESYT1Q9BSJ8 1104 aa20.39■□□□□ 0.85
TTC3-209ENST00000438055 ESCO1Q5FWF5 840 aa20.39■□□□□ 0.85
TTC3-209ENST00000438055 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
TTC3-209ENST00000438055 TMX3Q96JJ7 454 aa20.38■□□□□ 0.85
TTC3-209ENST00000438055 RBM27Q9P2N5 1060 aaKnown RBP20.38■□□□□ 0.85
TTC3-209ENST00000438055 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
TTC3-209ENST00000438055 KIAA1211Q6ZU35 1233 aa20.37■□□□□ 0.85
TTC3-209ENST00000438055 USP31Q70CQ4 1352 aa20.36■□□□□ 0.85
TTC3-209ENST00000438055 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
TTC3-209ENST00000438055 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
TTC3-209ENST00000438055 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
TTC3-209ENST00000438055 PALD1Q9ULE6 856 aa20.36■□□□□ 0.85
TTC3-209ENST00000438055 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
TTC3-209ENST00000438055 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
TTC3-209ENST00000438055 USP44Q9H0E7 712 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 PHF8Q9UPP1 1060 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 MAP3K5Q99683 1374 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 PI4KAP2A4QPH2 592 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 CHMLP26374 656 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 UNC5CLQ8IV45 518 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 PI4KAP1Q8N8J0 262 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 LARP6Q9BRS8 491 aaKnown RBP20.35■□□□□ 0.85
TTC3-209ENST00000438055 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
TTC3-209ENST00000438055 C9orf78Q9NZ63 289 aaPredicted RBP20.34■□□□□ 0.85
TTC3-209ENST00000438055 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
TTC3-209ENST00000438055 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
TTC3-209ENST00000438055 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
TTC3-209ENST00000438055 LRRC59Q96AG4 307 aaKnown RBP20.34■□□□□ 0.85
TTC3-209ENST00000438055 RNF214Q8ND24 703 aa20.33■□□□□ 0.85
TTC3-209ENST00000438055 ZSCAN23Q3MJ62 389 aa20.32■□□□□ 0.84
TTC3-209ENST00000438055 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
TTC3-209ENST00000438055 MSNP26038 577 aaKnown RBP20.32■□□□□ 0.84
TTC3-209ENST00000438055 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
TTC3-209ENST00000438055 OSBPL3Q9H4L5 887 aa20.32■□□□□ 0.84
TTC3-209ENST00000438055 AIMP1Q12904 312 aaKnown RBP20.32■□□□□ 0.84
TTC3-209ENST00000438055 LMBRD1Q9NUN5 540 aa20.32■□□□□ 0.84
TTC3-209ENST00000438055 KCNQ3O43525 872 aa20.31■□□□□ 0.84
TTC3-209ENST00000438055 NBPF7P0C2Y1 421 aaPredicted RBP20.31■□□□□ 0.84
TTC3-209ENST00000438055 KCNJ4P48050 445 aa20.31■□□□□ 0.84
TTC3-209ENST00000438055 CWC27Q6UX04 472 aaKnown RBP20.31■□□□□ 0.84
TTC3-209ENST00000438055 REREQ9P2R6 1566 aa20.31■□□□□ 0.84
TTC3-209ENST00000438055 GDPD2Q9HCC8 539 aa20.31■□□□□ 0.84
TTC3-209ENST00000438055 CLCN1P35523 988 aa20.31■□□□□ 0.84
TTC3-209ENST00000438055 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
TTC3-209ENST00000438055 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
TTC3-209ENST00000438055 SYCE3A1L190 88 aa20.3■□□□□ 0.84
TTC3-209ENST00000438055 MCM2P49736 904 aa20.3■□□□□ 0.84
TTC3-209ENST00000438055 NBPF6Q5VWK0 638 aa20.3■□□□□ 0.84
TTC3-209ENST00000438055 NBPF4Q96M43 638 aa20.3■□□□□ 0.84
TTC3-209ENST00000438055 SETD1AO15047 1707 aaKnown RBP20.3■□□□□ 0.84
TTC3-209ENST00000438055 CCDC173Q0VFZ6 552 aa20.29■□□□□ 0.84
TTC3-209ENST00000438055 C3P01024 1663 aa20.29■□□□□ 0.84
TTC3-209ENST00000438055 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
TTC3-209ENST00000438055 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
TTC3-209ENST00000438055 DIAPH3Q9NSV4 1193 aa20.29■□□□□ 0.84
TTC3-209ENST00000438055 MON2Q7Z3U7 1717 aa20.29■□□□□ 0.84
TTC3-209ENST00000438055 KNDC1Q76NI1 1749 aa20.29■□□□□ 0.84
TTC3-209ENST00000438055 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
TTC3-209ENST00000438055 AK9Q5TCS8 1911 aa20.28■□□□□ 0.84
TTC3-209ENST00000438055 KDRP35968 1356 aa20.28■□□□□ 0.84
TTC3-209ENST00000438055 IBTKQ9P2D0 1353 aaPredicted RBP20.28■□□□□ 0.84
TTC3-209ENST00000438055 CNTROBQ8N137 903 aa20.28■□□□□ 0.84
TTC3-209ENST00000438055 KIF1BPQ96EK5 621 aa20.28■□□□□ 0.84
TTC3-209ENST00000438055 DTNBO60941 627 aa20.27■□□□□ 0.84
TTC3-209ENST00000438055 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.84
TTC3-209ENST00000438055 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.27■□□□□ 0.84
TTC3-209ENST00000438055 PTMAP06454 111 aaKnown RBP20.27■□□□□ 0.83
TTC3-209ENST00000438055 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.83
TTC3-209ENST00000438055 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms