RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 GPTP24298 496 aa12.86□□□□□ -0.35
CCDC144CP-202ENST00000433419 MKNK2Q9HBH9 465 aa12.86□□□□□ -0.35
CCDC144CP-202ENST00000433419 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 WASF1Q92558 559 aa12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 ZMYM3Q14202 1370 aa12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 NBPF6Q5VWK0 638 aa12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 NBPF4Q96M43 638 aa12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 CWC25Q9NXE8 425 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-202ENST00000433419 ZNF76P36508 570 aa12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 TMEM57Q8N5G2 664 aa12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 EXOC6BQ9Y2D4 811 aa12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 NCKAP5LQ9HCH0 1330 aa12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 NAP1L1P55209 391 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 NAPBQ9H115 298 aa12.84□□□□□ -0.35
CCDC144CP-202ENST00000433419 MAP4K4O95819 1239 aaPredicted RBP12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 FLIIQ13045 1269 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 CWC27Q6UX04 472 aaKnown RBP12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 ZSCAN31Q96LW9 406 aaPredicted RBP12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 PTPRCP08575 1304 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 MBD3O95983 291 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 IL2RBP14784 551 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 HOMER1Q86YM7 354 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 MAGEC2Q9UBF1 373 aaPredicted RBP12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 RPRD2Q5VT52 1461 aaKnown RBP12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 FILIP1LQ4L180 1135 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 ZFYVE27Q5T4F4 411 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 POLD1P28340 1107 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 SSH1Q8WYL5 1049 aa12.83□□□□□ -0.36
CCDC144CP-202ENST00000433419 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 ABCC2Q92887 1545 aa12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 STIM1Q13586 685 aa12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 ZNF444Q8N0Y2 327 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 RDXP35241 583 aaKnown RBP12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 SPTY2D1Q68D10 685 aaPredicted RBP12.82□□□□□ -0.36
CCDC144CP-202ENST00000433419 TRAPPC8Q9Y2L5 1435 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 CCDC196A0A1B0GTZ2 297 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 TNIP1Q15025 636 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 SYCP1Q15431 976 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 MINDY4BA8MYZ0 360 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 MYO1BO43795 1136 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 MX1P20591 662 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 IQCA1Q86XH1 822 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 PAF1Q8N7H5 531 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 CDCA7Q9BWT1 371 aaPredicted RBP12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 BACH2Q9BYV9 841 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 SEC63Q9UGP8 760 aaKnown RBP12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 BAG3O95817 575 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 CCDC152Q4G0S7 254 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 STK3Q13188 491 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 FAM13BQ9NYF5 915 aa12.81□□□□□ -0.36
CCDC144CP-202ENST00000433419 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 ZHX3Q9H4I2 956 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 SYCP2Q9BX26 1530 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 KCNA6P17658 529 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 CCDC173Q0VFZ6 552 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 GPS2Q13227 327 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 JAKMIP1Q96N16 626 aaKnown RBP12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 TTF1Q15361 905 aaPredicted RBP12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 PPIP5K1Q6PFW1 1433 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 PDRG1Q9NUG6 133 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 PIK3R4Q99570 1358 aa12.8□□□□□ -0.36
CCDC144CP-202ENST00000433419 ZNF592Q92610 1267 aa12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 LARP1BQ659C4 914 aaKnown RBP12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 CTCFLQ8NI51 663 aaPredicted RBP12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 F6X3S4 739 aa12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
CCDC144CP-202ENST00000433419 WDR78Q5VTH9 848 aa12.78□□□□□ -0.36
CCDC144CP-202ENST00000433419 GCP02774 474 aa12.78□□□□□ -0.36
CCDC144CP-202ENST00000433419 KRT85P78386 507 aa12.78□□□□□ -0.36
CCDC144CP-202ENST00000433419 PDCL3Q9H2J4 239 aa12.78□□□□□ -0.36
CCDC144CP-202ENST00000433419 CABP5Q9NP86 173 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms